| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175743
Identifier: 126175743
GI number: 126175743
Start: 4168507
End: 4168704
Strand: Direct
Name: 126175743
Synonym: Sbal_3546
Alternate gene names: NA
Gene position: 4168507-4168704 (Clockwise)
Preceding gene: 126175742
Following gene: 126175744
Centisome position: 81.3
GC content: 44.95
Gene sequence:
>198_bases ATGAGTCTGAAGAAATCACATAAGAGTTATCCGCAGGCATTTAAAGATGAAGCCGTCTTGATGGTGCTAGAACAAGGTTA TAGCGTTGCCGATGCGGCAAAGTCTCTTGGAGTTAGCACGAGCCTGCTTTACAACTGGAAGGAAAAACACGAAGCCCTGA AACAAGGTATCACCTTTATTGCGCGACAATTACCCTGA
Upstream 100 bases:
>100_bases GATGGCGCTATTTTAGCCAAGCGCAAGAAAGTGTGTTCTGGTCTAATCCCATCGGACACTTAATTTTGAGACAGTATGGT CAATAAATTAAGAGGTCTAT
Downstream 100 bases:
>100_bases CCGGTTCAGCGACAATTAGAATGGCCGGTTGATCTGATACATTCTGGACAAAGATTCTAAGGGAGTTCTTTGTGCCAGGT CATCGAATTACAGATCAACA
Product: transposase IS3/IS911 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALKQGITFIARQLP
Sequences:
>Translated_65_residues MSLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALKQGITFIARQLP >Mature_64_residues SLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALKQGITFIARQLP
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7283; Mature: 7151
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALKQGITFI CCCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ARQLP HHCCC >Mature Secondary Structure SLKKSHKSYPQAFKDEAVLMVLEQGYSVADAAKSLGVSTSLLYNWKEKHEALKQGITFI CCCCHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ARQLP HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA