| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485571
Identifier: 124485571
GI number: 124485571
Start: 732773
End: 733546
Strand: Reverse
Name: 124485571
Synonym: Mlab_0749
Alternate gene names: NA
Gene position: 733546-732773 (Counterclockwise)
Preceding gene: 124485572
Following gene: 124485566
Centisome position: 40.64
GC content: 49.87
Gene sequence:
>774_bases ATGAACCAGAAACTAACCGTAAAAGACGTAATGTCCAAACCCGTTTCGATTGCAAAATCTGCACTGATCCCGGAAGCTCT TTCAAAGATGCTGGCAGAAGGGATCGATCCGATCGTCGTCACTAACGACCACGTAGTCGTAGGTACGGCAGCACGTAGGA CCATCGCAGAAAAGATGGGAAGCAAAAAAACCGGCAATATTCCGGCATCCCAGATTCGCGTTGCAAGCGTCACGAAAGAG GACTTTACCTCGGTTTATCAGGATCAGGACGCGGAGTTACTCGTCCCGCTTCTCCAAAGATACAAGGTTGTTATTGTTTG GGATGAAGAACACCGTCTCATAGGTCAGGTCACGAAAGGCGACCTGCTGAGACATATGGTTCCCGAAGGACCGCTGGATA CATTCACCGAGATTGCTCCCCGTATCACGCCGGACGACCGCCTCGTCCAGCTTCACCGCAGAATGGCAAACAACGGCGCA ACCCGGTTTATCGTGATGGACGGAAATAAATCCGTCGGTATTGTCACGGAAACGGATATTGCAAAGGTCCTCGTAAAACT GAAAAGCGAGATCGACAAACACTTCGACAATGCGCTCCGAAACGTAACCGCAGGGGACATCATGTCAACACCCCTCATTA CTGTGCAGACGAACACCCCTGTCTCCAAAGTAGTGGACATGATGCTTACGAAAAATATCAGTACCGTTCCGATCGCTGAA GGTGAGAAGGTCGTTGGATTCATTACCAGAAAATCCCTGGTGAATGCACTCTGA
Upstream 100 bases:
>100_bases GTGGAAACCCGAAAACATCCTCTGCAGGCGTTGGACTGCAAAGCAAAACGATGTTTTCCGCCGCACGATTGAATAAAACT CTTCAAAGGAGGAAGCAAAC
Downstream 100 bases:
>100_bases CCACCTCTCTTTTTTTATATAATATTTGTATCCGGCGAAAAATTACCAGACCCTGCCGTCCACGCGTTTCGAACTCTTTG CCGGGGAAAGTTTTCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal-Transduction Protein; CBS Domain-Containing Membrane Protein; IMP Dehydrogenase Related Protein; Signal Transduction Protein With Cbs Domains; CBS Domain Containing Membrane Protein; Transcriptional Regulator XRE Family; Inosine-5-Monophosphate Dehydrogenase Related Protein I
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MNQKLTVKDVMSKPVSIAKSALIPEALSKMLAEGIDPIVVTNDHVVVGTAARRTIAEKMGSKKTGNIPASQIRVASVTKE DFTSVYQDQDAELLVPLLQRYKVVIVWDEEHRLIGQVTKGDLLRHMVPEGPLDTFTEIAPRITPDDRLVQLHRRMANNGA TRFIVMDGNKSVGIVTETDIAKVLVKLKSEIDKHFDNALRNVTAGDIMSTPLITVQTNTPVSKVVDMMLTKNISTVPIAE GEKVVGFITRKSLVNAL
Sequences:
>Translated_257_residues MNQKLTVKDVMSKPVSIAKSALIPEALSKMLAEGIDPIVVTNDHVVVGTAARRTIAEKMGSKKTGNIPASQIRVASVTKE DFTSVYQDQDAELLVPLLQRYKVVIVWDEEHRLIGQVTKGDLLRHMVPEGPLDTFTEIAPRITPDDRLVQLHRRMANNGA TRFIVMDGNKSVGIVTETDIAKVLVKLKSEIDKHFDNALRNVTAGDIMSTPLITVQTNTPVSKVVDMMLTKNISTVPIAE GEKVVGFITRKSLVNAL >Mature_257_residues MNQKLTVKDVMSKPVSIAKSALIPEALSKMLAEGIDPIVVTNDHVVVGTAARRTIAEKMGSKKTGNIPASQIRVASVTKE DFTSVYQDQDAELLVPLLQRYKVVIVWDEEHRLIGQVTKGDLLRHMVPEGPLDTFTEIAPRITPDDRLVQLHRRMANNGA TRFIVMDGNKSVGIVTETDIAKVLVKLKSEIDKHFDNALRNVTAGDIMSTPLITVQTNTPVSKVVDMMLTKNISTVPIAE GEKVVGFITRKSLVNAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28215; Mature: 28215
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKLTVKDVMSKPVSIAKSALIPEALSKMLAEGIDPIVVTNDHVVVGTAARRTIAEKMG CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHHHHHHHHHC SKKTGNIPASQIRVASVTKEDFTSVYQDQDAELLVPLLQRYKVVIVWDEEHRLIGQVTKG CCCCCCCCHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHH DLLRHMVPEGPLDTFTEIAPRITPDDRLVQLHRRMANNGATRFIVMDGNKSVGIVTETDI HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHH AKVLVKLKSEIDKHFDNALRNVTAGDIMSTPLITVQTNTPVSKVVDMMLTKNISTVPIAE HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC GEKVVGFITRKSLVNAL CCCEEHHHHHHHHHHCC >Mature Secondary Structure MNQKLTVKDVMSKPVSIAKSALIPEALSKMLAEGIDPIVVTNDHVVVGTAARRTIAEKMG CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEHHHHHHHHHHHC SKKTGNIPASQIRVASVTKEDFTSVYQDQDAELLVPLLQRYKVVIVWDEEHRLIGQVTKG CCCCCCCCHHHEEEECCCHHHHHHHHCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHH DLLRHMVPEGPLDTFTEIAPRITPDDRLVQLHRRMANNGATRFIVMDGNKSVGIVTETDI HHHHHHCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHH AKVLVKLKSEIDKHFDNALRNVTAGDIMSTPLITVQTNTPVSKVVDMMLTKNISTVPIAE HHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCC GEKVVGFITRKSLVNAL CCCEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA