| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485572
Identifier: 124485572
GI number: 124485572
Start: 733694
End: 734569
Strand: Reverse
Name: 124485572
Synonym: Mlab_0750
Alternate gene names: NA
Gene position: 734569-733694 (Counterclockwise)
Preceding gene: 124485579
Following gene: 124485571
Centisome position: 40.7
GC content: 52.63
Gene sequence:
>876_bases ATGACATCACCAGCAAAACAATCCAAAGGAAAAAAGAACAGCGTTCTTGATATCGCAAGTCTGAATGTCATCTCGGTGCC TCCAACGATGAGTATCATCGAAGGGATCCAGATGATGAGCCGGCACAACTTTCGTCGCCTGCCGATCACGGATCCCGGAA CCAAGAAACTTATTGGGATTGTAACGATCACTGATGTTATAGACATGATGGGAGGGGGCAGCAGATACAACCTTATTGCA AACAAGCATAAGGGAAATCTTCTGGCCGCCTTGAATGAGAGCCTGCGGGAGATCGCCACGGAAAACGTGACCGGCTTTTC GCCGGCGACGACCGTAAAAGAAGCGGCAAACATCCTTCTGGAAACAGGACATGGAGGTTTTCCGATTCTGAACCCCGACT CCACGATTGCGGGCATCGTCACAGAATACGATCTGATGCGGATGCTTGCCGGAACGGAGTCGGAACTGGTGGTCGACGAG ATCATGACCCCGTGTCCGAAGAAGGTCTCGCCCGATCTGCCTCTGAGCAACGTAACAAAACAGATTGTGGATGACGGATA CCGCCGGTTACCCGTAGTAAAAGACGGGATCCTGCTCGGTATGATCACGGCAACGGACATCATGGGCTATCTTGGAAACG GCAGAGTCTTTTCCGAGATGCACACCGGAACCGTTGATGAGGTCCTCAGCCTCCCGGTAAGGGATGTAATGACGGCTTCC GACATCAGAACGGTCGCAACCGACATGCCGATCAGCATTGTGGCACAAGAGATGCTGAACCGCGGGATCGGAGCCTTCCC CGTTATGGACGGAGGAAAGCTGAGCGGAATCGTGACCGAATTCGATCTGGTAAAGGCTCTCACAGGAACGATCTGA
Upstream 100 bases:
>100_bases TCGCGAATTTTCGCGCGATCGTAAAAAATACTCAAATCATAAGCCTATTAAGTCATGACAGAGCATTAACTCATTATACC ACCCTAGCGTTGGTAAAAAC
Downstream 100 bases:
>100_bases ACATTTCACCAAATGGCGCCTGAGAATATATGCAGGCGATTCACCTGGTGGAAACCCGAAAACATCCTCTGCAGGCGTTG GACTGCAAAGCAAAACGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MTSPAKQSKGKKNSVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGIVTITDVIDMMGGGSRYNLIA NKHKGNLLAALNESLREIATENVTGFSPATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDE IMTPCPKKVSPDLPLSNVTKQIVDDGYRRLPVVKDGILLGMITATDIMGYLGNGRVFSEMHTGTVDEVLSLPVRDVMTAS DIRTVATDMPISIVAQEMLNRGIGAFPVMDGGKLSGIVTEFDLVKALTGTI
Sequences:
>Translated_291_residues MTSPAKQSKGKKNSVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGIVTITDVIDMMGGGSRYNLIA NKHKGNLLAALNESLREIATENVTGFSPATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDE IMTPCPKKVSPDLPLSNVTKQIVDDGYRRLPVVKDGILLGMITATDIMGYLGNGRVFSEMHTGTVDEVLSLPVRDVMTAS DIRTVATDMPISIVAQEMLNRGIGAFPVMDGGKLSGIVTEFDLVKALTGTI >Mature_290_residues TSPAKQSKGKKNSVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGIVTITDVIDMMGGGSRYNLIAN KHKGNLLAALNESLREIATENVTGFSPATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDEI MTPCPKKVSPDLPLSNVTKQIVDDGYRRLPVVKDGILLGMITATDIMGYLGNGRVFSEMHTGTVDEVLSLPVRDVMTASD IRTVATDMPISIVAQEMLNRGIGAFPVMDGGKLSGIVTEFDLVKALTGTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 CBS domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 [H]
Pfam domain/function: PF00571 CBS [H]
EC number: NA
Molecular weight: Translated: 31152; Mature: 31021
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPAKQSKGKKNSVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGI CCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEH VTITDVIDMMGGGSRYNLIANKHKGNLLAALNESLREIATENVTGFSPATTVKEAANILL HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEE ETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDEIMTPCPKKVSPDLPLSNVTK ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHH QIVDDGYRRLPVVKDGILLGMITATDIMGYLGNGRVFSEMHTGTVDEVLSLPVRDVMTAS HHHHCHHHCCCEECCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHCCHHHHHHHH DIRTVATDMPISIVAQEMLNRGIGAFPVMDGGKLSGIVTEFDLVKALTGTI HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TSPAKQSKGKKNSVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGI CCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHEEEH VTITDVIDMMGGGSRYNLIANKHKGNLLAALNESLREIATENVTGFSPATTVKEAANILL HHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEE ETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDEIMTPCPKKVSPDLPLSNVTK ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCHHHHHH QIVDDGYRRLPVVKDGILLGMITATDIMGYLGNGRVFSEMHTGTVDEVLSLPVRDVMTAS HHHHCHHHCCCEECCCHHHHHHHHHHHHHHCCCCEEEEHHHCCCHHHHHHCCHHHHHHHH DIRTVATDMPISIVAQEMLNRGIGAFPVMDGGKLSGIVTEFDLVKALTGTI HHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]