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The map label for this gene is nisX1 [H]

Identifier: 126175742

GI number: 126175742

Start: 4167516

End: 4168469

Strand: Direct

Name: nisX1 [H]

Synonym: Sbal_3545

Alternate gene names: 126175742

Gene position: 4167516-4168469 (Clockwise)

Preceding gene: 126175741

Following gene: 126175743

Centisome position: 81.28

GC content: 46.65

Gene sequence:

>954_bases
TTGCCTGAGCGCATAGCATTGATTGCCTTAATTCAAGAGGCGTATACCCAGGGTGCTCGCCTTTATAAGGCTTGTGCTGA
AACGGGCCTCAGTAAGCGTACCTATCGACGTTGGTATCGAGAAGGTCAAGTGCAAGCTGATTTAAGGCCAACAGCAGCTC
GTCCAGAGCCGGCCAATAAACTCGAAGAACATGAGCGACAACAGATATTAAGTGTGTGTAATCAAGCGGAGTACGCCAGC
TTACCCCCGTCGCAAATTGTGCCAACATTATTAGATAACGGGATTTATATCGCCTCGGAATCCAGCTTCTACAGAGTGTT
AAATGCTCATGGTCAACTTAACCATCGTGGCCGCACTCAGGCTACGGTCAATCGAAGCAAACCGTTGAGTTATCGGGCAG
ATGGGCCGAATCAAGTGTGGTCATGGGACATCACTTATTTGGCCTCAACCGTTAAAGGCCAGTTCTACTATCTGTACCTG
TTTGAAGATATTTACAGTAGAAAAATAGTGGGTTACGAAGTTCATGAGCAAGAAAATGGGGAATATGCAGCCGCACTAAT
CCAACGCAGTCTGTTACGCGAGCAATGCTTTAACACGCCATTAGTGCTGCATTCTGATAATGGGGCGCCGATGAAGTCAC
TGACCATGAAAGCCAAGCTGGAAGAGCTCGGTATTACGGCATCATTAAGTCGGCCACGAGTGAGTAACGATAATCCGTTT
TCAGAGTCGTTATTTAAAACATTAAAATACCGTCCACAGTGGCCGGCATCAGGTTTTAGCTGCTTAGCAACAGCAAGAGA
ATGGGTGGAAAAGTTTGTAAGCTGGTACAACGATGAGCATAAACACAGCCAGCTAAATTTTGTCTCACCAGGGCAACGTC
ATGCACTGCAAGATGGCGCTATTTTAGCCAAGCGCAAGAAAGTGTGTTCTGGTCTAATCCCATCGGACACTTAA

Upstream 100 bases:

>100_bases
GCTACAAGGAGAAAGCGTTGGCAGAAGCTGCCGCATTACTGGTGCTCAGAAAAAAGCTCAATGTGCTCTGGGGGGACGAC
AGCGAGGAGAGCTAACCCCT

Downstream 100 bases:

>100_bases
TTTTGAGACAGTATGGTCAATAAATTAAGAGGTCTATATGAGTCTGAAGAAATCACATAAGAGTTATCCGCAGGCATTTA
AAGATGAAGCCGTCTTGATG

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MPERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQVQADLRPTAARPEPANKLEEHERQQILSVCNQAEYAS
LPPSQIVPTLLDNGIYIASESSFYRVLNAHGQLNHRGRTQATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYL
FEDIYSRKIVGYEVHEQENGEYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKAKLEELGITASLSRPRVSNDNPF
SESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWYNDEHKHSQLNFVSPGQRHALQDGAILAKRKKVCSGLIPSDT

Sequences:

>Translated_317_residues
MPERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQVQADLRPTAARPEPANKLEEHERQQILSVCNQAEYAS
LPPSQIVPTLLDNGIYIASESSFYRVLNAHGQLNHRGRTQATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYL
FEDIYSRKIVGYEVHEQENGEYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKAKLEELGITASLSRPRVSNDNPF
SESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWYNDEHKHSQLNFVSPGQRHALQDGAILAKRKKVCSGLIPSDT
>Mature_316_residues
PERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQVQADLRPTAARPEPANKLEEHERQQILSVCNQAEYASL
PPSQIVPTLLDNGIYIASESSFYRVLNAHGQLNHRGRTQATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYLF
EDIYSRKIVGYEVHEQENGEYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKAKLEELGITASLSRPRVSNDNPFS
ESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWYNDEHKHSQLNFVSPGQRHALQDGAILAKRKKVCSGLIPSDT

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1788405, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1787263, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786753, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786570, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786490, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 36092; Mature: 35961

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQVQADLRPTAARPEPANK
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHH
LEEHERQQILSVCNQAEYASLPPSQIVPTLLDNGIYIASESSFYRVLNAHGQLNHRGRTQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCC
ATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYLFEDIYSRKIVGYEVHEQENG
EEECCCCCCEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEHHHHHCCEECEEECCCCCC
EYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKAKLEELGITASLSRPRVSNDNPF
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCH
SESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWYNDEHKHSQLNFVSPGQRHALQDGA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHCCH
ILAKRKKVCSGLIPSDT
HHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PERIALIALIQEAYTQGARLYKACAETGLSKRTYRRWYREGQVQADLRPTAARPEPANK
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEECCCCCCCCCCCHHH
LEEHERQQILSVCNQAEYASLPPSQIVPTLLDNGIYIASESSFYRVLNAHGQLNHRGRTQ
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHCCCCCCCCCCC
ATVNRSKPLSYRADGPNQVWSWDITYLASTVKGQFYYLYLFEDIYSRKIVGYEVHEQENG
EEECCCCCCEECCCCCCCEEEHHHHHHHHHHCCCEEEEEEEHHHHHCCEECEEECCCCCC
EYAAALIQRSLLREQCFNTPLVLHSDNGAPMKSLTMKAKLEELGITASLSRPRVSNDNPF
HHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCEEECCCCCCCCCCCH
SESLFKTLKYRPQWPASGFSCLATAREWVEKFVSWYNDEHKHSQLNFVSPGQRHALQDGA
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHHHCCH
ILAKRKKVCSGLIPSDT
HHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1482189; 11337471; 1482192 [H]