| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175741
Identifier: 126175741
GI number: 126175741
Start: 4167010
End: 4167510
Strand: Direct
Name: 126175741
Synonym: Sbal_3544
Alternate gene names: NA
Gene position: 4167010-4167510 (Clockwise)
Preceding gene: 126175740
Following gene: 126175742
Centisome position: 81.27
GC content: 47.11
Gene sequence:
>501_bases ATGGCTCGGTATTCACCAGAACGTAAAGAGGCGATCCTTAAAAAATTATTACCTCCTCACAACTTAACGGTCGCAGAGGT AGCTCGGGAAGAAGGCATAGCGGTGCAAACCTTGTATCATTGGCGAGATATAGCCAGAAAAGAAGGTCGCCCCGTGCCAG GAAAAACATTAACAGCCGATGATTGGTCTGCAGAAGCTAAGTTTGCGGTACTCATTGAAACTGCTCCGCTATCAGAAGCA GAAATAAGCCAGTATTGCCGTGAAAAAGGTTTGTACCGCGAACAAGTACAACAGTGGAAGTTGGAGTGCTTGTCTGGTTT TCAAACCTCAGAAGTACAAACTAAAACCATTAAACAGCAGGCCAAGGCTGACAAAGCCGAAATCAAATCGCTGCAACGGG AATTACGCTACAAGGAGAAAGCGTTGGCAGAAGCTGCCGCATTACTGGTGCTCAGAAAAAAGCTCAATGTGCTCTGGGGG GACGACAGCGAGGAGAGCTAA
Upstream 100 bases:
>100_bases GGGCAGAATGTGGTTAACATGAATGCCCCCTGTGTCAGGATTGTTGTCACCCCTAAATAATCATTATTTTTAAAGACAGG GTGCGGCAAAAGAGAATGAT
Downstream 100 bases:
>100_bases CCCCTTTGCCTGAGCGCATAGCATTGATTGCCTTAATTCAAGAGGCGTATACCCAGGGTGCTCGCCTTTATAAGGCTTGT GCTGAAACGGGCCTCAGTAA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDIARKEGRPVPGKTLTADDWSAEAKFAVLIETAPLSEA EISQYCREKGLYREQVQQWKLECLSGFQTSEVQTKTIKQQAKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWG DDSEES
Sequences:
>Translated_166_residues MARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDIARKEGRPVPGKTLTADDWSAEAKFAVLIETAPLSEA EISQYCREKGLYREQVQQWKLECLSGFQTSEVQTKTIKQQAKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWG DDSEES >Mature_165_residues ARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDIARKEGRPVPGKTLTADDWSAEAKFAVLIETAPLSEAE ISQYCREKGLYREQVQQWKLECLSGFQTSEVQTKTIKQQAKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWGD DSEES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18938; Mature: 18807
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDIARKEGRPVPGKTLTAD CCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DWSAEAKFAVLIETAPLSEAEISQYCREKGLYREQVQQWKLECLSGFQTSEVQTKTIKQQ CCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWGDDSEES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARYSPERKEAILKKLLPPHNLTVAEVAREEGIAVQTLYHWRDIARKEGRPVPGKTLTAD CCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC DWSAEAKFAVLIETAPLSEAEISQYCREKGLYREQVQQWKLECLSGFQTSEVQTKTIKQQ CCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AKADKAEIKSLQRELRYKEKALAEAAALLVLRKKLNVLWGDDSEES HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA