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The map label for this gene is yccT [C]

Identifier: 126173860

GI number: 126173860

Start: 1897812

End: 1898501

Strand: Reverse

Name: yccT [C]

Synonym: Sbal_1626

Alternate gene names: 126173860

Gene position: 1898501-1897812 (Counterclockwise)

Preceding gene: 126173861

Following gene: 126173859

Centisome position: 37.03

GC content: 46.23

Gene sequence:

>690_bases
TTGAAATCACTTTTGCCAATCAGCAGCCTGCTAGTATTACTCGGTTCTGCTTCAGCTTTCGCCGCAGATCTCAACATTCC
GATGTCATTTGAGTACCTTGCACTCGATGGTAAAAAAGTCGAGTCTAGCGTGTTCAATCATAAAAGCAGCTTAGAATTGA
CACCTGGTACTCATAAAATCGCCATTCGTTACCATGAGATGGTTGAAGACGATTTTAGCGATAGCCAAACCTTTGTTAAA
TCAGCCCCTTTCATCGTGACCTTAGACGTTGATGGCGACTATCAATATTACCTCCAAGCCGCCGAAGGCAAAGTCGTTAA
AAAGCCAAAAGTTTACGCGCAAAACCCACAAATCAAATTGACCCGTGGCGACAAAGGCGACGTCAATTTCCAAGTGGTGA
ATACCAATTTAGAAGAAGAAAGCTTTGTCTCTCGTCTTTTCAGTGGTAATCAAGCCGTTGACGTATCGGGAACTGCCGCG
GCAGCAACCGGTGCAGCAGGCGCAGTGGTTGCCGTTGCACCAGCACCCGTGGCAACATCGGCTACCGTTAGCGCGACGTC
ACTCACAGCTCCTGTAGACACTTCTAAAGCAACAGCTGCCAATCCACAACAAATGTTGCAATACTGGTGGTTACAAGCGG
ATGAGAAAACACGTAAAGAATTTATGAGCTGGGCAATTTCACAGCTATAA

Upstream 100 bases:

>100_bases
CGTCGTCTAGGAAAATGCAGGCAAGCTATTAGTTATATAGAAGATCGCATTCAAATATTCGAACGTCCGTATCAGAGTAA
TAATCGTTAAGGAGTAACAA

Downstream 100 bases:

>100_bases
CGACTTGCGATAACGAGGTTTAGTCAATATTGACTCTGATCCCACTGGTTTATCACGCCAGCTATTCCAAGCTGGCGCTT
CCTCCTCACCACAGATTCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELTPGTHKIAIRYHEMVEDDFSDSQTFVK
SAPFIVTLDVDGDYQYYLQAAEGKVVKKPKVYAQNPQIKLTRGDKGDVNFQVVNTNLEEESFVSRLFSGNQAVDVSGTAA
AATGAAGAVVAVAPAPVATSATVSATSLTAPVDTSKATAANPQQMLQYWWLQADEKTRKEFMSWAISQL

Sequences:

>Translated_229_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELTPGTHKIAIRYHEMVEDDFSDSQTFVK
SAPFIVTLDVDGDYQYYLQAAEGKVVKKPKVYAQNPQIKLTRGDKGDVNFQVVNTNLEEESFVSRLFSGNQAVDVSGTAA
AATGAAGAVVAVAPAPVATSATVSATSLTAPVDTSKATAANPQQMLQYWWLQADEKTRKEFMSWAISQL
>Mature_229_residues
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELTPGTHKIAIRYHEMVEDDFSDSQTFVK
SAPFIVTLDVDGDYQYYLQAAEGKVVKKPKVYAQNPQIKLTRGDKGDVNFQVVNTNLEEESFVSRLFSGNQAVDVSGTAA
AATGAAGAVVAVAPAPVATSATVSATSLTAPVDTSKATAANPQQMLQYWWLQADEKTRKEFMSWAISQL

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=228, Percent_Identity=24.5614035087719, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1615_SHEB8 (A6WLS3)

Other databases:

- EMBL:   CP000753
- RefSeq:   YP_001365825.1
- STRING:   A6WLS3
- GeneID:   5371391
- GenomeReviews:   CP000753_GR
- KEGG:   sbm:Shew185_1615
- HOGENOM:   HBG678276
- OMA:   FMSWAIK
- ProtClustDB:   CLSK906444
- BioCyc:   SBAL402882:SHEW185_1615-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 24659; Mature: 24659

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELTPGTHKI
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEEECCCCEEE
AIRYHEMVEDDFSDSQTFVKSAPFIVTLDVDGDYQYYLQAAEGKVVKKPKVYAQNPQIKL
EEEEHHHHCCCCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCEEECCEEEECCCCEEE
TRGDKGDVNFQVVNTNLEEESFVSRLFSGNQAVDVSGTAAAATGAAGAVVAVAPAPVATS
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHCCCCCCEEEEEECCCCCCC
ATVSATSLTAPVDTSKATAANPQQMLQYWWLQADEKTRKEFMSWAISQL
CEEEECEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSLLPISSLLVLLGSASAFAADLNIPMSFEYLALDGKKVESSVFNHKSSLELTPGTHKI
CCCCCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCHHHHHHHCCCCCEEECCCCEEE
AIRYHEMVEDDFSDSQTFVKSAPFIVTLDVDGDYQYYLQAAEGKVVKKPKVYAQNPQIKL
EEEEHHHHCCCCCCCHHHHHCCCEEEEEEECCCEEEEEEECCCCEEECCEEEECCCCEEE
TRGDKGDVNFQVVNTNLEEESFVSRLFSGNQAVDVSGTAAAATGAAGAVVAVAPAPVATS
EECCCCCEEEEEEECCCCHHHHHHHHHCCCCEEECCCCCHHCCCCCCEEEEEECCCCCCC
ATVSATSLTAPVDTSKATAANPQQMLQYWWLQADEKTRKEFMSWAISQL
CEEEECEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA