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The map label for this gene is 126207704

Identifier: 126207704

GI number: 126207704

Start: 237877

End: 238872

Strand: Reverse

Name: 126207704

Synonym: APL_0216

Alternate gene names: NA

Gene position: 238872-237877 (Counterclockwise)

Preceding gene: 126207705

Following gene: 126207703

Centisome position: 10.5

GC content: 39.26

Gene sequence:

>996_bases
ATGACAAAATTAACTACAGCATCAGTTTTAGCATTTGAGCGTAAACTTGATATTTCCGATGCTACTTTTACCCAAAAAAA
TAGCACGAGTAGCGAACCTGAAATTGCGGTTACGATTCGAGAAAAATCAGTAAGAGGGACTATTTCAAATCGCTTAAAAA
ATGCCTTAGCCAATGATCCTGCCAAATTAGATGCTGAAATTGAAAAAGCCAATTTACAGCGCGTTGATGTCGCAACACTA
AATGATGACTACGATACCTTAGTTGCCAGATTTACCTGTAAAGTTTTACCTTTTGAAGGTAAACCTAATGTTTGTAATGA
TCCTGAATATCAAGCGAAACTGTTATCAACCATTCAAAATTACTTAACCGCTCACGGCATGTCGGAATTAGCCAAAAGAT
ATGCGACTAATTTAGCAAATGCTCGCTGGTTATGGCGTAATCGTATCAGCGCAGAAACTATCCAAGTCAGTATAAAGGTC
GCGGATGATGTGATTGTTTTCGAAAATGCCAAACAACTGCCGCTTAACAGCTTTGAACAAGCGGATGAAAAACTTCAAAA
AATTGCAAGTTATATTGAAAAAGGTTTGAAAGGTGAAGAATTCATCATTTTGGAAGTTGAAGCACAAGCTAAAATGGGGC
GTGGTCAGGAAGTATATCCATCGCAAGAATTGGTGTTAGATACCGGAACTCGCAAAAGTAAAATTTTGTATGAAATCAAT
CATAAAGCCGGAATGCATTCCCAAAAAATCGGCAATGCGATTCGTACCATTGATACTTGGTATGCAGAAAATGCCCCTTT
CCCGATTGCAGCCGAACCTTATGGCGCAGTCACTAATCTTGGCACGGCGTTCCGCCAGCCAAAAGAAAAAATCGATTTCT
ATACACTATTCGATAACTGGGTATTAAAAGACGTAGCACCGGAACTTGAACAACAGCACTACGTTATTAGCGTATTAATT
CGAGGTGGCGTATTTGGCGCAAGCGGTAAGGAATAA

Upstream 100 bases:

>100_bases
TGGGTTTTCCCTTTTAGTTTACCTGATGATTTATCGCAATGTTTTTGGCACTACAACACCCCGCAAGATAATCTCTATTT
AATTACCCAAGGAGCATAAT

Downstream 100 bases:

>100_bases
ATATGAGTGAATTAACACATTACATTGAGCTAAAAGCAATTCCCCAAGTAGATATACTTCAAACGGATGTAATTGCACAT
GGCTTGCAAATTTTGCATAA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Csy3 Family Protein; Csy3 Family CRISPR-Associated Protein; CRISPR-Associated Protein; CRISPR-Associated Protein Family Protein; Crispr-Associated Protein Csy3 Family; Crispr-Associated Protein; CRISPR-Associated Cas5e Family Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDPAKLDAEIEKANLQRVDVATL
NDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQNYLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKV
ADDVIVFENAKQLPLNSFEQADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEIN
HKAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNWVLKDVAPELEQQHYVISVLI
RGGVFGASGKE

Sequences:

>Translated_331_residues
MTKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDPAKLDAEIEKANLQRVDVATL
NDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQNYLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKV
ADDVIVFENAKQLPLNSFEQADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEIN
HKAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNWVLKDVAPELEQQHYVISVLI
RGGVFGASGKE
>Mature_330_residues
TKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDPAKLDAEIEKANLQRVDVATLN
DDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQNYLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKVA
DDVIVFENAKQLPLNSFEQADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEINH
KAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNWVLKDVAPELEQQHYVISVLIR
GGVFGASGKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37064; Mature: 36933

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDP
CCCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
AKLDAEIEKANLQRVDVATLNDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQN
HHCCCHHHHCCCEEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH
YLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKVADDVIVFENAKQLPLNSFEQ
HHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEEEECEEEEECCCCCCCCCHHHH
ADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEIN
HHHHHHHHHHHHHHCCCCCEEEEEEEECHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
HKAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNW
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCEEEEHHHH
VLKDVAPELEQQHYVISVLIRGGVFGASGKE
HHHHHHHHHHHHHEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
TKLTTASVLAFERKLDISDATFTQKNSTSSEPEIAVTIREKSVRGTISNRLKNALANDP
CCCCHHHHHHHHHHCCCCCCEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCC
AKLDAEIEKANLQRVDVATLNDDYDTLVARFTCKVLPFEGKPNVCNDPEYQAKLLSTIQN
HHCCCHHHHCCCEEEEEEECCCCHHHHHHHHEEEEEECCCCCCCCCCHHHHHHHHHHHHH
YLTAHGMSELAKRYATNLANARWLWRNRISAETIQVSIKVADDVIVFENAKQLPLNSFEQ
HHHHCCHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEEEEEECEEEEECCCCCCCCCHHHH
ADEKLQKIASYIEKGLKGEEFIILEVEAQAKMGRGQEVYPSQELVLDTGTRKSKILYEIN
HHHHHHHHHHHHHHCCCCCEEEEEEEECHHHCCCCCCCCCCCEEEEECCCCCCEEEEEEC
HKAGMHSQKIGNAIRTIDTWYAENAPFPIAAEPYGAVTNLGTAFRQPKEKIDFYTLFDNW
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCHHHHCCEEEEHHHH
VLKDVAPELEQQHYVISVLIRGGVFGASGKE
HHHHHHHHHHHHHEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA