Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
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Accession | NC_009079 |
Length | 2,352,693 |
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The map label for this gene is cmlA [H]
Identifier: 126446263
GI number: 126446263
Start: 1967187
End: 1968398
Strand: Reverse
Name: cmlA [H]
Synonym: BMA10247_A2033
Alternate gene names: 126446263
Gene position: 1968398-1967187 (Counterclockwise)
Preceding gene: 126447618
Following gene: 126447097
Centisome position: 83.67
GC content: 67.82
Gene sequence:
>1212_bases ATGAACACGACCGAAACAAACACATTGTCCGACCGGGGCTGGCTAAGCCTGCTGATGCTCGTCGTCTGCTTGCCGCGCAT GACGATCGACGCATATCTGCCGTCGCTGCCCGCGATGGCGGACGCGCTTCACGGCACCGACGCGCAGATGCAACTGACGC TCACGATGTACATGGCCGGCTACGCACTGTCGATGCTGCTATCCGGGCCGTTGTCCGACCGTTACGGGCGCAGGCCGGTG CTGCTCGCCGGCATGCTCGTGTATCTCGGCGCGAGCGTCGCATGCGCGACGGCGACGAGCGTTCAGGGCATCGTCGTCGC GCGGATCGGCCAGGCGCTGGGCGGCTGCTGCGGCACCGTGATCGGCCGCGTGATCGTCCGCGAACGCTTCGGTACGGCGA TGCAAGCGGCGATGCTCAGCCGGATATCGGCGGGCATGGCGTTGTCGCCCGTCGTCGCGCCGCTTGCCGGCCACGTCGTC GCGCAGTGGCTCGGCTGGCGCGGCGTTTTCGCGTTGCTCGCGTTCGGCGGCGGCGCCGCCGCGCTGATGGTGCATCGCTT TCTGCCGGAGACCCGCGTGCGCGCGGCGGCGAGCGAACGCGGCGCGGGCCTGGCGAAGACTTACCTGTCGCTGCTTCGCG ACCGCCGGTTCGTGCGTTACTCACTCGCGATCGGCTTCGTCTATTGCACGTATTTTCCGTTCATCGCCGAATCGTCTGCG CTGTTTCAACGCACGCTTCGCGCCTCCGGCGCTGTCTATGCGGCGATATTCGGGATCACGGTGCTCGGCTACCTGATCGG CTCGAGCGTGTTTCGCCGGGCGAGCGGCCGGTTCGGAATCGATGCGATCATCGCGTCGGCCGCCTTCGTCAATCTAGTCG GCGCGGCCGCGCTGTGGATCGGGACGTCGGTCGCGCCGCCGAGCGTCTGGTCGATCGCGTTGCCGATGTTCGTCGTCATG GTGTCGGTCGGCGTTTCGATCCCGGCGTGCCAGTTCGCGGTGCTGCAGCCGTTCGCGAAGCTCGCGGGCACCGCTTCCGG ATTGTTCTTCTTCATTCAGATGGCGATGACGGCCGGGTGCGGCGGGATGCTGAGCCGGCTGTCCGACGGCTCCGCGCGGC CGATGGCCGTCGTCACCGCCGCATCGAGCGCGGCGTTCATGGCCGTCGTCATGCTCGTGCGAACGCGCGGCGTGAACGGT CGGCGCGGTTGA
Upstream 100 bases:
>100_bases GGTCTATTCAACATTCGAACAAGTGGTTCTTCGGCTTATACCACATTGCGTTTAGATTCCGGCTTGCGCCAATCGATCCA GGCCGCGAGAACCTCGCCGA
Downstream 100 bases:
>100_bases GCGGCGTCGGCCTGCCGCTGTTCGCGATCGCGCCCGAGAGCGGATGCCTTGCACGGCCGCCGCTTCCTGCCGCGAGCGGC GTGATCCTGCCGGCATTGCC
Product: Bcr/CflA subfamily drug resistance transporter
Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MNTTETNTLSDRGWLSLLMLVVCLPRMTIDAYLPSLPAMADALHGTDAQMQLTLTMYMAGYALSMLLSGPLSDRYGRRPV LLAGMLVYLGASVACATATSVQGIVVARIGQALGGCCGTVIGRVIVRERFGTAMQAAMLSRISAGMALSPVVAPLAGHVV AQWLGWRGVFALLAFGGGAAALMVHRFLPETRVRAAASERGAGLAKTYLSLLRDRRFVRYSLAIGFVYCTYFPFIAESSA LFQRTLRASGAVYAAIFGITVLGYLIGSSVFRRASGRFGIDAIIASAAFVNLVGAAALWIGTSVAPPSVWSIALPMFVVM VSVGVSIPACQFAVLQPFAKLAGTASGLFFFIQMAMTAGCGGMLSRLSDGSARPMAVVTAASSAAFMAVVMLVRTRGVNG RRG
Sequences:
>Translated_403_residues MNTTETNTLSDRGWLSLLMLVVCLPRMTIDAYLPSLPAMADALHGTDAQMQLTLTMYMAGYALSMLLSGPLSDRYGRRPV LLAGMLVYLGASVACATATSVQGIVVARIGQALGGCCGTVIGRVIVRERFGTAMQAAMLSRISAGMALSPVVAPLAGHVV AQWLGWRGVFALLAFGGGAAALMVHRFLPETRVRAAASERGAGLAKTYLSLLRDRRFVRYSLAIGFVYCTYFPFIAESSA LFQRTLRASGAVYAAIFGITVLGYLIGSSVFRRASGRFGIDAIIASAAFVNLVGAAALWIGTSVAPPSVWSIALPMFVVM VSVGVSIPACQFAVLQPFAKLAGTASGLFFFIQMAMTAGCGGMLSRLSDGSARPMAVVTAASSAAFMAVVMLVRTRGVNG RRG >Mature_403_residues MNTTETNTLSDRGWLSLLMLVVCLPRMTIDAYLPSLPAMADALHGTDAQMQLTLTMYMAGYALSMLLSGPLSDRYGRRPV LLAGMLVYLGASVACATATSVQGIVVARIGQALGGCCGTVIGRVIVRERFGTAMQAAMLSRISAGMALSPVVAPLAGHVV AQWLGWRGVFALLAFGGGAAALMVHRFLPETRVRAAASERGAGLAKTYLSLLRDRRFVRYSLAIGFVYCTYFPFIAESSA LFQRTLRASGAVYAAIFGITVLGYLIGSSVFRRASGRFGIDAIIASAAFVNLVGAAALWIGTSVAPPSVWSIALPMFVVM VSVGVSIPACQFAVLQPFAKLAGTASGLFFFIQMAMTAGCGGMLSRLSDGSARPMAVVTAASSAAFMAVVMLVRTRGVNG RRG
Specific function: Appears to provoke a reduction of the content of the major porins ompA and ompC [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Bcr/CmlA family [H]
Homologues:
Organism=Escherichia coli, GI1788509, Length=363, Percent_Identity=26.4462809917355, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1790146, Length=233, Percent_Identity=30.0429184549356, Blast_Score=104, Evalue=9e-24, Organism=Escherichia coli, GI87082312, Length=323, Percent_Identity=26.3157894736842, Blast_Score=100, Evalue=2e-22, Organism=Escherichia coli, GI48994889, Length=327, Percent_Identity=25.9938837920489, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787065, Length=256, Percent_Identity=29.6875, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790794, Length=282, Percent_Identity=27.3049645390071, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787880, Length=241, Percent_Identity=26.9709543568465, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319480, Length=191, Percent_Identity=27.7486910994764, Blast_Score=78, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324264, Length=166, Percent_Identity=30.1204819277108, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004812 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR004734 - InterPro: IPR001411 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42273; Mature: 42273
Theoretical pI: Translated: 10.85; Mature: 10.85
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTETNTLSDRGWLSLLMLVVCLPRMTIDAYLPSLPAMADALHGTDAQMQLTLTMYMAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHH YALSMLLSGPLSDRYGRRPVLLAGMLVYLGASVACATATSVQGIVVARIGQALGGCCGTV HHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRVIVRERFGTAMQAAMLSRISAGMALSPVVAPLAGHVVAQWLGWRGVFALLAFGGGAA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALMVHRFLPETRVRAAASERGAGLAKTYLSLLRDRRFVRYSLAIGFVYCTYFPFIAESSA HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LFQRTLRASGAVYAAIFGITVLGYLIGSSVFRRASGRFGIDAIIASAAFVNLVGAAALWI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GTSVAPPSVWSIALPMFVVMVSVGVSIPACQFAVLQPFAKLAGTASGLFFFIQMAMTAGC CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC GGMLSRLSDGSARPMAVVTAASSAAFMAVVMLVRTRGVNGRRG HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNTTETNTLSDRGWLSLLMLVVCLPRMTIDAYLPSLPAMADALHGTDAQMQLTLTMYMAG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHH YALSMLLSGPLSDRYGRRPVLLAGMLVYLGASVACATATSVQGIVVARIGQALGGCCGTV HHHHHHHCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGRVIVRERFGTAMQAAMLSRISAGMALSPVVAPLAGHVVAQWLGWRGVFALLAFGGGAA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH ALMVHRFLPETRVRAAASERGAGLAKTYLSLLRDRRFVRYSLAIGFVYCTYFPFIAESSA HHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LFQRTLRASGAVYAAIFGITVLGYLIGSSVFRRASGRFGIDAIIASAAFVNLVGAAALWI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH GTSVAPPSVWSIALPMFVVMVSVGVSIPACQFAVLQPFAKLAGTASGLFFFIQMAMTAGC CCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC GGMLSRLSDGSARPMAVVTAASSAAFMAVVMLVRTRGVNGRRG HHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1648560; 1658833 [H]