Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
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Accession | NC_008942 |
Length | 1,804,962 |
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The map label for this gene is 124485530
Identifier: 124485530
GI number: 124485530
Start: 681568
End: 682416
Strand: Reverse
Name: 124485530
Synonym: Mlab_0707
Alternate gene names: NA
Gene position: 682416-681568 (Counterclockwise)
Preceding gene: 124485531
Following gene: 124485529
Centisome position: 37.81
GC content: 50.88
Gene sequence:
>849_bases ATGGCACTCAAATCGTTGTCGGAAGCGCTTGGCCTGCTCGTCAAAAAGCCGCTCGTCTGGATGCCGGGGCTTTTTGCCGC ATTTTCCATCCTGTTTACCTATTACATCATCACGCTTTTCGGGTCGGTAGCGGCATTAGCGGCAGGGATCATCCTTCTGC TGGTCTTCCCGGCATTTCTCGCAGGAACCTACGGGATCGTCATCGGGGAAAAATCATCCTCGGCCGATTTCAGAAAATAT GCGGTTTACGGATACTTCAGATGCCTTATCCCGAATGTTGTCGTTCTCATGATCGGATTCGTGCTTTCCAACACGCTGAC GTATATTCTGCTGATGCTCGGCATTTCCGTCGATACTGCGTTCTACTTCAGTATATTCCTGATCATCCCGCTGGTGTTCT TCTTCTACTTTGCCGACATCTCGGCAATGGTGAATAATTACGCGGCATTTCGGGCGATTAAAGACAGCGCACTCCGCGTG ACCACGGGTTCGATCTCGGTCACGGCGTTCTATCTATTTAACGTCGCGATCTTTTTCGCCGCGTCCTTTATCTTTTCCGC GATATGGTCGCTTTTAGCAGTGGATGTACTGACTCCGATCACGCAGATGACTGAATCCGAGATTCTGGCTATGTCCCAGG AGGAACTTCTGGCTCTCTTTACCAGCCCGGAGATCATTTCATCGGGTTGTATGGCCCTCGCGATCTGTGCGATAATATTC GTGCCGATTTTTGTAACCTATAAGGCCTGCTTCTACAAACGCAGCCTCCTCAACCTGCCCGCGCAGCCTTCGCAGCAAAC ACAGCAGGGCACGGTTGACGAGAAGGGGCGCTGGTATAAATATTCATAA
Upstream 100 bases:
>100_bases GAGGGAGCCGACACGGTAGTCGTGATCAAACCTGCCCACACGGCTGCTTTCTTCGATCTGCAGGTCAGGGAATTTGTCGC GATGCCACGGGACCGCTGAG
Downstream 100 bases:
>100_bases TCCTATTTTTATGCGCGTTTTCCAATCTATTTTCTCTTTATTGCATCCGGGTGAATGGTGCCATGCTAACACGTATCATG CAAATACCTCGCTCAAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MALKSLSEALGLLVKKPLVWMPGLFAAFSILFTYYIITLFGSVAALAAGIILLLVFPAFLAGTYGIVIGEKSSSADFRKY AVYGYFRCLIPNVVVLMIGFVLSNTLTYILLMLGISVDTAFYFSIFLIIPLVFFFYFADISAMVNNYAAFRAIKDSALRV TTGSISVTAFYLFNVAIFFAASFIFSAIWSLLAVDVLTPITQMTESEILAMSQEELLALFTSPEIISSGCMALAICAIIF VPIFVTYKACFYKRSLLNLPAQPSQQTQQGTVDEKGRWYKYS
Sequences:
>Translated_282_residues MALKSLSEALGLLVKKPLVWMPGLFAAFSILFTYYIITLFGSVAALAAGIILLLVFPAFLAGTYGIVIGEKSSSADFRKY AVYGYFRCLIPNVVVLMIGFVLSNTLTYILLMLGISVDTAFYFSIFLIIPLVFFFYFADISAMVNNYAAFRAIKDSALRV TTGSISVTAFYLFNVAIFFAASFIFSAIWSLLAVDVLTPITQMTESEILAMSQEELLALFTSPEIISSGCMALAICAIIF VPIFVTYKACFYKRSLLNLPAQPSQQTQQGTVDEKGRWYKYS >Mature_281_residues ALKSLSEALGLLVKKPLVWMPGLFAAFSILFTYYIITLFGSVAALAAGIILLLVFPAFLAGTYGIVIGEKSSSADFRKYA VYGYFRCLIPNVVVLMIGFVLSNTLTYILLMLGISVDTAFYFSIFLIIPLVFFFYFADISAMVNNYAAFRAIKDSALRVT TGSISVTAFYLFNVAIFFAASFIFSAIWSLLAVDVLTPITQMTESEILAMSQEELLALFTSPEIISSGCMALAICAIIFV PIFVTYKACFYKRSLLNLPAQPSQQTQQGTVDEKGRWYKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31147; Mature: 31016
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKSLSEALGLLVKKPLVWMPGLFAAFSILFTYYIITLFGSVAALAAGIILLLVFPAFL CCHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTYGIVIGEKSSSADFRKYAVYGYFRCLIPNVVVLMIGFVLSNTLTYILLMLGISVDTA HCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYFSIFLIIPLVFFFYFADISAMVNNYAAFRAIKDSALRVTTGSISVTAFYLFNVAIFFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH ASFIFSAIWSLLAVDVLTPITQMTESEILAMSQEELLALFTSPEIISSGCMALAICAIIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VPIFVTYKACFYKRSLLNLPAQPSQQTQQGTVDEKGRWYKYS HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEECCC >Mature Secondary Structure ALKSLSEALGLLVKKPLVWMPGLFAAFSILFTYYIITLFGSVAALAAGIILLLVFPAFL CHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTYGIVIGEKSSSADFRKYAVYGYFRCLIPNVVVLMIGFVLSNTLTYILLMLGISVDTA HCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FYFSIFLIIPLVFFFYFADISAMVNNYAAFRAIKDSALRVTTGSISVTAFYLFNVAIFFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHH ASFIFSAIWSLLAVDVLTPITQMTESEILAMSQEELLALFTSPEIISSGCMALAICAIIF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH VPIFVTYKACFYKRSLLNLPAQPSQQTQQGTVDEKGRWYKYS HHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA