Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
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Accession | NC_008942 |
Length | 1,804,962 |
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The map label for this gene is 124485531
Identifier: 124485531
GI number: 124485531
Start: 682418
End: 683005
Strand: Reverse
Name: 124485531
Synonym: Mlab_0708
Alternate gene names: NA
Gene position: 683005-682418 (Counterclockwise)
Preceding gene: 124485532
Following gene: 124485530
Centisome position: 37.84
GC content: 57.48
Gene sequence:
>588_bases ATGAAAATCGAGAAAACCATCACATACTTCAGCGAACCGGGAAAAGAAAATACCCGGGACTGCGCAGAGATCGCCGTACA GCGTGCCAAGGAACTCGGGCTTTCAACGATCGTTGTGGCAAGTACCGGAGGATACACGGCAAAAATATTTTTCGAGGCGA TGAAGGGGACGAACCTTCGTCTCGTGGTCGTGGCCCACGCGGTGGGATTTTCAAAACCAGGGGTCTGGGAGTTCGATCCC TCCCTTGCAGAGGAGCTTAGAGCTGCCGGCGTCGTGATCGTCTGCGGCACACATTCTCTTTCCGGTCTCGAGCGGGCGAT CTCGCGGAACCCGAAGCTCGGCGGCAGCAGCCGGACCGAGGCCATTGCTGAAGCTTTCAGGAGAACCGTCGCGATCGGAA TGAAGGTCGCCGTCGAGTGCGTGCTGATCGCTACAGATCAGGGAGTGATATCCGTATCCGACGAAGTCATGGCGGTTGGA GGGACCATCGAGGGAGCCGACACGGTAGTCGTGATCAAACCTGCCCACACGGCTGCTTTCTTCGATCTGCAGGTCAGGGA ATTTGTCGCGATGCCACGGGACCGCTGA
Upstream 100 bases:
>100_bases ATGACCTACTCCTGTCCGCGTGCAATCATCAGGGATGTGAAATGCACAGGTTATGTTCTGACCGATTTTACAGATTTTAC AATTAAACGGGAGTAGAGAC
Downstream 100 bases:
>100_bases GATGGCACTCAAATCGTTGTCGGAAGCGCTTGGCCTGCTCGTCAAAAAGCCGCTCGTCTGGATGCCGGGGCTTTTTGCCG CATTTTCCATCCTGTTTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MKIEKTITYFSEPGKENTRDCAEIAVQRAKELGLSTIVVASTGGYTAKIFFEAMKGTNLRLVVVAHAVGFSKPGVWEFDP SLAEELRAAGVVIVCGTHSLSGLERAISRNPKLGGSSRTEAIAEAFRRTVAIGMKVAVECVLIATDQGVISVSDEVMAVG GTIEGADTVVVIKPAHTAAFFDLQVREFVAMPRDR
Sequences:
>Translated_195_residues MKIEKTITYFSEPGKENTRDCAEIAVQRAKELGLSTIVVASTGGYTAKIFFEAMKGTNLRLVVVAHAVGFSKPGVWEFDP SLAEELRAAGVVIVCGTHSLSGLERAISRNPKLGGSSRTEAIAEAFRRTVAIGMKVAVECVLIATDQGVISVSDEVMAVG GTIEGADTVVVIKPAHTAAFFDLQVREFVAMPRDR >Mature_195_residues MKIEKTITYFSEPGKENTRDCAEIAVQRAKELGLSTIVVASTGGYTAKIFFEAMKGTNLRLVVVAHAVGFSKPGVWEFDP SLAEELRAAGVVIVCGTHSLSGLERAISRNPKLGGSSRTEAIAEAFRRTVAIGMKVAVECVLIATDQGVISVSDEVMAVG GTIEGADTVVVIKPAHTAAFFDLQVREFVAMPRDR
Specific function: Unknown
COG id: COG1751
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015074 - InterPro: IPR023161 - InterPro: IPR015795 - ProDom: PD022619 [H]
Pfam domain/function: PF02887 PK_C [H]
EC number: NA
Molecular weight: Translated: 20800; Mature: 20800
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIEKTITYFSEPGKENTRDCAEIAVQRAKELGLSTIVVASTGGYTAKIFFEAMKGTNLR CCCCCEEHEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEECCCCCEE LVVVAHAVGFSKPGVWEFDPSLAEELRAAGVVIVCGTHSLSGLERAISRNPKLGGSSRTE EEEEEEECCCCCCCCCEECHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHH AIAEAFRRTVAIGMKVAVECVLIATDQGVISVSDEVMAVGGTIEGADTVVVIKPAHTAAF HHHHHHHHHHHHHHHEEEEEEEEEECCCEEEECCCEEEECCEECCCCEEEEEECCCCEEE FDLQVREFVAMPRDR EHHHHHHHHCCCCCC >Mature Secondary Structure MKIEKTITYFSEPGKENTRDCAEIAVQRAKELGLSTIVVASTGGYTAKIFFEAMKGTNLR CCCCCEEHEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEEEECCCCCEE LVVVAHAVGFSKPGVWEFDPSLAEELRAAGVVIVCGTHSLSGLERAISRNPKLGGSSRTE EEEEEEECCCCCCCCCEECHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCCCCHHHH AIAEAFRRTVAIGMKVAVECVLIATDQGVISVSDEVMAVGGTIEGADTVVVIKPAHTAAF HHHHHHHHHHHHHHHEEEEEEEEEECCCEEEECCCEEEECCEECCCCEEEEEECCCCEEE FDLQVREFVAMPRDR EHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]