| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is 126207840
Identifier: 126207840
GI number: 126207840
Start: 399116
End: 399502
Strand: Reverse
Name: 126207840
Synonym: APL_0356
Alternate gene names: NA
Gene position: 399502-399116 (Counterclockwise)
Preceding gene: 126207841
Following gene: 126207836
Centisome position: 17.56
GC content: 43.93
Gene sequence:
>387_bases ATGAAAAAGGCAACATGGACGATCGCAATTACGATTTCATTCCTACTTTCCGCTTGTGCCGTCACGCCGCAGCAACAGGC ACAACGCCAAGCTCGGCAAATTAAAGCGCAACAAGATTTATCGGTAGCGCTTGCCAAACAATGTGATGTGGAAACGGCTG AGATGATGGCGCAATTATATAATCCGCCAATTGCTCAAACCGAGAAAGAAAAAGCCGAGTTTACTCAGCGTTATCAGAAA AAAGTCAATGATCCGCTGTTTCAGGCTTGTCATAAACTCGCTTGGGAAAACTATAAACACCAAGAAGAGTTAAAACAAAT ACAGCGTTATTACGATTTTGGGCGCACTCGCTTCCATCCTTGGCATTACTGTTATGCCTGTTGGTAA
Upstream 100 bases:
>100_bases GAAGAATTATCCGAAGCGGAAGTCGAATAATACTATTGATTTAAGCTCTTTGAGTGATAAACTCAGAGCGCTTAATTTTT AAGCGCAATAGGAGGCTAAA
Downstream 100 bases:
>100_bases AAAAAGCGGACACTTAAGTGTCCGCTTTTCCGTTTTTACATAAAATCAGATCGCTTGTTTCGACTTATTTTTACATAGTA GGTAATAAGCTATAGAAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MKKATWTIAITISFLLSACAVTPQQQAQRQARQIKAQQDLSVALAKQCDVETAEMMAQLYNPPIAQTEKEKAEFTQRYQK KVNDPLFQACHKLAWENYKHQEELKQIQRYYDFGRTRFHPWHYCYACW
Sequences:
>Translated_128_residues MKKATWTIAITISFLLSACAVTPQQQAQRQARQIKAQQDLSVALAKQCDVETAEMMAQLYNPPIAQTEKEKAEFTQRYQK KVNDPLFQACHKLAWENYKHQEELKQIQRYYDFGRTRFHPWHYCYACW >Mature_128_residues MKKATWTIAITISFLLSACAVTPQQQAQRQARQIKAQQDLSVALAKQCDVETAEMMAQLYNPPIAQTEKEKAEFTQRYQK KVNDPLFQACHKLAWENYKHQEELKQIQRYYDFGRTRFHPWHYCYACW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15191; Mature: 15191
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKATWTIAITISFLLSACAVTPQQQAQRQARQIKAQQDLSVALAKQCDVETAEMMAQLY CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NPPIAQTEKEKAEFTQRYQKKVNDPLFQACHKLAWENYKHQEELKQIQRYYDFGRTRFHP CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC WHYCYACW CCEEEECC >Mature Secondary Structure MKKATWTIAITISFLLSACAVTPQQQAQRQARQIKAQQDLSVALAKQCDVETAEMMAQLY CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH NPPIAQTEKEKAEFTQRYQKKVNDPLFQACHKLAWENYKHQEELKQIQRYYDFGRTRFHP CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC WHYCYACW CCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA