| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173961
Identifier: 126173961
GI number: 126173961
Start: 2015237
End: 2016913
Strand: Reverse
Name: 126173961
Synonym: Sbal_1732
Alternate gene names: NA
Gene position: 2016913-2015237 (Counterclockwise)
Preceding gene: 126173962
Following gene: 126173960
Centisome position: 39.34
GC content: 50.51
Gene sequence:
>1677_bases ATGCGACGTCTGTATCCACTCTGTGCGCTGGCTATGCTCAGTGCCTGTAGTCCGAATGCATCAGAGCCCGATGGCAACAG CACTTTGGCTGAACTCAAACCAGTACAGTTTAATGAAGCGCGCTTTAGAAATGATATTAAAGCCCTGTCATCCGATGAAT TTGAAGGCCGCGCGCCCACCACTCACGGTGAAAAACTCACCTTGGATTATTTGACCAAAGCCTTTACAGAGATGGGACTC AAGGGCGCGTACCAAGGCAGCTTTTTACAACCTGTGCCTATGGTGAGCTATACCGCAGATGAAGCGCAGCAAGTCACGCT GGCAGGATTACCTTTTAAATACCGTAAAGATCTGGTGCTCAGCAGTCGCCACGATAACGGTGGCATTAACATTGAAAACG CGCCATTAGTCTTCGTCGGCTATGGGGTGAACGCACCCGAATATGGTTGGAATGATTACCAAGATCTCGACATGAAAGGC AAAATCGCGGTGATCTTAGTTAACGATCCCGGCTTTGCCCGCCCTGACTCGGGTAAATTCAACGGCAAAGCCATGACCTA TTACGGCCGTTGGAGCTACAAGTTTGAAGAGGCCAGTCGTCAAGGCGCCCTTGGTGCACTGATCATCCATGATACTGAGC CCGCCTCTTATCCTTGGTCTGTGGTAGAAAATAGCTGGACTGGGCCACAGCAAGATCTGGTGCTGAGTAAAGCTGAGCAA GATAGCCGCATTCAAGTCGAAGGCTGGCTTACATTAGACGCAGCAACCCAACTTTTTGATAAATCTGGTTTATCACTACC GAGCTTGATGGCGCGCGCCGCCGACAGCCCAATCAATGTCCCCCTAGAGCAAACTGCCAGTATCGCCTTTAAAAATAAAG CCGAATACGCGAATAGCTACAACGTGGTTGCCACGCTCCCCGGCAGCACACAAGCCGACAAGCAAATCCTCTACACCGCC CATTGGGATCACATAGGTAAAGACGAGACGAAAGCAGGCGATCAGATTTACAACGGCGCCATGGACAATGCCTCAGGCAC TGCCGGTATTCTCGAAATCGCCAGACAATTAGCCGATAATGCGAAACAAGGCCACGGTTTAGCGCGCTCGGTCACCTTTA TTGCCACAACAGGCGAAGAACAAGGCTTACTCGGTTCGCGCTATTACGCTGCCAATCCACTTTATCCTATCGACAAAACC GTGGCAGTGTTAAACCTCGACAGCACCAATATCTACGGCAAAACCAAGAATTTTACGATTGTCGGCAAAGGGAAATCTGA GTTAGAAACTTACCTTATTGATGCGGCGAAACAACAGAACCGCATCGCCATGGGTGAGAAAAATCCCGCTTCGGGCGGTT TCTTCCGTTCAGATCATTTCAGCTTTGCCAAACTGGGCGTCCCAGCCGTCTTTGCCGGCGGCGGTAGCGACCCCGTTGAT GAGGCCACGGCGGCTTATAAAACTCAGATGCAAGCCACAATGAAAGGCTGTTATCACAATGTCTGCGATGAATACCATGA AGACTGGGATTTGAGCGGCGCGCTGCAAGATTTGCAAATCTACTACCAAGTCACGCGCACATTGGGCAACAGCAAAGATT GGCCGGGATACTATCAAGGCACAGAGTTCAATAGCCTGCGCCCAGCTAAAACGACGCTTATGACGGACGCCAAATAA
Upstream 100 bases:
>100_bases GCCTTGTGGCTCGCAGCGGCTTGCTTCATGATAAGTCTCGCTTCTGATTGATTAACAGAAATCTAAAATTCCTTAATTAA AACAACAGTAGGATTAACCT
Downstream 100 bases:
>100_bases CAGGCTGAGTCAGCCGTCTCTTATTGACGCATACTAGCAGCACCAGCTGAATAAATCGCTTCCTCAGCCAGCCAAAGCGC CAGACAAGATTGAAAAGCAC
Product: peptidase M28
Products: NA
Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Peptidase Family M; Glutamate Carboxypeptidase II; Aminopeptidase Family; M28 Family Aminopeptidase; M23B Family Peptidase; M20/M25/M40 Family Peptidase; Protein Containing Aminopeptidase Domain; Component Of l Biopolymer Transport System; WD40-Like Beta Propeller; PDZ Domain-Containing Protein
Number of amino acids: Translated: 558; Mature: 558
Protein sequence:
>558_residues MRRLYPLCALAMLSACSPNASEPDGNSTLAELKPVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLDYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKSGLSLPSLMARAADSPINVPLEQTASIAFKNKAEYANSYNVVATLPGSTQADKQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTKNFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYHEDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLMTDAK
Sequences:
>Translated_558_residues MRRLYPLCALAMLSACSPNASEPDGNSTLAELKPVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLDYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKSGLSLPSLMARAADSPINVPLEQTASIAFKNKAEYANSYNVVATLPGSTQADKQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTKNFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYHEDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLMTDAK >Mature_558_residues MRRLYPLCALAMLSACSPNASEPDGNSTLAELKPVQFNEARFRNDIKALSSDEFEGRAPTTHGEKLTLDYLTKAFTEMGL KGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVLSSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKG KIAVILVNDPGFARPDSGKFNGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ DSRIQVEGWLTLDAATQLFDKSGLSLPSLMARAADSPINVPLEQTASIAFKNKAEYANSYNVVATLPGSTQADKQILYTA HWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADNAKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKT VAVLNLDSTNIYGKTKNFTIVGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EATAAYKTQMQATMKGCYHNVCDEYHEDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQGTEFNSLRPAKTTLMTDAK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61054; Mature: 61054
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLYPLCALAMLSACSPNASEPDGNSTLAELKPVQFNEARFRNDIKALSSDEFEGRAPT CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC THGEKLTLDYLTKAFTEMGLKGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVL CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHCCEEE SSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKGKIAVILVNDPGFARPDSGKF ECCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ CCEEEEEEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHEECCCC DSRIQVEGWLTLDAATQLFDKSGLSLPSLMARAADSPINVPLEQTASIAFKNKAEYANSY CCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHEEECCCHHHCCCC NVVATLPGSTQADKQILYTAHWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADN EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH AKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKTVAVLNLDSTNIYGKTKNFTI HHHCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCEEECCCCEEE VGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCHHHCCCCEEEECCCCCCHH EATAAYKTQMQATMKGCYHNVCDEYHEDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC TEFNSLRPAKTTLMTDAK CCCCCCCCCHHEEEECCC >Mature Secondary Structure MRRLYPLCALAMLSACSPNASEPDGNSTLAELKPVQFNEARFRNDIKALSSDEFEGRAPT CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCC THGEKLTLDYLTKAFTEMGLKGAYQGSFLQPVPMVSYTADEAQQVTLAGLPFKYRKDLVL CCCCEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCHHHHCCEEE SSRHDNGGINIENAPLVFVGYGVNAPEYGWNDYQDLDMKGKIAVILVNDPGFARPDSGKF ECCCCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC NGKAMTYYGRWSYKFEEASRQGALGALIIHDTEPASYPWSVVENSWTGPQQDLVLSKAEQ CCEEEEEEECEEEEHHHHCCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCHHHHEECCCC DSRIQVEGWLTLDAATQLFDKSGLSLPSLMARAADSPINVPLEQTASIAFKNKAEYANSY CCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHEEECCCHHHCCCC NVVATLPGSTQADKQILYTAHWDHIGKDETKAGDQIYNGAMDNASGTAGILEIARQLADN EEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH AKQGHGLARSVTFIATTGEEQGLLGSRYYAANPLYPIDKTVAVLNLDSTNIYGKTKNFTI HHHCCCCEEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCEEECCCCEEE VGKGKSELETYLIDAAKQQNRIAMGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSDPVD EECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEECCCCCHHHCCCCEEEECCCCCCHH EATAAYKTQMQATMKGCYHNVCDEYHEDWDLSGALQDLQIYYQVTRTLGNSKDWPGYYQG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC TEFNSLRPAKTTLMTDAK CCCCCCCCCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA