Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is cat1 [H]
Identifier: 126447851
GI number: 126447851
Start: 1954534
End: 1956048
Strand: Reverse
Name: cat1 [H]
Synonym: BMA10247_A2021
Alternate gene names: 126447851
Gene position: 1956048-1954534 (Counterclockwise)
Preceding gene: 126447097
Following gene: 126445956
Centisome position: 83.14
GC content: 66.93
Gene sequence:
>1515_bases ATGCCAACCTCTCGTATCCTCGCCCCCAGCCTGCGCTCCCTCGTTCGCACCGCCGACGAGGCCGCCGCGCTGATCGGCCC GAACATGACCGTCGCGATGAGCGGCTTCACCGGCTCCGGCTATCCGAAGGCGGTGCCGGCCGCGCTCGCCGCGCGGATCG CGGCTTCCCACGCGCGCGGCGAAGATTTCCGCATCAACGTGCTGACGGGCGCGTCGACCGCGCCCGAGCTGGACGGCGCG CTCGCGAAGGCGGACGGTATCTCGATGCGGCTGCCGTACCAGTCCGATCCGACGCTGCGCGAGAAGATCAACGCGGGCGA GCTCGACTATCAGGACATCCACCTGAGCCACGTCGCGCAGTACGCGTGGTTCGGCCTGTTCGGCGAGCTGGACGTCGCGA TCGTCGAGGTCGCGGGCATTCGCGAGGACGGGCGCCTGATTCCGTCGGCGTCGGTCGGCAACAACAAGACGTGGCTCGAC CAGGCCAAGCGCGTGATCCTCGAGGTGAACGCGCGCCAGCCGCTCGGTCTCGACGGGATGCACGACATCTATTACGGCAC CGCGCTGCCGCCGAACCGCAAGCCGATTCCGCTCGTGAAGAGCGACGACCGGATCGGCGAGCCGTATCTGCGCTGCCCGG CCGAGAAGATCGTCGCGATCGTCGAGACCGACGCGCCGGACCGCAGCAACGCGTTCGCCGCGCCGGACGAGACCTCCAAG CAGATCGCCGGACTCCTGATCGATTTCCTGCGTCACGAGATCAAGCGCGGCCGTCTGCCCGAACACCTGCTGCCGCTGCA GTCCGGCGTCGGCAACATCACGAACGCGGTGCTCGCCGGCCTCGGCGAAGGCGGTTTCTCGAACCTGAGCGCGTATACGG AAGTGATTCAGGACGGCATGCTCGATCTGCTCGCGAACGGTACGCTGAGCTTCGCGTCGGCGACCGCGCTGTCGCTCAGC CCGGATGCGGTGAAGCGCTTCGCCGACGAGATCGATACGTTCCGCTCGAAGATCGTGCTGCGGCCGCAGGAAATCAGCAA CCATCCGGAGCTCGTGCGGCGCCTGGGCATCATCGCGATGAACGGGATGATCGAGGCCGATATCTACGGCAACGTGAACT CGACGCACGTGATGGGCACGAGGATTCAGAACGGGATCGGCGGCTCCGGCGATTTCGCGCGCAACGGCTATCTGTCGTGC TTCATGTCGGCGAGCACTGCCAAGGGCGGCGCCATTTCGCGGATCGTGCCGATGGCGAGCCACGTTGACCATACCGAGCA CGACGTCGCGGTCGTCGTGACCGAGCAGGGGCTCGCGGATCTGCGTGGACTGTCGCCGAAGCAGCGCGCGCGCAAGGTCA TCGCGAACTGCGCGCATCCCGATTACCGGCCGATGCTCGAAGACTACTTCGAGCGCGCGAGCCGCGAGAGCTTCGGCAAG CAGACGCCGCATCTGCTCGGCGAAGCGCTGTCGTGGCACGAGCGCTACGTGCGGACCGGATCGATGAAAGCCTGA
Upstream 100 bases:
>100_bases CCTCTTGCGATTGCCGCAGGCGCCGGGAGCGCGCGCCACTCCGGAGACACCCCTGCGGCGCAGCGTCGCCAGATCTACTA CAACCGTTCGACATTCAGCC
Downstream 100 bases:
>100_bases CGCCCGGCGCGGCAACGCACCGGGCGGGCGGCAGCGCCCGTTCGGACCGGCGATTGAAACGGCGCGGCACCGCAAGGTGG CCGCGCCGTTTCGTCAATGC
Product: coenzyme A transferase
Products: propionate; succinyl-CoA [C]
Alternate protein names: NA
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MPTSRILAPSLRSLVRTADEAAALIGPNMTVAMSGFTGSGYPKAVPAALAARIAASHARGEDFRINVLTGASTAPELDGA LAKADGISMRLPYQSDPTLREKINAGELDYQDIHLSHVAQYAWFGLFGELDVAIVEVAGIREDGRLIPSASVGNNKTWLD QAKRVILEVNARQPLGLDGMHDIYYGTALPPNRKPIPLVKSDDRIGEPYLRCPAEKIVAIVETDAPDRSNAFAAPDETSK QIAGLLIDFLRHEIKRGRLPEHLLPLQSGVGNITNAVLAGLGEGGFSNLSAYTEVIQDGMLDLLANGTLSFASATALSLS PDAVKRFADEIDTFRSKIVLRPQEISNHPELVRRLGIIAMNGMIEADIYGNVNSTHVMGTRIQNGIGGSGDFARNGYLSC FMSASTAKGGAISRIVPMASHVDHTEHDVAVVVTEQGLADLRGLSPKQRARKVIANCAHPDYRPMLEDYFERASRESFGK QTPHLLGEALSWHERYVRTGSMKA
Sequences:
>Translated_504_residues MPTSRILAPSLRSLVRTADEAAALIGPNMTVAMSGFTGSGYPKAVPAALAARIAASHARGEDFRINVLTGASTAPELDGA LAKADGISMRLPYQSDPTLREKINAGELDYQDIHLSHVAQYAWFGLFGELDVAIVEVAGIREDGRLIPSASVGNNKTWLD QAKRVILEVNARQPLGLDGMHDIYYGTALPPNRKPIPLVKSDDRIGEPYLRCPAEKIVAIVETDAPDRSNAFAAPDETSK QIAGLLIDFLRHEIKRGRLPEHLLPLQSGVGNITNAVLAGLGEGGFSNLSAYTEVIQDGMLDLLANGTLSFASATALSLS PDAVKRFADEIDTFRSKIVLRPQEISNHPELVRRLGIIAMNGMIEADIYGNVNSTHVMGTRIQNGIGGSGDFARNGYLSC FMSASTAKGGAISRIVPMASHVDHTEHDVAVVVTEQGLADLRGLSPKQRARKVIANCAHPDYRPMLEDYFERASRESFGK QTPHLLGEALSWHERYVRTGSMKA >Mature_503_residues PTSRILAPSLRSLVRTADEAAALIGPNMTVAMSGFTGSGYPKAVPAALAARIAASHARGEDFRINVLTGASTAPELDGAL AKADGISMRLPYQSDPTLREKINAGELDYQDIHLSHVAQYAWFGLFGELDVAIVEVAGIREDGRLIPSASVGNNKTWLDQ AKRVILEVNARQPLGLDGMHDIYYGTALPPNRKPIPLVKSDDRIGEPYLRCPAEKIVAIVETDAPDRSNAFAAPDETSKQ IAGLLIDFLRHEIKRGRLPEHLLPLQSGVGNITNAVLAGLGEGGFSNLSAYTEVIQDGMLDLLANGTLSFASATALSLSP DAVKRFADEIDTFRSKIVLRPQEISNHPELVRRLGIIAMNGMIEADIYGNVNSTHVMGTRIQNGIGGSGDFARNGYLSCF MSASTAKGGAISRIVPMASHVDHTEHDVAVVVTEQGLADLRGLSPKQRARKVIANCAHPDYRPMLEDYFERASRESFGKQ TPHLLGEALSWHERYVRTGSMKA
Specific function: Forms succinyl-CoA from succinate and acetyl-CoA [H]
COG id: COG0427
COG function: function code C; Acetyl-CoA hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acetyl-CoA hydrolase/transferase family [H]
Homologues:
Organism=Escherichia coli, GI1789287, Length=487, Percent_Identity=48.2546201232033, Blast_Score=455, Evalue=1e-129, Organism=Caenorhabditis elegans, GI17538151, Length=489, Percent_Identity=24.7443762781186, Blast_Score=90, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319456, Length=513, Percent_Identity=43.859649122807, Blast_Score=409, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003702 - InterPro: IPR006472 - InterPro: IPR017821 [H]
Pfam domain/function: PF02550 AcetylCoA_hydro; PF04223 CitF [H]
EC number: NA
Molecular weight: Translated: 54378; Mature: 54246
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTSRILAPSLRSLVRTADEAAALIGPNMTVAMSGFTGSGYPKAVPAALAARIAASHARG CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC EDFRINVLTGASTAPELDGALAKADGISMRLPYQSDPTLREKINAGELDYQDIHLSHVAQ CCEEEEEEECCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHH YAWFGLFGELDVAIVEVAGIREDGRLIPSASVGNNKTWLDQAKRVILEVNARQPLGLDGM HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCCCCC HDIYYGTALPPNRKPIPLVKSDDRIGEPYLRCPAEKIVAIVETDAPDRSNAFAAPDETSK HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEEEEEECCCCCCCCCCCCCCHHHH QIAGLLIDFLRHEIKRGRLPEHLLPLQSGVGNITNAVLAGLGEGGFSNLSAYTEVIQDGM HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LDLLANGTLSFASATALSLSPDAVKRFADEIDTFRSKIVLRPQEISNHPELVRRLGIIAM HHHHHCCCCHHHHCEEECCCHHHHHHHHHHHHHHHHHEEECHHHHCCCHHHHHHHHHHHC NGMIEADIYGNVNSTHVMGTRIQNGIGGSGDFARNGYLSCFMSASTAKGGAISRIVPMAS CCEEEEEEECCCCCCEEEHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH HVDHTEHDVAVVVTEQGLADLRGLSPKQRARKVIANCAHPDYRPMLEDYFERASRESFGK HCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC QTPHLLGEALSWHERYVRTGSMKA CCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PTSRILAPSLRSLVRTADEAAALIGPNMTVAMSGFTGSGYPKAVPAALAARIAASHARG CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCC EDFRINVLTGASTAPELDGALAKADGISMRLPYQSDPTLREKINAGELDYQDIHLSHVAQ CCEEEEEEECCCCCCCCCCHHHHCCCCEEECCCCCCCHHHHHCCCCCCCHHHHHHHHHHH YAWFGLFGELDVAIVEVAGIREDGRLIPSASVGNNKTWLDQAKRVILEVNARQPLGLDGM HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHCEEEEEECCCCCCCCCCC HDIYYGTALPPNRKPIPLVKSDDRIGEPYLRCPAEKIVAIVETDAPDRSNAFAAPDETSK HHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHEEEEEECCCCCCCCCCCCCCHHHH QIAGLLIDFLRHEIKRGRLPEHLLPLQSGVGNITNAVLAGLGEGGFSNLSAYTEVIQDGM HHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LDLLANGTLSFASATALSLSPDAVKRFADEIDTFRSKIVLRPQEISNHPELVRRLGIIAM HHHHHCCCCHHHHCEEECCCHHHHHHHHHHHHHHHHHEEECHHHHCCCHHHHHHHHHHHC NGMIEADIYGNVNSTHVMGTRIQNGIGGSGDFARNGYLSCFMSASTAKGGAISRIVPMAS CCEEEEEEECCCCCCEEEHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHH HVDHTEHDVAVVVTEQGLADLRGLSPKQRARKVIANCAHPDYRPMLEDYFERASRESFGK HCCCCCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC QTPHLLGEALSWHERYVRTGSMKA CCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: propionyl-CoA; succinate [C]
Specific reaction: propionyl-CoA + succinate = propionate + succinyl-CoA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550525 [H]