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The map label for this gene is rpfG [H]

Identifier: 126174415

GI number: 126174415

Start: 2544777

End: 2546348

Strand: Direct

Name: rpfG [H]

Synonym: Sbal_2199

Alternate gene names: 126174415

Gene position: 2544777-2546348 (Clockwise)

Preceding gene: 126174412

Following gene: 126174417

Centisome position: 49.63

GC content: 44.4

Gene sequence:

>1572_bases
ATGCTGATTGATCTTGCAAAGAAAAACCCGCTGTTTTCCGGTAAAAAGCATACCGAGACAACTGAGTCTGGTATTCCTTG
GAAGGTATTAGTGGTCGATGATGAACCTGATGTTCATACCGTCACTAAACTTGCCCTATCCCGCTTTAAACTCGATGGCC
GCGCCCTCACCTTTATCAATGCCTACAGTGCTGAACAAGCAAAAGAGTTACTCAATCAAGAACGTGATATCGCCATCGCC
TTTATTGATGTTGTGATGGAGAGTGATCATGCAGGCTTAGAGTTAGTGAAATGGATCCGTGAAGAACTCCAAAATAAAAC
CACACGATTAATCCTGCGCACGGGCCAACCTGGTCAAGCACCTGAAGAAGACGTTATCGTCAATTACGATATTAATGATT
ACAAAGCCAAAGCTGAACTCGATTCCCGTAAACTCATGACTAGCGTCTACTCTGCCCTGCGCTCCTATCGCGATATTATG
GAAATTGAGCAAGCAAGGCGTACCCAAATCAACCACCGTAAAGGGTTAGAAAGAGTACTAGAAGCAACATCTGGATTATT
TGAGCTGCGCACCCTGCATAAATTTGCCGATGGACTGCTTACTCAAGTCGCCACCCTGCTTAATCTGGATTCAGAAACCC
TACTGCTAACGTGCAATGCTATTGATGCGATCAGCGGCCATCTTGATCCCGTGAATATTGAGATCCTCGCGGGCACAGGC
CAGTTTTCCAATAAAAACCATATTACTCAATTGCCAGAGCATATCGACCGCTTACTGCGTAATGCGCTCACGCAAAAACG
CTGCCTTTATGAAGACAACTGCTTTGTCGGTTACTTCCCCACAAAAAGCGGGTTAATCAATCTATTGTATATGGATGGTA
TTGATAAAATTGATGATCTTGATAAGAAACTCATTGATATTTTTGCCATCAACGTCGGCGTTGCATTTGAAAACTTGCTG
CTCAGTCAAGAAGTTGAAGATACTCAATCTGAGCTCATTCTGCGTTTAGGGGATGTGGTTGAAAGCCGCTCAAAAGAAGC
CGCCAATCACGTGAAACGTATGGCGGAATATTGCTCCCAACTCGCTTTACTCGCTGGTTTACCTGAATACGAAGCCGATT
TACTGCGCCGCGCCTCACCTATGCATGACATAGGTAAAATAGCGATCCCCGATGCGGTTCTGCTCAAACCCGGTAAGTTA
GACGATGAAGAATGGCAAGTCATGCGTCAGCACCCTACGATTGGTCATCAGATTTTGGCGAATTCAGAGCGCCCTATCCT
CAAAGCTGCATCGGTTATTGCACTGCAACACCATGAAAAATATGATGGTTCTGGTTATCCCGCCAATTTAAAACAAGACG
AAATTCACATTTTCGCGCGAATTGTGGCTATTGCAGATGTGTTTGATGCACTTTCTCATGCCCGCTGCTATAAAACGGCT
TGGCCTTTAGAGGAAGTGTTAGCTGAAATGCGTAAAGGTGCCGCAAAACACTTTGACCCACACTTATTGCAGCTTTTTAT
CGATAATGTGGATATTTTTGTCAAAGTAAAAGACAACTGGAAGGACAATTAA

Upstream 100 bases:

>100_bases
GCCACTCACCTCGCTATTTAATGTAAGATTTTGCACTTGTTTGAAATGTGTCTACTACACTGATTATGTGATCATTATTT
TTATTTGAATGAGGTATCGG

Downstream 100 bases:

>100_bases
GCTGCGATAACCAGAGGTAATTGTCCGAAAGTTTTGAAGGCTATTTGAGTCAGTATTAGGCCTGTCTTAGCCATTGTCAT
CAGCGAGAAAATCAAACACT

Product: response regulator receiver modulated metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MLIDLAKKNPLFSGKKHTETTESGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRALTFINAYSAEQAKELLNQERDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKNHITQLPEHIDRLLRNALTQKRCLYEDNCFVGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LSQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWQVMRQHPTIGHQILANSERPILKAASVIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDNWKDN

Sequences:

>Translated_523_residues
MLIDLAKKNPLFSGKKHTETTESGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRALTFINAYSAEQAKELLNQERDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKNHITQLPEHIDRLLRNALTQKRCLYEDNCFVGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LSQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWQVMRQHPTIGHQILANSERPILKAASVIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDNWKDN
>Mature_523_residues
MLIDLAKKNPLFSGKKHTETTESGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRALTFINAYSAEQAKELLNQERDIAIA
FIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQAPEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIM
EIEQARRTQINHRKGLERVLEATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
QFSNKNHITQLPEHIDRLLRNALTQKRCLYEDNCFVGYFPTKSGLINLLYMDGIDKIDDLDKKLIDIFAINVGVAFENLL
LSQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQLALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKL
DDEEWQVMRQHPTIGHQILANSERPILKAASVIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDNWKDN

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG3437

COG function: function code KT; Response regulator containing a CheY-like receiver domain and an HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 59123; Mature: 59123

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLAKKNPLFSGKKHTETTESGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRALTFIN
CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEE
AYSAEQAKELLNQERDIAIAFIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQA
HHCHHHHHHHHCCCCCHHEEEEEHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
PEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIMEIEQARRTQINHRKGLERVL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEEECCC
QFSNKNHITQLPEHIDRLLRNALTQKRCLYEDNCFVGYFPTKSGLINLLYMDGIDKIDDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHH
DKKLIDIFAINVGVAFENLLLSQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKLDDEEWQVMRQHPTIGHQILA
HHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHC
NSERPILKAASVIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDNWKDN
CCHHHHHHHHHHCHHHCCCHHHHHHHHCCCEEEEEEECCCCCC
>Mature Secondary Structure
MLIDLAKKNPLFSGKKHTETTESGIPWKVLVVDDEPDVHTVTKLALSRFKLDGRALTFIN
CEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEE
AYSAEQAKELLNQERDIAIAFIDVVMESDHAGLELVKWIREELQNKTTRLILRTGQPGQA
HHCHHHHHHHHCCCCCHHEEEEEHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC
PEEDVIVNYDINDYKAKAELDSRKLMTSVYSALRSYRDIMEIEQARRTQINHRKGLERVL
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EATSGLFELRTLHKFADGLLTQVATLLNLDSETLLLTCNAIDAISGHLDPVNIEILAGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHCCCCCCEEEEEEECCC
QFSNKNHITQLPEHIDRLLRNALTQKRCLYEDNCFVGYFPTKSGLINLLYMDGIDKIDDL
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEEEEECCCCHHHHH
DKKLIDIFAINVGVAFENLLLSQEVEDTQSELILRLGDVVESRSKEAANHVKRMAEYCSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALLAGLPEYEADLLRRASPMHDIGKIAIPDAVLLKPGKLDDEEWQVMRQHPTIGHQILA
HHHHHCCCHHHHHHHHHCCCCHHCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCHHHHC
NSERPILKAASVIALQHHEKYDGSGYPANLKQDEIHIFARIVAIADVFDALSHARCYKTA
CCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
WPLEEVLAEMRKGAAKHFDPHLLQLFIDNVDIFVKVKDNWKDN
CCHHHHHHHHHHCHHHCCCHHHHHHHHCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]