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The map label for this gene is nagD [H]

Identifier: 126173962

GI number: 126173962

Start: 2017156

End: 2017902

Strand: Reverse

Name: nagD [H]

Synonym: Sbal_1733

Alternate gene names: 126173962

Gene position: 2017902-2017156 (Counterclockwise)

Preceding gene: 126173963

Following gene: 126173961

Centisome position: 39.36

GC content: 48.59

Gene sequence:

>747_bases
ATGAAAAATATTATCTGCGATATCGATGGTGTACTACTGCACGACAATAAACTGATCCCCGGCAGCGACAAATTTATCCA
GCGTATTTTAGAACAAGGCAATCCGTTAGTCGTCCTGACTAACTATCCCGTACAAACGGGAAAGGATCTGCAAAACCGTT
TAAGCGCCGCCGGTATTGATATTCCTGAAGAATGCTTTTATACCTCCGCCATGGCAACCGCTGACTTTTTACAGCACCAA
GAAGGCAGTAAAGCCTATGTCATTGGTGAAGGCGCCCTCACCCATGAACTCTACAAAGCAGGCTTTACCATTACCGATAT
CAACCCTGACTTTGTGATTGTCGGTGAAACCCGCTCCTACAATTGGGAAATGATCCATAAAGCCGCAGCCTTTGTGGCAG
GTGGCGCCCGCTTTATTGCCACCAACCCTGACACTCACGGCCCAGCTTACAGCCCTGCCTGTGGCGCCCTATGTTCGCCA
ATCGAGCGTATTACCGGTAAAAAACCTTTCTACGTGGGTAAACCGAGCGCTTGGATTATTCGCTCAGCGCTTAATCATAT
TGATGGGCACTCGGAAGACACTGTCATCATAGGCGACAATATGCGTACCGATATTTTAGCGGGCTTCCAAGCTGGGCTTG
AAACCATTCTGGTCACCAGTGGCGTAAGTAAGCTTGAAGATATCGACAAAGAACCGTTCCGCCCTAACCACGTATTTGCC
TGCGCGGGCGACATCGATGTTGTTTAA

Upstream 100 bases:

>100_bases
TTTTAACTATTTCCCACAAAAGCATTGTTTTCTAGGGCAATGTGGCATTAGATAACTTAACGAAAAGTGATTTTTGCTCG
GCATGACAAGAGACTATTAG

Downstream 100 bases:

>100_bases
ACAATTATTTAAACCTTTGTCTAAGCCTGCGTAGCCACTCATTCTTGCAAGTCATTCCAACATTACCTATGCAACACGCC
CAGCCCAAAGGCGTATTGCA

Product: UMP phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVVLTNYPVQTGKDLQNRLSAAGIDIPEECFYTSAMATADFLQHQ
EGSKAYVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAAFVAGGARFIATNPDTHGPAYSPACGALCSP
IERITGKKPFYVGKPSAWIIRSALNHIDGHSEDTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA
CAGDIDVV

Sequences:

>Translated_248_residues
MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVVLTNYPVQTGKDLQNRLSAAGIDIPEECFYTSAMATADFLQHQ
EGSKAYVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAAFVAGGARFIATNPDTHGPAYSPACGALCSP
IERITGKKPFYVGKPSAWIIRSALNHIDGHSEDTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA
CAGDIDVV
>Mature_248_residues
MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVVLTNYPVQTGKDLQNRLSAAGIDIPEECFYTSAMATADFLQHQ
EGSKAYVIGEGALTHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAAFVAGGARFIATNPDTHGPAYSPACGALCSP
IERITGKKPFYVGKPSAWIIRSALNHIDGHSEDTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA
CAGDIDVV

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI10092677, Length=248, Percent_Identity=24.5967741935484, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI108796653, Length=260, Percent_Identity=26.5384615384615, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI14149777, Length=247, Percent_Identity=25.1012145748988, Blast_Score=77, Evalue=1e-14,
Organism=Escherichia coli, GI1786890, Length=248, Percent_Identity=71.3709677419355, Blast_Score=391, Evalue=1e-110,
Organism=Caenorhabditis elegans, GI17562458, Length=286, Percent_Identity=26.2237762237762, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17560956, Length=286, Percent_Identity=26.2237762237762, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17558880, Length=265, Percent_Identity=26.7924528301887, Blast_Score=84, Evalue=9e-17,
Organism=Saccharomyces cerevisiae, GI6319965, Length=234, Percent_Identity=23.5042735042735, Blast_Score=71, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666141, Length=254, Percent_Identity=27.9527559055118, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24656326, Length=254, Percent_Identity=24.0157480314961, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI24656330, Length=251, Percent_Identity=25.0996015936255, Blast_Score=71, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26933; Mature: 26933

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVVLTNYPVQTGKDLQNRLSAAGID
CCCEEEECCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC
IPEECFYTSAMATADFLQHQEGSKAYVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWEMIHKAAAFVAGGARFIATNPDTHGPAYSPACGALCSPIERITGKKPFYVGKPSAWII
CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHH
RSALNHIDGHSEDTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA
HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCEEEE
CAGDIDVV
ECCCCCCC
>Mature Secondary Structure
MKNIICDIDGVLLHDNKLIPGSDKFIQRILEQGNPLVVLTNYPVQTGKDLQNRLSAAGID
CCCEEEECCCEEEECCEECCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHCCCC
IPEECFYTSAMATADFLQHQEGSKAYVIGEGALTHELYKAGFTITDINPDFVIVGETRSY
CCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCCCC
NWEMIHKAAAFVAGGARFIATNPDTHGPAYSPACGALCSPIERITGKKPFYVGKPSAWII
CHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCHHHHH
RSALNHIDGHSEDTVIIGDNMRTDILAGFQAGLETILVTSGVSKLEDIDKEPFRPNHVFA
HHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHEEECCCCHHHHHCCCCCCCCCEEEE
CAGDIDVV
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]