| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485566
Identifier: 124485566
GI number: 124485566
Start: 728346
End: 728531
Strand: Reverse
Name: 124485566
Synonym: Mlab_0744
Alternate gene names: NA
Gene position: 728531-728346 (Counterclockwise)
Preceding gene: 124485571
Following gene: 124485565
Centisome position: 40.36
GC content: 50.0
Gene sequence:
>186_bases ATGGACCGAATCACCATACGCCTACCCCCGCAGCAGGTCGAACTGCTTGAAAAACTTGTCGAATCAGGCGAGTTTCCCAC CGTTTCCGAAGCAGTACGATATGCAGTAAGGGAGTTCCTCTCCCAGAGAGGAGATAGGATTATGCGTGACAGTGATCAGA TCTCCACGTTTGACGCACGATTATAA
Upstream 100 bases:
>100_bases ATCCAATTAGATTTTGTCCAAGATCAGACGTCAGCTTAATGTCTTACAAATGTCAGACAAATGGCAGACAAATGACAGAC ATTTGTCAGAATGGAGTAAA
Downstream 100 bases:
>100_bases GAGTAAAATTATTGGGGTGTTTACAAAAATGCAGAGTATTATCAATGAGGCACTGAAGAACTCGGAGCTCGAAAAAGGAA TGCAGACGACATCGATCGTC
Product: CopG family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; CopG Family Transcriptional Regulator; Transcriptional Regulator CopG Family
Number of amino acids: Translated: 61; Mature: 61
Protein sequence:
>61_residues MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQRGDRIMRDSDQISTFDARL
Sequences:
>Translated_61_residues MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQRGDRIMRDSDQISTFDARL >Mature_61_residues MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQRGDRIMRDSDQISTFDARL
Specific function: Unknown
COG id: COG3609
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7110; Mature: 7110
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQRGDRIMRDSDQISTFDAR CCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCC L C >Mature Secondary Structure MDRITIRLPPQQVELLEKLVESGEFPTVSEAVRYAVREFLSQRGDRIMRDSDQISTFDAR CCCEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA