| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485526
Identifier: 124485526
GI number: 124485526
Start: 676306
End: 676737
Strand: Reverse
Name: 124485526
Synonym: Mlab_0703
Alternate gene names: NA
Gene position: 676737-676306 (Counterclockwise)
Preceding gene: 124485527
Following gene: 124485525
Centisome position: 37.49
GC content: 46.3
Gene sequence:
>432_bases ATGGCGCTAAAATATAAGAAACAGAGTCAAAAAGAGAAACGCCTGGTGATGGCAAGCGTTTTAGCTATTGTTTCAATCAT AATCGTAGCGGCCTGTGCCAGTGTCGCACTTCTTGGAACCGGATACGTCATCGATAAATCACTTGAAGACCCGGACGTAC TTCTGCATGTGTTTGTGGTCGGCAATGATGTGATCGTTACGATCTATGAAGGACGCAGAGTTGATGAACTTACCATGGTC TCTCTTGAGATCGAAGGAGTTTCGCTGCCGCAATCAGTCAGCCTAAAACCAGCACCAAATTCAGGGACCGGAGAAATCTA CTTTACGGAGGCATGCGCCGGCGTAACAGGTGTAAGGGATATTGCCGTTCGCGGTGTATTTTCAGACGGAAAAACGCAGC TCCTAAAGCTGACTACCATAAAATTCACATAA
Upstream 100 bases:
>100_bases TTGGGACGCAGATCTGAAAAAAGAGGTGTATGTACTCATTTATGTGGAACCCGCCGATGAAGAGACCTACTACGGCAGTA TGATGCGTTTGGAGTGAACA
Downstream 100 bases:
>100_bases ATCAATCCTTTTTTTCTAAAGTAAGTGATTACACTCTCTTCGATAATAGTATGAGTGCCCTTAGACGCAAAAATTTCCAC ATTTTTTATTACCTCAGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MALKYKKQSQKEKRLVMASVLAIVSIIIVAACASVALLGTGYVIDKSLEDPDVLLHVFVVGNDVIVTIYEGRRVDELTMV SLEIEGVSLPQSVSLKPAPNSGTGEIYFTEACAGVTGVRDIAVRGVFSDGKTQLLKLTTIKFT
Sequences:
>Translated_143_residues MALKYKKQSQKEKRLVMASVLAIVSIIIVAACASVALLGTGYVIDKSLEDPDVLLHVFVVGNDVIVTIYEGRRVDELTMV SLEIEGVSLPQSVSLKPAPNSGTGEIYFTEACAGVTGVRDIAVRGVFSDGKTQLLKLTTIKFT >Mature_142_residues ALKYKKQSQKEKRLVMASVLAIVSIIIVAACASVALLGTGYVIDKSLEDPDVLLHVFVVGNDVIVTIYEGRRVDELTMVS LEIEGVSLPQSVSLKPAPNSGTGEIYFTEACAGVTGVRDIAVRGVFSDGKTQLLKLTTIKFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15330; Mature: 15199
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKYKKQSQKEKRLVMASVLAIVSIIIVAACASVALLGTGYVIDKSLEDPDVLLHVFVV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEE GNDVIVTIYEGRRVDELTMVSLEIEGVSLPQSVSLKPAPNSGTGEIYFTEACAGVTGVRD CCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCHH IAVRGVFSDGKTQLLKLTTIKFT EEEEEECCCCCEEEEEEEEEEEC >Mature Secondary Structure ALKYKKQSQKEKRLVMASVLAIVSIIIVAACASVALLGTGYVIDKSLEDPDVLLHVFVV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEE GNDVIVTIYEGRRVDELTMVSLEIEGVSLPQSVSLKPAPNSGTGEIYFTEACAGVTGVRD CCCEEEEEECCCCCCEEEEEEEEECCCCCCCCCEECCCCCCCCCEEEEECCCCCCCCCHH IAVRGVFSDGKTQLLKLTTIKFT EEEEEECCCCCEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA