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The map label for this gene is 126207706

Identifier: 126207706

GI number: 126207706

Start: 239830

End: 241179

Strand: Reverse

Name: 126207706

Synonym: APL_0218

Alternate gene names: NA

Gene position: 241179-239830 (Counterclockwise)

Preceding gene: 126207716

Following gene: 126207705

Centisome position: 10.6

GC content: 38.96

Gene sequence:

>1350_bases
ATGATAACTCCTTTACAAATTAGGGCTAAAATCATTGATTTCCTACAAGCTCAACACCTTAAAAAATCTGAAAATGATTA
TAAAAAACTAGAAAAGGCGACCGAACCGGAAGAGATTGCCAAAATAAAGGCTGAAATTAGCAAAAGCGAAGAAAAGTATC
GGCTAGATACTTGGCTTCATATCGCAGCAACCGAAATGGCACAGCAACTAAAATTTGGTACTCATATTGCTAAAGGAATC
CACCCCGATGCTAAAGGCAATAACATAAACTTTCGGGCTAATTTGAATCTCCCTGCGACTTTAGTTGGTTCTCAATTGAT
CGATAAACTTGTTTTAGATGCTAACGGTAATGCTGCAGCACTCCCTCTCGCTGCATTTTTCGATATTATGGTTGATGAAG
TAAATAAACGGACTTTAAAAGACCTATTGCTAACAGATGAGCCTTGTTTAGACGGCTGCTTTAGTGATGACCTTTCGCTT
TCGGCACAATATAAAATCGCTTTTCAAATGGCATTAAAAGGTAATTTAAACTCACCGGAAACACATGAGCGAAATAAGCA
AGTTTTATGGGTAAACAGCAGTTCAGCTATTGAGGATAATCACTATACTTGCCTTATTCCGCTTTATCCATCTTCCTTCA
CTCACGCCATTTATAATAAGCTGAATCAAGCCCGTTTTTCTGAGGAAAATAAACAAGCAAGGGAAAATCGTTATAAAAAT
AAAGCACAAAATCCCTATATATCTATTCCTCATTTAGCAGTCACTAAACTAGGTGGAACAAAGCCGCAGAACGTTAGCTT
ATTAACCAGTAAACAAGGTGGCAGAAACTATTTACTTCCCTCTCTTCCTCCCATTTTTTCCAAAGGCGAACTTCGCTTAA
CTAATGCACAAAATACGATCTTCAACGATCGCTTAGCCTATGTCTGTCGTGCCGGTTTATACCAGCTATATCAAGCAGTT
GCAGATTCTAGGAAGAATTATATTGTTCGAGTTCCGCGTGCCGAAGCCGTAAACTTAATTGTTCAAATGGTACTGCAACA
AGCTTATAAGTTACAGAAACGTACTGCCGGTTGGAGCCGAGACTACCAACTGGCTTGGTGCGAAAAATATTGGCTTGATC
CGCAACGCGCTAAGCTAAACGGAGAAGAACAATTTCATTCGGCTTTAACTCAACAAGACTGGATTTCTGAAGTAGAACAA
CGCTTTGCCGCTTGGCTCAATGCGTTGCTCAAAAAACGCTTTCCAAAACATCAGGACGATTTTACCGCTACGGAATATAA
CGAATGGCGTAAATATTTCCGAAAAAAATTACATCGACAATTACGCTGCTTATATAAGGAAGTATTATGA

Upstream 100 bases:

>100_bases
CATAAGTATCAGCTATTTAATTTTAATCTTTTAATTAAATTGAGAATTTTTAATCAAGCAATATACTTATAGGCAAATTA
AAAACAAAAGAGGTCAAACT

Downstream 100 bases:

>100_bases
ATTATCCAAACTTTTATCTGCTGTTTGATCATGTTGAAATTCAAGCGGCAAACACGATTTCCAGCCCGATCACGTATGGT
TTTCCTTCACTCACCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csy1 Family Protein; Csy1 Family CRISPR-Associated Protein

Number of amino acids: Translated: 449; Mature: 449

Protein sequence:

>449_residues
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLHIAATEMAQQLKFGTHIAKGI
HPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAALPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDLSL
SAQYKIAFQMALKGNLNSPETHERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKN
KAQNPYISIPHLAVTKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFSKGELRLTNAQNTIFNDRLAYVCRAGLYQLYQAV
ADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSRDYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQ
RFAAWLNALLKKRFPKHQDDFTATEYNEWRKYFRKKLHRQLRCLYKEVL

Sequences:

>Translated_449_residues
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLHIAATEMAQQLKFGTHIAKGI
HPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAALPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDLSL
SAQYKIAFQMALKGNLNSPETHERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKN
KAQNPYISIPHLAVTKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFSKGELRLTNAQNTIFNDRLAYVCRAGLYQLYQAV
ADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSRDYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQ
RFAAWLNALLKKRFPKHQDDFTATEYNEWRKYFRKKLHRQLRCLYKEVL
>Mature_449_residues
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLHIAATEMAQQLKFGTHIAKGI
HPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAALPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDLSL
SAQYKIAFQMALKGNLNSPETHERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKN
KAQNPYISIPHLAVTKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFSKGELRLTNAQNTIFNDRLAYVCRAGLYQLYQAV
ADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSRDYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQ
RFAAWLNALLKKRFPKHQDDFTATEYNEWRKYFRKKLHRQLRCLYKEVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51733; Mature: 51733

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLH
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
IAATEMAQQLKFGTHIAKGIHPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHH
LPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDLSLSAQYKIAFQMALKGNLNSPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
THERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKN
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KAQNPYISIPHLAVTKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFSKGELRLTNAQNTI
HCCCCCEECCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH
FNDRLAYVCRAGLYQLYQAVADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSR
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQRFAAWLNALLKKRFPKHQDD
CCEEEHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FTATEYNEWRKYFRKKLHRQLRCLYKEVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MITPLQIRAKIIDFLQAQHLKKSENDYKKLEKATEPEEIAKIKAEISKSEEKYRLDTWLH
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHH
IAATEMAQQLKFGTHIAKGIHPDAKGNNINFRANLNLPATLVGSQLIDKLVLDANGNAAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCHH
LPLAAFFDIMVDEVNKRTLKDLLLTDEPCLDGCFSDDLSLSAQYKIAFQMALKGNLNSPE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCC
THERNKQVLWVNSSSAIEDNHYTCLIPLYPSSFTHAIYNKLNQARFSEENKQARENRYKN
CCCCCCEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
KAQNPYISIPHLAVTKLGGTKPQNVSLLTSKQGGRNYLLPSLPPIFSKGELRLTNAQNTI
HCCCCCEECCCHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCCCHH
FNDRLAYVCRAGLYQLYQAVADSRKNYIVRVPRAEAVNLIVQMVLQQAYKLQKRTAGWSR
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DYQLAWCEKYWLDPQRAKLNGEEQFHSALTQQDWISEVEQRFAAWLNALLKKRFPKHQDD
CCEEEHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FTATEYNEWRKYFRKKLHRQLRCLYKEVL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA