| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126175598
Identifier: 126175598
GI number: 126175598
Start: 3981481
End: 3982773
Strand: Direct
Name: 126175598
Synonym: Sbal_3401
Alternate gene names: NA
Gene position: 3981481-3982773 (Clockwise)
Preceding gene: 126175595
Following gene: 126175599
Centisome position: 77.65
GC content: 45.94
Gene sequence:
>1293_bases TTGAAAGGGATAAGTCACACCTTATATAGCCAACCCGAAGAAAAAGCATTAGCATTTGCACACTTACCGCCTGAGTCCAT ATCCATGAAATCCATTCAAACCAAAGATCCTAAAGCACTCTTGCTGTGGATGACCTTTGTGATGTCGCTCGTGTTTGCAG TATGGCAGGCACTGCTCAATAACTTCGTGATTGAAAAAGCCCAGTTCACCGGTGCTGAAATTGGCATGTTACAAAGCCTG CGCGAGATCCCGGGCTTCTTGGCATTCACCGCCATTTTTGTGCTTTTACTCATTCGAGAACAAGCCTTCGCCCTGCTCTC GCTGGCCTTGTTATGCATTGGCGTGGCAGTGACAGGTTTCTTTCCTCAAGTCATCGGCTTGTATCTGACGACGGTATTGA TGTCTGTCGGGTTTCACTATTTTGAAACCATCAACCAATCACTGACGCTGCAGTGGGTCGATAAAAAAGATGCGGCGGGT TTTATGGGTAAAGCACTGGCGTGGCGCTCTGCCGCAGCCTTAGTGGGCTATGCCAGTATTTGGTTAGTGATGACCTGGTT GAAGTTAGACTATCAACACATGTATTTGATTATTGGTGCGTTAGGTCTGGTCATGGTGCTGACCATGACTTGGTATTACC CTAAATTTGAGACCACGGAAGTACAACATAAGAAAATCATTCTGCGTAAGCGCTATTGGCTCTATTACCTGCTGACCTTT TTCTCGGGTGCGAGACGGCAAATTTTTATGGTGTTTGCGGGCTTTATGATGGTCGAAAAGTTTGGTTATAGCGTGAGTGA AATTACTGCGCTGTTCTTAATAAACTATGTCGTTAATCTGTTGTTTGCGCCTGCGATTGGGCGGTTTATTGGCCGAATTG GTGAGCGTAATGCGCTGACAGTGGAATACGTTGGACTCATCATAGTCTTCATCAGTTACGCCTTAGTCGAACAAGCACAC ATGGCGGCAGCGCTGTATGTGATCGACCATTTACTGTTTGCTATGGCTATCGCGATGAAAACCTATTTTCAAAAAATCGC CGACAGCAAAGATATTGCCGCCACTATGTCCGTCAGTTTCACCATTAATCACATTGCCGCTGTGATTATTCCTGTGATTT TGGGCTTATTATGGTTAACCGATCCCGCCTTGGTATTTTACATAGGCGCAGGCTTTGCCGTATGTTCGTTAATTCTGGCG CTCAATGTACCGCGCCATCCTGAACCGGGTAATGAAACCTTATGGTCTTGGACGAGCAAAAAAGCGAAATCCATCGCTAA AGCGGTCGAATAA
Upstream 100 bases:
>100_bases GGTAGTTTTAACTGTCTCACAAAAATAGCACCTCAGGACTGTTTCCGTGTTCGCAGCTTTACTCACGACCGAGTTAATCT GACTAAAGATTGTTACAAAA
Downstream 100 bases:
>100_bases AGCGGCATAATAACGGGCCAAGGAATAAGCTAAGCTCAATGCTGAGTCTAGAACTGAACGCTAAAACGATCGCCATCTAA GCTAGGCACTCAAGCGAGCT
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 430; Mature: 430
Protein sequence:
>430_residues MKGISHTLYSQPEEKALAFAHLPPESISMKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSL REIPGFLAFTAIFVLLLIREQAFALLSLALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAG FMGKALAWRSAAALVGYASIWLVMTWLKLDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTF FSGARRQIFMVFAGFMMVEKFGYSVSEITALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAH MAAALYVIDHLLFAMAIAMKTYFQKIADSKDIAATMSVSFTINHIAAVIIPVILGLLWLTDPALVFYIGAGFAVCSLILA LNVPRHPEPGNETLWSWTSKKAKSIAKAVE
Sequences:
>Translated_430_residues MKGISHTLYSQPEEKALAFAHLPPESISMKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSL REIPGFLAFTAIFVLLLIREQAFALLSLALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAG FMGKALAWRSAAALVGYASIWLVMTWLKLDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTF FSGARRQIFMVFAGFMMVEKFGYSVSEITALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAH MAAALYVIDHLLFAMAIAMKTYFQKIADSKDIAATMSVSFTINHIAAVIIPVILGLLWLTDPALVFYIGAGFAVCSLILA LNVPRHPEPGNETLWSWTSKKAKSIAKAVE >Mature_430_residues MKGISHTLYSQPEEKALAFAHLPPESISMKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSL REIPGFLAFTAIFVLLLIREQAFALLSLALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAG FMGKALAWRSAAALVGYASIWLVMTWLKLDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTF FSGARRQIFMVFAGFMMVEKFGYSVSEITALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAH MAAALYVIDHLLFAMAIAMKTYFQKIADSKDIAATMSVSFTINHIAAVIIPVILGLLWLTDPALVFYIGAGFAVCSLILA LNVPRHPEPGNETLWSWTSKKAKSIAKAVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48277; Mature: 48277
Theoretical pI: Translated: 9.46; Mature: 9.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGISHTLYSQPEEKALAFAHLPPESISMKSIQTKDPKALLLWMTFVMSLVFAVWQALLN CCCCCCHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NFVIEKAQFTGAEIGMLQSLREIPGFLAFTAIFVLLLIREQAFALLSLALLCIGVAVTGF HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAGFMGKALAWRSAAALVGYASI HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH WLVMTWLKLDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FSGARRQIFMVFAGFMMVEKFGYSVSEITALFLINYVVNLLFAPAIGRFIGRIGERNALT HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VEYVGLIIVFISYALVEQAHMAAALYVIDHLLFAMAIAMKTYFQKIADSKDIAATMSVSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TINHIAAVIIPVILGLLWLTDPALVFYIGAGFAVCSLILALNVPRHPEPGNETLWSWTSK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH KAKSIAKAVE HHHHHHHHCC >Mature Secondary Structure MKGISHTLYSQPEEKALAFAHLPPESISMKSIQTKDPKALLLWMTFVMSLVFAVWQALLN CCCCCCHHHCCCHHHHEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH NFVIEKAQFTGAEIGMLQSLREIPGFLAFTAIFVLLLIREQAFALLSLALLCIGVAVTGF HHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAGFMGKALAWRSAAALVGYASI HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH WLVMTWLKLDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH FSGARRQIFMVFAGFMMVEKFGYSVSEITALFLINYVVNLLFAPAIGRFIGRIGERNALT HHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH VEYVGLIIVFISYALVEQAHMAAALYVIDHLLFAMAIAMKTYFQKIADSKDIAATMSVSF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH TINHIAAVIIPVILGLLWLTDPALVFYIGAGFAVCSLILALNVPRHPEPGNETLWSWTSK HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH KAKSIAKAVE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA