Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
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Accession | NC_009053 |
Length | 2,274,482 |
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The map label for this gene is proQ [H]
Identifier: 126207607
GI number: 126207607
Start: 135550
End: 136098
Strand: Direct
Name: proQ [H]
Synonym: APL_0119
Alternate gene names: 126207607
Gene position: 135550-136098 (Clockwise)
Preceding gene: 126207605
Following gene: 126207608
Centisome position: 5.96
GC content: 41.35
Gene sequence:
>549_bases ATGTCAGAACAACAAGTAAAAATTCAAAATGGCAATAAAACTAATCCTAGCGTAAAAGAAGTGATTACGTATTTAGCGGA GAAGTTTCCACTTTGTTTTAGTGTTGAAGGAGAAGCAAAGCCACTCAAAGTCGGACTTTTCCAAGATTTGGCCGAAGCGC TGGCTAATGACGAAAAAGTCAGTAAAACATTACTGCGTCAGGCGTTACGTACTTATACGATGAGTTGGCGTTATTTGGCT TGTTGTAAAGCAAATGTCCAACGTGTCGGTTTACAAGGCGAAGAAGCCGGTATTGTGGATGAAGCGCAAGCAGAGCATGC GGCACAAACTTTAACGGTTGCCAAAGAAGCTTATGCGGCTCGTAAAGCGGAACAGCGAAAAGAGCAACGCAAAGAATTCT TTAAGAAAAAAGCTCAAGAAGAGAAAGCGAAGAAAAATGCTGCAAATCAAGTGAAGAAAACTCCTCGAGTTGCGAAAGAA GCTTCTGTAAAAGCGACCGCCGAGAGTTTAGCGGCATTAACAAGCAAATTTGGTAAGGGAAATAAATAA
Upstream 100 bases:
>100_bases TTTTATATAGACGGGAATCCGTAAATAAAATATAGTAGCGGGCTAAGACTCTGTATTGGGTCGGCATCTATTTGGACTTA AATTTAAAGAGAAAAACAAT
Downstream 100 bases:
>100_bases TTTGCAGGTCTAGCGGTCGGTTTATTGTCGTTTTACAATACGTAACGTTTTTTTGACCGCTTGCATATCTTTATAATGAA TCAGGATTTTTATGAAAATA
Product: putative solute/DNA competence effector
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSEQQVKIQNGNKTNPSVKEVITYLAEKFPLCFSVEGEAKPLKVGLFQDLAEALANDEKVSKTLLRQALRTYTMSWRYLA CCKANVQRVGLQGEEAGIVDEAQAEHAAQTLTVAKEAYAARKAEQRKEQRKEFFKKKAQEEKAKKNAANQVKKTPRVAKE ASVKATAESLAALTSKFGKGNK
Sequences:
>Translated_182_residues MSEQQVKIQNGNKTNPSVKEVITYLAEKFPLCFSVEGEAKPLKVGLFQDLAEALANDEKVSKTLLRQALRTYTMSWRYLA CCKANVQRVGLQGEEAGIVDEAQAEHAAQTLTVAKEAYAARKAEQRKEQRKEFFKKKAQEEKAKKNAANQVKKTPRVAKE ASVKATAESLAALTSKFGKGNK >Mature_181_residues SEQQVKIQNGNKTNPSVKEVITYLAEKFPLCFSVEGEAKPLKVGLFQDLAEALANDEKVSKTLLRQALRTYTMSWRYLAC CKANVQRVGLQGEEAGIVDEAQAEHAAQTLTVAKEAYAARKAEQRKEQRKEFFKKKAQEEKAKKNAANQVKKTPRVAKEA SVKATAESLAALTSKFGKGNK
Specific function: Not Exactly Known; May Be A Structural Element That Influences The Osmotic Activation Of Prop At A Posttranslational Level. [C]
COG id: COG3109
COG function: function code T; Activator of osmoprotectant transporter ProP
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the proQ family [H]
Homologues:
Organism=Escherichia coli, GI48994892, Length=123, Percent_Identity=51.219512195122, Blast_Score=124, Evalue=5e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016103 [H]
Pfam domain/function: PF04352 ProQ [H]
EC number: NA
Molecular weight: Translated: 20163; Mature: 20032
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEQQVKIQNGNKTNPSVKEVITYLAEKFPLCFSVEGEAKPLKVGLFQDLAEALANDEKV CCCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHHH SKTLLRQALRTYTMSWRYLACCKANVQRVGLQGEEAGIVDEAQAEHAAQTLTVAKEAYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RKAEQRKEQRKEFFKKKAQEEKAKKNAANQVKKTPRVAKEASVKATAESLAALTSKFGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NK CC >Mature Secondary Structure SEQQVKIQNGNKTNPSVKEVITYLAEKFPLCFSVEGEAKPLKVGLFQDLAEALANDEKV CCCCEEECCCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCHHHH SKTLLRQALRTYTMSWRYLACCKANVQRVGLQGEEAGIVDEAQAEHAAQTLTVAKEAYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH RKAEQRKEQRKEFFKKKAQEEKAKKNAANQVKKTPRVAKEASVKATAESLAALTSKFGKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA