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The map label for this gene is yecD [C]

Identifier: 125624341

GI number: 125624341

Start: 1509961

End: 1510542

Strand: Reverse

Name: yecD [C]

Synonym: llmg_1538

Alternate gene names: 125624341

Gene position: 1510542-1509961 (Counterclockwise)

Preceding gene: 125624342

Following gene: 125624340

Centisome position: 59.72

GC content: 34.02

Gene sequence:

>582_bases
ATGGAAGAAAATCTAAAAGACTTTCTTATAACGAAAAGAGAAGCAATGCAAAATTCAGCATTAATTATTATTGATTTACA
AGCATTCATTAAGAAATTAGCAAAAAAAGCTGAACCTTATGGTTGGGATAAAATCATTGAGAACAATCGAGCGCTGATTG
CCGCTTTTGACCAAGCAAATCAGCCGGTTTATTTAGTGACAGTTGAGCCAAAAATACTTTGGAAATCCGCTAAAGAAGCT
TTTTCTCGCATGATTCTACAAGATGAATTAGATAATAATTCAAGATCGCATAAGTTAGTAAAATTTGGCCCATCAGCATT
TAAACAATCAGACGATGACTTAGCTGATGAGCTAAAAAAACTTTCTGTCAGTAAAATCTATGTTACTGGGGTTTCGATGA
GTAATGGTGTCGTCAAAACAGCCAAGGATGGAGCTGAATCTGCTTTTGAGTCTTTCATTATCGAAGATGCTTGCGCTGAC
AGAAAGTTAAAAAACTACCAGAAAACGCTGACAGAAATTCCTGAATTTGGGAAAGTAATTAAAACAAAAGAAATTATTGA
GGAACTAAATAAAAATGTCTGA

Upstream 100 bases:

>100_bases
AATGTGAAATTTACGATGGAAGAAGATACAGCTTTCTAAACAATTTTATTCAAATAATTACCTCGATTTTTCGAGGTTTT
TTGTTTTAATTTGTGATAAA

Downstream 100 bases:

>100_bases
GAAATATGTCGTATTTGACTTTGAAACCACAGGATTTTCTGCACAAAAAAATGAAATTATTCAAATTGGTGCGGTAAAAT
ATGATGAAAATAATCAAGAA

Product: putative isochorismatase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MEENLKDFLITKREAMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQANQPVYLVTVEPKILWKSAKEA
FSRMILQDELDNNSRSHKLVKFGPSAFKQSDDDLADELKKLSVSKIYVTGVSMSNGVVKTAKDGAESAFESFIIEDACAD
RKLKNYQKTLTEIPEFGKVIKTKEIIEELNKNV

Sequences:

>Translated_193_residues
MEENLKDFLITKREAMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQANQPVYLVTVEPKILWKSAKEA
FSRMILQDELDNNSRSHKLVKFGPSAFKQSDDDLADELKKLSVSKIYVTGVSMSNGVVKTAKDGAESAFESFIIEDACAD
RKLKNYQKTLTEIPEFGKVIKTKEIIEELNKNV
>Mature_193_residues
MEENLKDFLITKREAMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQANQPVYLVTVEPKILWKSAKEA
FSRMILQDELDNNSRSHKLVKFGPSAFKQSDDDLADELKKLSVSKIYVTGVSMSNGVVKTAKDGAESAFESFIIEDACAD
RKLKNYQKTLTEIPEFGKVIKTKEIIEELNKNV

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21846; Mature: 21846

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEENLKDFLITKREAMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQAN
CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCC
QPVYLVTVEPKILWKSAKEAFSRMILQDELDNNSRSHKLVKFGPSAFKQSDDDLADELKK
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCHHHHHHHHH
LSVSKIYVTGVSMSNGVVKTAKDGAESAFESFIIEDACADRKLKNYQKTLTEIPEFGKVI
HHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTKEIIEELNKNV
HHHHHHHHHHCCC
>Mature Secondary Structure
MEENLKDFLITKREAMQNSALIIIDLQAFIKKLAKKAEPYGWDKIIENNRALIAAFDQAN
CCCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCHHHHCCCCEEEEEECCCC
QPVYLVTVEPKILWKSAKEAFSRMILQDELDNNSRSHKLVKFGPSAFKQSDDDLADELKK
CCEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHCCCCHHHHHHHHH
LSVSKIYVTGVSMSNGVVKTAKDGAESAFESFIIEDACADRKLKNYQKTLTEIPEFGKVI
HHHHEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTKEIIEELNKNV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA