Click here to switch to the map view.

The map label for this gene is yhiX [C]

Identifier: 126174343

GI number: 126174343

Start: 2467138

End: 2467530

Strand: Direct

Name: yhiX [C]

Synonym: Sbal_2125

Alternate gene names: 126174343

Gene position: 2467138-2467530 (Clockwise)

Preceding gene: 126174342

Following gene: 126174344

Centisome position: 48.12

GC content: 48.6

Gene sequence:

>393_bases
GTGACTCATTCTACTTTTCATTCTGTCATTCCGCGCCAAGGTCACTTTCAATCGCCACGCTATGCACTGTTTGCAAGTGA
GTATAGGCTCGGGTTGGCGGCGGGCATTCGTTTGTCGCTGATGCGGGAAAACTTAAGTTTGCCAGAGATGGCAGAAAAAC
TATCGATGAGCCCTGCGACCTTAAAGCGCCGCTTGGCTGAAATGGATTTAAGCTTTGGCCAACTCGCCGATGAAACACGT
TTAATCAAAGCCCTGTATTATTTAGCCACACCTTCGCAGGACGCCCAAAGTATTGCCAATTCACTGTCCTTCAGCGACGC
CAGTAATTTCAGGCGTTCTTTTAAACGCTGGACGGGCCAATTACCAACCTATTTTCGCAGTTGGCTGGCTTAA

Upstream 100 bases:

>100_bases
CCACCAGCCAATCTTGTTTTTTGCCGTGAATGCTCGCACCTTGGTAGAGTGAAACCCCTTCAACATCGGTAGCTTTGAAT
CACAACCCGCACCTCACGTT

Downstream 100 bases:

>100_bases
GTCATAAGCGAGTAACAAGACGTCCTGCCTGTATTTCCAAGCGTATTCTTTGTTTTTTATTTATTCAAAGCGTGAATTTT
TATGCCTTAAAAGTGAAGTT

Product: helix-turn-helix domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; Helix-Turn-Helix- Domain Containing Protein AraC Type; Transcriptional Regulator AraC Family Protein; Transcriptional Regulator OruR; AraC Family Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 130; Mature: 129

Protein sequence:

>130_residues
MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRENLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETR
LIKALYYLATPSQDAQSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA

Sequences:

>Translated_130_residues
MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRENLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETR
LIKALYYLATPSQDAQSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA
>Mature_129_residues
THSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRENLSLPEMAEKLSMSPATLKRRLAEMDLSFGQLADETRL
IKALYYLATPSQDAQSIANSLSFSDASNFRRSFKRWTGQLPTYFRSWLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14824; Mature: 14693

Theoretical pI: Translated: 10.50; Mature: 10.50

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRENLSLPEMAEKLSMSPAT
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
LKRRLAEMDLSFGQLADETRLIKALYYLATPSQDAQSIANSLSFSDASNFRRSFKRWTGQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
LPTYFRSWLA
CHHHHHHHCC
>Mature Secondary Structure 
THSTFHSVIPRQGHFQSPRYALFASEYRLGLAAGIRLSLMRENLSLPEMAEKLSMSPAT
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHH
LKRRLAEMDLSFGQLADETRLIKALYYLATPSQDAQSIANSLSFSDASNFRRSFKRWTGQ
HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCC
LPTYFRSWLA
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA