Click here to switch to the map view.

The map label for this gene is fixN [H]

Identifier: 126174417

GI number: 126174417

Start: 2547126

End: 2548562

Strand: Direct

Name: fixN [H]

Synonym: Sbal_2201

Alternate gene names: 126174417

Gene position: 2547126-2548562 (Clockwise)

Preceding gene: 126174415

Following gene: 126174418

Centisome position: 49.68

GC content: 45.93

Gene sequence:

>1437_bases
ATGATGAACCATTCCCAGCCAACAGGCGCTGATTACAATTACGCCATTGTCCGCCAATTTGCCTTAACCACAGTTTTGTG
GGGTATTGTTGGTATGTCAGTCGGCGTATTAATTGCGGCTCAGTTAATCTGGCCTCAGCTGAACTTTGACACTCCTTGGT
TAACGTATAGTCGCTTGCGACCATTACACACCAATGCGGTGATCTTCGCGTTCGGTACATCAGCCCTTTTTGCAACATCC
TATTATGTCGTACAACGCACCTGTCAAACCCGACTATTTGCACCTAAGTTAGCCGCATTTACGTTTTGGGGATGGCAAGC
CATCATTCTGTCAGCAGCTATCACTTTGCCAATGGGTTTCACCCAAGGTAAAGAATACGCTGAATTAGAATGGCCTATCG
ATATCGCAATTACTATCGTTTGGGTGTCCTACGCTATTGTGTTCTTCGGTACTATTATCAAACGAACGACTTCGCATATT
TACGTGGCGAACTGGTTCTTTGGTGCCTTTATTATTACCGTTGCCGTACTACACATAGTTAACTCTATGGCAGTACCAGT
CAGTCTGTTCAAGTCATACTCTCTGTATAGCGGCGCTGTCGATGCTATGGTGCAGTGGTGGTATGGTCACAACGCTGTAG
GTTTCTTATTAACCGCAGGCTTCTTGGGGATGATGTATTACTTCGTACCTAAGCAAGCGGGTCGTCCGGTGTACTCTTAC
CGTCTATCTATTGTCCATTTTTGGGCTTTGATCGCACTGTATATTTGGGCTGGTCCTCACCACTTACATTACACAGCTTT
ACCTGACTGGACTCAGTCTTTAGGTATGGTGATGTCACTGATCCTATTCGCACCTTCTTGGGGCGGTATGATTAACGGTA
TCATGACCTTGTCTGGTGCTTGGCATAAACTGCGTACTGACCCTGTACTGCGTTTCTTAGTCGTTTCTCTGTCTTTCTAC
GGTATGTCTACCTTCGAAGGCCCGATGATGGCAATTAAGACAGTTAACGCACTATCACATTATACAGACTGGACTATCGG
TCACGTTCACTCCGGCGCGCTAGGCTGGGTTGCAATGGTGTCTATCGGTTCTCTGTATCATTTGATCCCTGTATTGTTCG
GCCACGGCCGTATGTACAGCATCAAGTTAGTCAACGTCCATTTCTGGTTAGCGACTATTGGTACTGTGCTTTACATCGTC
TCTATGTGGATTTCAGGTGTAATGCAAGGTCTAATGTGGCGCGCAGTGAATGCTGACGGTACTTTGACTTATAGCTTTGT
TGAAAGTCTTGAAGCTTCATATCCTTTCTACTTTGTACGTTTCCTTGGCGGTTGTTTCTTCCTGACCGGTATGCTGATCA
TGGCATACAACGTGATCCGTACTGTGAAAGCCTCTAAAGATTCATTGCCAGCATTGGCTGAACCAACAGCGGCTTAA

Upstream 100 bases:

>100_bases
TGACTCAGCAACCTGAATAGGGAAGCTGAGTTTTATGTCATTTTATAACAGGTAAAGCTTGTCTTTACTAAAAGTAAAAG
TAATAAGCAGTGGAAGCATT

Downstream 100 bases:

>100_bases
AGGAGCAAACTCGATGAAATTTAATCATGAGATAGTTGAAAAAAACATCGGTTTGTTAGCGATCTTTACCGTTATCGCTA
TCAGTTTCGGTAGTCTGGTT

Product: cbb3-type cytochrome c oxidase subunit I

Products: NA

Alternate protein names: Cytochrome CBB3 subunit 1; Cytochrome c oxidase polypeptide I homolog; Heme B/copper cytochrome c oxidase subunit [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MMNHSQPTGADYNYAIVRQFALTTVLWGIVGMSVGVLIAAQLIWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGFTQGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSLYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEPTAA

Sequences:

>Translated_478_residues
MMNHSQPTGADYNYAIVRQFALTTVLWGIVGMSVGVLIAAQLIWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGFTQGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSLYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEPTAA
>Mature_478_residues
MMNHSQPTGADYNYAIVRQFALTTVLWGIVGMSVGVLIAAQLIWPQLNFDTPWLTYSRLRPLHTNAVIFAFGTSALFATS
YYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGFTQGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHI
YVANWFFGAFIITVAVLHIVNSMAVPVSLFKSYSLYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAWHKLRTDPVLRFLVVSLSFY
GMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMVSIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIV
SMWISGVMQGLMWRAVNADGTLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEPTAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 53514; Mature: 53514

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNHSQPTGADYNYAIVRQFALTTVLWGIVGMSVGVLIAAQLIWPQLNFDTPWLTYSRLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
PLHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGF
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TQGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
NSMAVPVSLFKSYSLYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGA
HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WHKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
SIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADG
HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
TLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEPTAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMNHSQPTGADYNYAIVRQFALTTVLWGIVGMSVGVLIAAQLIWPQLNFDTPWLTYSRLR
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCC
PLHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGF
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TQGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIV
CCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHH
NSMAVPVSLFKSYSLYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
RLSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGA
HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
WHKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHSGALGWVAMV
HHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCHHHHHHHH
SIGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADG
HHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
TLTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTVKASKDSLPALAEPTAA
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8386371; 12597275 [H]