| Definition | Shewanella baltica OS155 chromosome, complete genome. |
|---|---|
| Accession | NC_009052 |
| Length | 5,127,376 |
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The map label for this gene is 126173861
Identifier: 126173861
GI number: 126173861
Start: 1898512
End: 1899174
Strand: Reverse
Name: 126173861
Synonym: Sbal_1627
Alternate gene names: NA
Gene position: 1899174-1898512 (Counterclockwise)
Preceding gene: 126173862
Following gene: 126173860
Centisome position: 37.04
GC content: 44.19
Gene sequence:
>663_bases GTGAACACCCAACAATTACTGGTGATGCTGAAAAATCAGCTCAAAGCGCTAGAGCAAGAAGTACTGCAGCACGATAATCG ACTCGCGCCGCCGCAGCGTAAACTCCTGCAAGAAACGGAGCGCTTTAATCATTCGCTATTTGTCCAACACGGCGCCCAAC TCGGCCCTTGTATTGAACAAATTCGTAGTAGCATTATACAGCTCGAAAAACAAATTAAGCTCAAACTCGCCCCCCAGACG ATTGCCCTCAGCTGTGAGCGGATCCAAGACAGATTCACCGCCGTCAAACGGGCCTTGCTGACGACCTCTATCGACATTAA GTCCAAAACTCAGCAACGTGCCAGTAGCCGCGCCCGTTTTGCTCAGCGTCAGAATCAGTCTCACCAAGCCAGTGGTTTCG ATTGGATCGCCAATAACGTGATGCAAAATAGTCACGAGATCTATGAAGAATTGAACAAACACCTGAATTGGGCGAAAAAA TTTGAACAAAAAATTGAAGAAATGGAATCAAAACTTGAAAACTGTCATAGTGCTGACAAAATAAAATTGCAAAATGACAT CCTTTTGATGCATCGTCGTCTAGGAAAATGCAGGCAAGCTATTAGTTATATAGAAGATCGCATTCAAATATTCGAACGTC CGTATCAGAGTAATAATCGTTAA
Upstream 100 bases:
>100_bases GCGCCCGCTGCGCGATTAAATTTGGCATGCCCTTTATTCGTCCACTGTTTATTTTGATCGTGCTAATGATTGCAGCAAAT TTGGCATGGAGCGCATGGTT
Downstream 100 bases:
>100_bases GGAGTAACAATTGAAATCACTTTTGCCAATCAGCAGCCTGCTAGTATTACTCGGTTCTGCTTCAGCTTTCGCCGCAGATC TCAACATTCCGATGTCATTT
Product: primosomal replication protein N''
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNTQQLLVMLKNQLKALEQEVLQHDNRLAPPQRKLLQETERFNHSLFVQHGAQLGPCIEQIRSSIIQLEKQIKLKLAPQT IALSCERIQDRFTAVKRALLTTSIDIKSKTQQRASSRARFAQRQNQSHQASGFDWIANNVMQNSHEIYEELNKHLNWAKK FEQKIEEMESKLENCHSADKIKLQNDILLMHRRLGKCRQAISYIEDRIQIFERPYQSNNR
Sequences:
>Translated_220_residues MNTQQLLVMLKNQLKALEQEVLQHDNRLAPPQRKLLQETERFNHSLFVQHGAQLGPCIEQIRSSIIQLEKQIKLKLAPQT IALSCERIQDRFTAVKRALLTTSIDIKSKTQQRASSRARFAQRQNQSHQASGFDWIANNVMQNSHEIYEELNKHLNWAKK FEQKIEEMESKLENCHSADKIKLQNDILLMHRRLGKCRQAISYIEDRIQIFERPYQSNNR >Mature_220_residues MNTQQLLVMLKNQLKALEQEVLQHDNRLAPPQRKLLQETERFNHSLFVQHGAQLGPCIEQIRSSIIQLEKQIKLKLAPQT IALSCERIQDRFTAVKRALLTTSIDIKSKTQQRASSRARFAQRQNQSHQASGFDWIANNVMQNSHEIYEELNKHLNWAKK FEQKIEEMESKLENCHSADKIKLQNDILLMHRRLGKCRQAISYIEDRIQIFERPYQSNNR
Specific function: Unknown
COG id: COG3923
COG function: function code L; Primosomal replication protein N''
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25882; Mature: 25882
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTQQLLVMLKNQLKALEQEVLQHDNRLAPPQRKLLQETERFNHSLFVQHGAQLGPCIEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHH IRSSIIQLEKQIKLKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKTQQRASSRARF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AQRQNQSHQASGFDWIANNVMQNSHEIYEELNKHLNWAKKFEQKIEEMESKLENCHSADK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKLQNDILLMHRRLGKCRQAISYIEDRIQIFERPYQSNNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNTQQLLVMLKNQLKALEQEVLQHDNRLAPPQRKLLQETERFNHSLFVQHGAQLGPCIEQ CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHCCCCCCHHHHH IRSSIIQLEKQIKLKLAPQTIALSCERIQDRFTAVKRALLTTSIDIKSKTQQRASSRARF HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH AQRQNQSHQASGFDWIANNVMQNSHEIYEELNKHLNWAKKFEQKIEEMESKLENCHSADK HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKLQNDILLMHRRLGKCRQAISYIEDRIQIFERPYQSNNR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA