| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175599
Identifier: 126175599
GI number: 126175599
Start: 3982986
End: 3983825
Strand: Direct
Name: 126175599
Synonym: Sbal_3402
Alternate gene names: NA
Gene position: 3982986-3983825 (Clockwise)
Preceding gene: 126175598
Following gene: 126175600
Centisome position: 77.68
GC content: 49.17
Gene sequence:
>840_bases ATGAAGGATTCAGATATTTTAATGTTGGCAGAAGAAGGTGAGTCAACATCCGAGGCATCTGCTCGCAAAAAAGCCCTGCT ACTCGGCCGTCAATTAGGCTTAGCCAGTGAGCAAGAATATCGCCCTGCGAATGCTTCCATCGCCGAACGCGCCCAACATA GAGCCCGCAAGTTATCGAGCCAGTATCAAGCCAATGTGGAAACCATTTTTGCCTTAGCCCTCAGTTATACGCCATCTGAT GTGACTGGAGTCGATCTCGATCCCGATTGGAGTCATCAATTCTTTTTGATGGCGGAGCAAATCCATAACCGCAGAATGCA AGACTTGTGGGCACGGATATTATCGAGCGAGATAGTTAATCCCGGCAACTTCAGTCTGCGCACCTTAGCGCTACTCAAGC AACTGACGCACAGGGAAGCACAAATCCTTGAAAAAGCCCTCGGAATGGCGGCTAAGGTCAATAGCGAACAGCGCCTAAAA CTCATCAGCGGCTATCGCTTATCCGGTGGTATTGGCCAGTATTTCCGTAAAACGACCTCAGTCAATTTAGGCTTATCCCA GTTTGGCCTACCCTACTCCAGCATTCTGACCTTAGTCGATGCGGGGATACTGCACAGCAGCGAGTTCGAAACCGGCTTGC TCAACAACAAAACGCCGATTCAATTTGCCCTGCAAGGCATACAAATGAAGCTCACGCCTAAGAGCGGCAATCTGCTTTTT AGCTATTATCGCTTCACGCCGATTGGTGATGAACTGGCCCAACTCGTGCAACCTAAGCCGGATCAAGAATACCTCAAGGC CCTGCAACTCTTGTTCGCTAAGGATTTTAAGATCGAGTAG
Upstream 100 bases:
>100_bases TACTCAAGTTAAATGCTAAAGCTAGGCAAACAAGTTAAACAGATAAAGGTGAGCGCTTTGCTCTCACCTCCCCACCAATG CAGGCTCAAGGATTAACGCG
Downstream 100 bases:
>100_bases CGACATAATCGCTTATATTATTGACTAATAAAAATATTTGCTTGAATAAACTCCATCTGTCGCAAATACTCTATGTATAA AAAATGCTCGTTTTATTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MKDSDILMLAEEGESTSEASARKKALLLGRQLGLASEQEYRPANASIAERAQHRARKLSSQYQANVETIFALALSYTPSD VTGVDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIVNPGNFSLRTLALLKQLTHREAQILEKALGMAAKVNSEQRLK LISGYRLSGGIGQYFRKTTSVNLGLSQFGLPYSSILTLVDAGILHSSEFETGLLNNKTPIQFALQGIQMKLTPKSGNLLF SYYRFTPIGDELAQLVQPKPDQEYLKALQLLFAKDFKIE
Sequences:
>Translated_279_residues MKDSDILMLAEEGESTSEASARKKALLLGRQLGLASEQEYRPANASIAERAQHRARKLSSQYQANVETIFALALSYTPSD VTGVDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIVNPGNFSLRTLALLKQLTHREAQILEKALGMAAKVNSEQRLK LISGYRLSGGIGQYFRKTTSVNLGLSQFGLPYSSILTLVDAGILHSSEFETGLLNNKTPIQFALQGIQMKLTPKSGNLLF SYYRFTPIGDELAQLVQPKPDQEYLKALQLLFAKDFKIE >Mature_279_residues MKDSDILMLAEEGESTSEASARKKALLLGRQLGLASEQEYRPANASIAERAQHRARKLSSQYQANVETIFALALSYTPSD VTGVDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIVNPGNFSLRTLALLKQLTHREAQILEKALGMAAKVNSEQRLK LISGYRLSGGIGQYFRKTTSVNLGLSQFGLPYSSILTLVDAGILHSSEFETGLLNNKTPIQFALQGIQMKLTPKSGNLLF SYYRFTPIGDELAQLVQPKPDQEYLKALQLLFAKDFKIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31238; Mature: 31238
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDSDILMLAEEGESTSEASARKKALLLGRQLGLASEQEYRPANASIAERAQHRARKLSS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QYQANVETIFALALSYTPSDVTGVDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIVN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNFSLRTLALLKQLTHREAQILEKALGMAAKVNSEQRLKLISGYRLSGGIGQYFRKTTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEECCCCHHHHHHHHCC VNLGLSQFGLPYSSILTLVDAGILHSSEFETGLLNNKTPIQFALQGIQMKLTPKSGNLLF CCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEECCEEEEECCCCCEEE SYYRFTPIGDELAQLVQPKPDQEYLKALQLLFAKDFKIE EEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKDSDILMLAEEGESTSEASARKKALLLGRQLGLASEQEYRPANASIAERAQHRARKLSS CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH QYQANVETIFALALSYTPSDVTGVDLDPDWSHQFFLMAEQIHNRRMQDLWARILSSEIVN HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGNFSLRTLALLKQLTHREAQILEKALGMAAKVNSEQRLKLISGYRLSGGIGQYFRKTTS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCEECCCCHHHHHHHHCC VNLGLSQFGLPYSSILTLVDAGILHSSEFETGLLNNKTPIQFALQGIQMKLTPKSGNLLF CCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEECCEEEEECCCCCEEE SYYRFTPIGDELAQLVQPKPDQEYLKALQLLFAKDFKIE EEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA