| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126174344
Identifier: 126174344
GI number: 126174344
Start: 2468072
End: 2469052
Strand: Direct
Name: 126174344
Synonym: Sbal_2126
Alternate gene names: NA
Gene position: 2468072-2469052 (Clockwise)
Preceding gene: 126174343
Following gene: 126174345
Centisome position: 48.14
GC content: 40.57
Gene sequence:
>981_bases ATGGAACGCGATATGATTTGTACACCTATCTCCTATCAAAACAAAACAAGTGCACAGACATTCTCCAATTTCTTAAAACA CACCCGCACAGAGAATAACCTTTCCCAAGAAGATTTATGTGGTTTGCTCAGGCAAAAAAGTTGTCTGTTCGATACCTTAG ATTCCATCACGATTAGCCGTTGGGAGCGAGGGGTTAACATCCCATCCCTTGCTAAACAGTCTGAAATTGTTGAAATATTT GGCTCTGAACTCTTTGATATTTATCGGGAGGATAAAAAGTTTATCAACGAAGGCTTAGCCCTGATTAACCTTTTTGAGTC CAACATAGAACGCAGTGACCATCCGTACTACCGCAATACGCCTTATCGTGTCGAATTTATCGAGAGCCACCATCATAACT TCATGGCGTTACTGCAACTCAGTTTGGTTTATGAAAGTAATCCGCGTTTATCCTTTGTGAGCCGTAACTTATCTCAACCG TTTTTCCATGGTCTGTCATTAGTTGTTGCGTTTAGCTCGGGCGATCAGATAGTCGGACATAGTCTGTTTTGTCGCTCTCA GGGCAAAATCGCCCTCGAATTTATGAATGATGAGGTGGACTTATTCGAGGTGATTAACCATAACAGCCAAGCCTTACCAG ATACCTTGATGGTGTTCTCATCTTTTGGTGTGACTCCCTATATTGAAAACTACATGATGTCTGTTTATCTCAATGAATTG GCTGCGAGTCGCTCACTCAAGTTTTTAAGTTTTAATATCTGTGATGAGTCATTAAAACGAAAGTTAACGCAATTTAAGTT ACCCATTTTCAAAGTGAGAACGATAGAAGGTTGCTGCAAACCGATAAAAAACTATTCGTTTTTTTCCAGTCGCACAGAGG TGATGGCAAATCGTAATCTACTCAAGCTTTCCGTCATTCCTTCATCAAAATCCCAAACGATCGATCCCATTTTCTTCATG CAGTTAGAGACCCCTATATGA
Upstream 100 bases:
>100_bases AAGCGCATTTGGATTACTTATACATATAGACATCCAGAGCCAATAGATGACATCGACCATACGACATATATGGAGCTGCT AGATAAAGTAAAAAATACAG
Downstream 100 bases:
>100_bases ATATTCTCATCATAGATGATCAGCGCTTTATTCGAGAAACCATGAAAGCCGATATCCATAAGTTCTTGGTTGACGATAAT GTGCAGATCTATGAGGCCTG
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MERDMICTPISYQNKTSAQTFSNFLKHTRTENNLSQEDLCGLLRQKSCLFDTLDSITISRWERGVNIPSLAKQSEIVEIF GSELFDIYREDKKFINEGLALINLFESNIERSDHPYYRNTPYRVEFIESHHHNFMALLQLSLVYESNPRLSFVSRNLSQP FFHGLSLVVAFSSGDQIVGHSLFCRSQGKIALEFMNDEVDLFEVINHNSQALPDTLMVFSSFGVTPYIENYMMSVYLNEL AASRSLKFLSFNICDESLKRKLTQFKLPIFKVRTIEGCCKPIKNYSFFSSRTEVMANRNLLKLSVIPSSKSQTIDPIFFM QLETPI
Sequences:
>Translated_326_residues MERDMICTPISYQNKTSAQTFSNFLKHTRTENNLSQEDLCGLLRQKSCLFDTLDSITISRWERGVNIPSLAKQSEIVEIF GSELFDIYREDKKFINEGLALINLFESNIERSDHPYYRNTPYRVEFIESHHHNFMALLQLSLVYESNPRLSFVSRNLSQP FFHGLSLVVAFSSGDQIVGHSLFCRSQGKIALEFMNDEVDLFEVINHNSQALPDTLMVFSSFGVTPYIENYMMSVYLNEL AASRSLKFLSFNICDESLKRKLTQFKLPIFKVRTIEGCCKPIKNYSFFSSRTEVMANRNLLKLSVIPSSKSQTIDPIFFM QLETPI >Mature_326_residues MERDMICTPISYQNKTSAQTFSNFLKHTRTENNLSQEDLCGLLRQKSCLFDTLDSITISRWERGVNIPSLAKQSEIVEIF GSELFDIYREDKKFINEGLALINLFESNIERSDHPYYRNTPYRVEFIESHHHNFMALLQLSLVYESNPRLSFVSRNLSQP FFHGLSLVVAFSSGDQIVGHSLFCRSQGKIALEFMNDEVDLFEVINHNSQALPDTLMVFSSFGVTPYIENYMMSVYLNEL AASRSLKFLSFNICDESLKRKLTQFKLPIFKVRTIEGCCKPIKNYSFFSSRTEVMANRNLLKLSVIPSSKSQTIDPIFFM QLETPI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37642; Mature: 37642
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERDMICTPISYQNKTSAQTFSNFLKHTRTENNLSQEDLCGLLRQKSCLFDTLDSITISR CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WERGVNIPSLAKQSEIVEIFGSELFDIYREDKKFINEGLALINLFESNIERSDHPYYRNT HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PYRVEFIESHHHNFMALLQLSLVYESNPRLSFVSRNLSQPFFHGLSLVVAFSSGDQIVGH CEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCEEEEEEECCCCCCCCC SLFCRSQGKIALEFMNDEVDLFEVINHNSQALPDTLMVFSSFGVTPYIENYMMSVYLNEL CEEECCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AASRSLKFLSFNICDESLKRKLTQFKLPIFKVRTIEGCCKPIKNYSFFSSRTEVMANRNL HHHCCEEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCE LKLSVIPSSKSQTIDPIFFMQLETPI EEEEEECCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MERDMICTPISYQNKTSAQTFSNFLKHTRTENNLSQEDLCGLLRQKSCLFDTLDSITISR CCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH WERGVNIPSLAKQSEIVEIFGSELFDIYREDKKFINEGLALINLFESNIERSDHPYYRNT HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PYRVEFIESHHHNFMALLQLSLVYESNPRLSFVSRNLSQPFFHGLSLVVAFSSGDQIVGH CEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHCEEEEEEECCCCCCCCC SLFCRSQGKIALEFMNDEVDLFEVINHNSQALPDTLMVFSSFGVTPYIENYMMSVYLNEL CEEECCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH AASRSLKFLSFNICDESLKRKLTQFKLPIFKVRTIEGCCKPIKNYSFFSSRTEVMANRNL HHHCCEEEEEEHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCE LKLSVIPSSKSQTIDPIFFMQLETPI EEEEEECCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA