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The map label for this gene is 126207705

Identifier: 126207705

GI number: 126207705

Start: 238874

End: 239833

Strand: Reverse

Name: 126207705

Synonym: APL_0217

Alternate gene names: NA

Gene position: 239833-238874 (Counterclockwise)

Preceding gene: 126207706

Following gene: 126207704

Centisome position: 10.54

GC content: 38.02

Gene sequence:

>960_bases
ATGAATTATCCAAACTTTTATCTGCTGTTTGATCATGTTGAAATTCAAGCGGCAAACACGATTTCCAGCCCGATCACGTA
TGGTTTTCCTTCACTCACCGGTTTTACCGGTGCGATTCATGCACTTAGCCGTAAATTATTTCCCCAACAAGTGGAATTAG
GCGGTGTGATGATTGCTTGTCATGATTATCAAATATTAGGTTATAAAAATAGTGATTTTTCAGATTTAACCTTTAATCAA
ACACGTAACCCTCTCAAAAAAAATGGCGATTCGCCTTCCATTATCGAGGAAGGAAAAATTCACTTGGATATTTCATTAGT
CGTTGAAATGGAAGTTAAAGATCCGGAGCTTTACTATGCATTAAATAGTCAGGACTCGGAACAGAAAACACAATTTCTTG
AACATTGCAAAAAATTGCTTATGCAACAACGAATTGCCGGTGGTAGTGTTTTTCAAATTGAAAATGTTGAACTCTTTAAT
TTAAGTGATACGAAGGAAATAAAACTTGCTCTTATGCCAGCTTTCGTTCTCATGGATGCAAAGCAAACCTTAGCGGATAT
TACTCAGTCATTACAAAGCGGAATCTCAAATAATGAAATAACGATTTATCCTGCTACTCCAAATGCGAATGCGCTGGATG
CGTTACTTGAGGTAGCAACATTACACCATATTCCATTATCCGAACACGCAACTTCCCAAGAATGGGAAACCTTTAATGTC
AATCAAGGAAAAGGATGGCTAGTACCGATTCCTGTCGGTTACCAAGCTATTTCACCGCTATTTACTGCCGGTGAAATGCA
AAATTGCCGTGTGACTGAATACCCAAGCCAATATGTTGAAACGGTTTACAGCTTAGGAAAATGGGTTTTCCCTTTTAGTT
TACCTGATGATTTATCGCAATGTTTTTGGCACTACAACACCCCGCAAGATAATCTCTATTTAATTACCCAAGGAGCATAA

Upstream 100 bases:

>100_bases
AACATCAGGACGATTTTACCGCTACGGAATATAACGAATGGCGTAAATATTTCCGAAAAAAATTACATCGACAATTACGC
TGCTTATATAAGGAAGTATT

Downstream 100 bases:

>100_bases
TATGACAAAATTAACTACAGCATCAGTTTTAGCATTTGAGCGTAAACTTGATATTTCCGATGCTACTTTTACCCAAAAAA
ATAGCACGAGTAGCGAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csy2 Family Protein; Csy2 Family CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MNYPNFYLLFDHVEIQAANTISSPITYGFPSLTGFTGAIHALSRKLFPQQVELGGVMIACHDYQILGYKNSDFSDLTFNQ
TRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYALNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFN
LSDTKEIKLALMPAFVLMDAKQTLADITQSLQSGISNNEITIYPATPNANALDALLEVATLHHIPLSEHATSQEWETFNV
NQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQCFWHYNTPQDNLYLITQGA

Sequences:

>Translated_319_residues
MNYPNFYLLFDHVEIQAANTISSPITYGFPSLTGFTGAIHALSRKLFPQQVELGGVMIACHDYQILGYKNSDFSDLTFNQ
TRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYALNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFN
LSDTKEIKLALMPAFVLMDAKQTLADITQSLQSGISNNEITIYPATPNANALDALLEVATLHHIPLSEHATSQEWETFNV
NQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQCFWHYNTPQDNLYLITQGA
>Mature_319_residues
MNYPNFYLLFDHVEIQAANTISSPITYGFPSLTGFTGAIHALSRKLFPQQVELGGVMIACHDYQILGYKNSDFSDLTFNQ
TRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYALNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFN
LSDTKEIKLALMPAFVLMDAKQTLADITQSLQSGISNNEITIYPATPNANALDALLEVATLHHIPLSEHATSQEWETFNV
NQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQCFWHYNTPQDNLYLITQGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35869; Mature: 35869

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYPNFYLLFDHVEIQAANTISSPITYGFPSLTGFTGAIHALSRKLFPQQVELGGVMIAC
CCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
HDYQILGYKNSDFSDLTFNQTRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYA
ECEEEEEECCCCCCCCCHHHCCCHHHHCCCCCCEECCCEEEEEEEEEEEEEECCCEEEEE
LNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFNLSDTKEIKLALMPAFVLMDA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCCCEEEEEEEHHHHHHHH
KQTLADITQSLQSGISNNEITIYPATPNANALDALLEVATLHHIPLSEHATSQEWETFNV
HHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
NQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQ
CCCCCEEEECCCCHHHHCCHHCCCCCCCCEEECCCHHHHHHHHHHCCEEECCCCHHHHHH
CFWHYNTPQDNLYLITQGA
HHEECCCCCCCEEEEEECC
>Mature Secondary Structure
MNYPNFYLLFDHVEIQAANTISSPITYGFPSLTGFTGAIHALSRKLFPQQVELGGVMIAC
CCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEE
HDYQILGYKNSDFSDLTFNQTRNPLKKNGDSPSIIEEGKIHLDISLVVEMEVKDPELYYA
ECEEEEEECCCCCCCCCHHHCCCHHHHCCCCCCEECCCEEEEEEEEEEEEEECCCEEEEE
LNSQDSEQKTQFLEHCKKLLMQQRIAGGSVFQIENVELFNLSDTKEIKLALMPAFVLMDA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECEEEEECCCCCEEEEEEEHHHHHHHH
KQTLADITQSLQSGISNNEITIYPATPNANALDALLEVATLHHIPLSEHATSQEWETFNV
HHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEC
NQGKGWLVPIPVGYQAISPLFTAGEMQNCRVTEYPSQYVETVYSLGKWVFPFSLPDDLSQ
CCCCCEEEECCCCHHHHCCHHCCCCCCCCEEECCCHHHHHHHHHHCCEEECCCCHHHHHH
CFWHYNTPQDNLYLITQGA
HHEECCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA