| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
Click here to switch to the map view.
The map label for this gene is 124485525
Identifier: 124485525
GI number: 124485525
Start: 674431
End: 676125
Strand: Reverse
Name: 124485525
Synonym: Mlab_0702
Alternate gene names: NA
Gene position: 676125-674431 (Counterclockwise)
Preceding gene: 124485526
Following gene: 124485524
Centisome position: 37.46
GC content: 48.14
Gene sequence:
>1695_bases ATGCTACGACATGCTTTTTCGAAGATCCTCTTTATCCTAGTCGTTCTTCTTTTCATATCCGCATCCGGCTGCATTCAAGA GAAACAGGAAACCCCGGAACTTCAACCAGTCTCAGATGAATATTATGCCAAGATGGATACGGTTCTGTATCCTTACATGC AGACCGTCGATGAGCAGATGCAGGAAATTACTGCATTGGTTTGGGAGACGGCACGGGAACTCGACGGCGTGCCGATGGAC GATCCTGCGGTCGATCTGGCATTACTGAAACTGAAAAGCGAGATACCGCTGTCCTTTGATTCCGGACGCCTCGACAAAGA CAACGTCTTACGGGCCGTTACCAATGAACAGTATATCGAGTGGTCTGTCGGGACATATATCGGAGAAAACCAATACACCG AAGAAGAACTCAAAGCTGCAGGTGAGAATTGTACGATATCCCCGTTCACCCTCTTTGATAACGGCGAGCAGGGGGTTATG GTCATCGCACCGGTCTACGATGCAAACGGGAATTTTGACGGTACCCTTCAGGTAGCTCTGGATGTAGGGTATCTCTTCTC CGGACCTGCAGAGGAACTGAGAACGAAATACGGGTATACCGTCTGGGCCGTTCAGGACGACGGAATCGTGATTTATGACG AGGACACGCAGGAGATAGGAGTAAACCTCACGAAACCCACATCGGCATATACCCCTTCATTGAACTCGGCGATCGCAGAT ATCCTCGCAAACGAATCAGGACAGACATCCTACATATTCTATACGCTAGACTGGCATGATATCAATCAGACGAATGCCGT ATGGAGTACTCTCGACCCAGGATACGGACAGAACTGGCGGGTCGTGCTTATCGACAACGTCCCGATGCCGCGTATGACGA GCGAACTCACGGTTACCCAGGACGAACTGAAAGCCTTCGTCACCAATGCCTATGTCTATGCACGGACACATGAAAAAACC GAGGCCTTGGCGGCGTTCAATGATCCAAAAGGAGAGTTTATCGATGGAGAACTGTACATATTCGCCGAAACTCTGAATGG GACAATGCTTTCACTTCCATATCAGCCGGCTCTTATCGGAACGGATCAATGGATGGCAGAAGATACAACTGGGGTTAAAT ACATTCAAAGACAGATCGCACGCGCAGAACAGGGCGGCGGATATGTCATGTACCTCTATCCAAATCCGACACAGGATTTC GCAACCGAATTAAAATTGGCCTATGTGATGCCGATAGATAACGAGTGGTTCATCGGTGCGGGAATATATGAACACAACAC CTTGCTTGCCCACTCGACCAGTGTTGACTGGCAGAAGCGAAACGAACTTATCAAGCAGGTTCGAACCATGCAGTATCTTG CAGAAGTCGAGGGGGTCTCTGCAGTTACTGACATGATGATGGATCCAAACAGTGATATCCAGGTCGAAGGATTATACCCG ATGGCGATCACCGAAAACGGGACCGTACTGGCATTTGCAAGAAATCCGGACATTGTAGGTACGAATCAGCTTGGGAGAGT AAATTCATTAGACATATCACTCATACGGGAAGGCATATCACTTGGGAAAGAGGGAGGAGGACTGATGTATACTCTTCTCT GGGATTCCACACTAAACAAAGAGATTTTTATACTGGTATATGTGGTTCCGGCAGATGACGATGCCTACTTTGCAAGTTTT ATGATTCTTGAATGA
Upstream 100 bases:
>100_bases ATTTTTTATTACCTCAGCTCCGCTGATCCTCCCAAATAATACCCCACAACAAAAGCTATAAGAACTTTCCCCCTACAATT GTTCACTAAGGAGTCTGATT
Downstream 100 bases:
>100_bases GGAATACAAGAGAAAATAACCTAATTTTTTTATCTCTCGAAACATTTCCAAGAAAAATCAGAGAGATAGTCCCACGATAA AAAGATATAAGAACTTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cache Type 2 Domain-Containing Protein; Signal Transduction Histidine Kinase-Like
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MLRHAFSKILFILVVLLFISASGCIQEKQETPELQPVSDEYYAKMDTVLYPYMQTVDEQMQEITALVWETARELDGVPMD DPAVDLALLKLKSEIPLSFDSGRLDKDNVLRAVTNEQYIEWSVGTYIGENQYTEEELKAAGENCTISPFTLFDNGEQGVM VIAPVYDANGNFDGTLQVALDVGYLFSGPAEELRTKYGYTVWAVQDDGIVIYDEDTQEIGVNLTKPTSAYTPSLNSAIAD ILANESGQTSYIFYTLDWHDINQTNAVWSTLDPGYGQNWRVVLIDNVPMPRMTSELTVTQDELKAFVTNAYVYARTHEKT EALAAFNDPKGEFIDGELYIFAETLNGTMLSLPYQPALIGTDQWMAEDTTGVKYIQRQIARAEQGGGYVMYLYPNPTQDF ATELKLAYVMPIDNEWFIGAGIYEHNTLLAHSTSVDWQKRNELIKQVRTMQYLAEVEGVSAVTDMMMDPNSDIQVEGLYP MAITENGTVLAFARNPDIVGTNQLGRVNSLDISLIREGISLGKEGGGLMYTLLWDSTLNKEIFILVYVVPADDDAYFASF MILE
Sequences:
>Translated_564_residues MLRHAFSKILFILVVLLFISASGCIQEKQETPELQPVSDEYYAKMDTVLYPYMQTVDEQMQEITALVWETARELDGVPMD DPAVDLALLKLKSEIPLSFDSGRLDKDNVLRAVTNEQYIEWSVGTYIGENQYTEEELKAAGENCTISPFTLFDNGEQGVM VIAPVYDANGNFDGTLQVALDVGYLFSGPAEELRTKYGYTVWAVQDDGIVIYDEDTQEIGVNLTKPTSAYTPSLNSAIAD ILANESGQTSYIFYTLDWHDINQTNAVWSTLDPGYGQNWRVVLIDNVPMPRMTSELTVTQDELKAFVTNAYVYARTHEKT EALAAFNDPKGEFIDGELYIFAETLNGTMLSLPYQPALIGTDQWMAEDTTGVKYIQRQIARAEQGGGYVMYLYPNPTQDF ATELKLAYVMPIDNEWFIGAGIYEHNTLLAHSTSVDWQKRNELIKQVRTMQYLAEVEGVSAVTDMMMDPNSDIQVEGLYP MAITENGTVLAFARNPDIVGTNQLGRVNSLDISLIREGISLGKEGGGLMYTLLWDSTLNKEIFILVYVVPADDDAYFASF MILE >Mature_564_residues MLRHAFSKILFILVVLLFISASGCIQEKQETPELQPVSDEYYAKMDTVLYPYMQTVDEQMQEITALVWETARELDGVPMD DPAVDLALLKLKSEIPLSFDSGRLDKDNVLRAVTNEQYIEWSVGTYIGENQYTEEELKAAGENCTISPFTLFDNGEQGVM VIAPVYDANGNFDGTLQVALDVGYLFSGPAEELRTKYGYTVWAVQDDGIVIYDEDTQEIGVNLTKPTSAYTPSLNSAIAD ILANESGQTSYIFYTLDWHDINQTNAVWSTLDPGYGQNWRVVLIDNVPMPRMTSELTVTQDELKAFVTNAYVYARTHEKT EALAAFNDPKGEFIDGELYIFAETLNGTMLSLPYQPALIGTDQWMAEDTTGVKYIQRQIARAEQGGGYVMYLYPNPTQDF ATELKLAYVMPIDNEWFIGAGIYEHNTLLAHSTSVDWQKRNELIKQVRTMQYLAEVEGVSAVTDMMMDPNSDIQVEGLYP MAITENGTVLAFARNPDIVGTNQLGRVNSLDISLIREGISLGKEGGGLMYTLLWDSTLNKEIFILVYVVPADDDAYFASF MILE
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63181; Mature: 63181
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRHAFSKILFILVVLLFISASGCIQEKQETPELQPVSDEYYAKMDTVLYPYMQTVDEQM CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QEITALVWETARELDGVPMDDPAVDLALLKLKSEIPLSFDSGRLDKDNVLRAVTNEQYIE HHHHHHHHHHHHHHCCCCCCCCHHHHEEEEECCCCCEECCCCCCCHHHHHHHHCCCCEEE WSVGTYIGENQYTEEELKAAGENCTISPFTLFDNGEQGVMVIAPVYDANGNFDGTLQVAL EECCEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEE DVGYLFSGPAEELRTKYGYTVWAVQDDGIVIYDEDTQEIGVNLTKPTSAYTPSLNSAIAD EECCCCCCCHHHHHHHCCEEEEEEECCCEEEECCCCHHHCCEEECCCCCCCCCHHHHHHH ILANESGQTSYIFYTLDWHDINQTNAVWSTLDPGYGQNWRVVLIDNVPMPRMTSELTVTQ HHCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEH DELKAFVTNAYVYARTHEKTEALAAFNDPKGEFIDGELYIFAETLNGTMLSLPYQPALIG HHHHHHHHCEEEEEECCCHHHHHHCCCCCCCCEECCEEEEEEEECCCEEEECCCCCEEEC TDQWMAEDTTGVKYIQRQIARAEQGGGYVMYLYPNPTQDFATELKLAYVMPIDNEWFIGA CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCEEEEEEEECCCCEEEEE GIYEHNTLLAHSTSVDWQKRNELIKQVRTMQYLAEVEGVSAVTDMMMDPNSDIQVEGLYP CEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEE MAITENGTVLAFARNPDIVGTNQLGRVNSLDISLIREGISLGKEGGGLMYTLLWDSTLNK EEEECCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCC EIFILVYVVPADDDAYFASFMILE EEEEEEEEEECCCCCEEEEEEEEC >Mature Secondary Structure MLRHAFSKILFILVVLLFISASGCIQEKQETPELQPVSDEYYAKMDTVLYPYMQTVDEQM CCHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH QEITALVWETARELDGVPMDDPAVDLALLKLKSEIPLSFDSGRLDKDNVLRAVTNEQYIE HHHHHHHHHHHHHHCCCCCCCCHHHHEEEEECCCCCEECCCCCCCHHHHHHHHCCCCEEE WSVGTYIGENQYTEEELKAAGENCTISPFTLFDNGEQGVMVIAPVYDANGNFDGTLQVAL EECCEEECCCCCCHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCCEEEEEE DVGYLFSGPAEELRTKYGYTVWAVQDDGIVIYDEDTQEIGVNLTKPTSAYTPSLNSAIAD EECCCCCCCHHHHHHHCCEEEEEEECCCEEEECCCCHHHCCEEECCCCCCCCCHHHHHHH ILANESGQTSYIFYTLDWHDINQTNAVWSTLDPGYGQNWRVVLIDNVPMPRMTSELTVTQ HHCCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEEH DELKAFVTNAYVYARTHEKTEALAAFNDPKGEFIDGELYIFAETLNGTMLSLPYQPALIG HHHHHHHHCEEEEEECCCHHHHHHCCCCCCCCEECCEEEEEEEECCCEEEECCCCCEEEC TDQWMAEDTTGVKYIQRQIARAEQGGGYVMYLYPNPTQDFATELKLAYVMPIDNEWFIGA CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCEEEEEEEECCCCEEEEE GIYEHNTLLAHSTSVDWQKRNELIKQVRTMQYLAEVEGVSAVTDMMMDPNSDIQVEGLYP CEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEEE MAITENGTVLAFARNPDIVGTNQLGRVNSLDISLIREGISLGKEGGGLMYTLLWDSTLNK EEEECCCEEEEEECCCCEECCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCC EIFILVYVVPADDDAYFASFMILE EEEEEEEEEECCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA