Definition Methanocorpusculum labreanum Z chromosome, complete genome.
Accession NC_008942
Length 1,804,962

Click here to switch to the map view.

The map label for this gene is 124485527

Identifier: 124485527

GI number: 124485527

Start: 676741

End: 678402

Strand: Reverse

Name: 124485527

Synonym: Mlab_0704

Alternate gene names: NA

Gene position: 678402-676741 (Counterclockwise)

Preceding gene: 124485529

Following gene: 124485526

Centisome position: 37.59

GC content: 48.01

Gene sequence:

>1662_bases
ATGAAGCGGCAAACAATACATTTTATCATAATATGTCTGATCCTGGCACTAATTCTCGCCACCGGGTGTATTACAACCCG
ACAGCTGGAACCGGTCTCCACTGCAAAATTGGCCGATATGCAGAGTTCATTGGACGAGTTTATCCCGACAATCGAAGAAC
AACTCAACGAAATATTCATCCTTACAAACAGCACTGCAGGTAATCTTACGGGAACCACACCAGACAGCCAAACGTTGAAC
CAGGCCTTATTACAGCTTCGCCGCGACATCCCTGCCGCATATGACGTATATGTCGTCAGTGCAGACAACACCTTTCTTGC
GGTGATCAGCAAACAGGATAAACAGAATCTTATCGGGAAACAAGCTGGAATCTCGACCAGCGATGCGGATTTCACCAATA
CGACGAATGGCTGCATTATCACAAAACCCATCACATTTATCACCGGAGAAAGAGGTGTTCTCATCATTGCCCCGATCTAT
GACGAAAACGGCACATACATAGCGTCGCTTCGCGTCTCGCTGAACCCAGTCTACCTTTTTTCCGGACCGGTGAACGAACT
CAAAATGCAGGAAGGATACACCGTCTGGTCGATCCAGCCGGACGGCGTACAAATCTATGATGAAGATATCGAAGAACTCG
ACAAAAACGTATTGACCGACCCGTTGTACAGTGAACCGACCATCAGCAGTGCGATGCACCTTATAGCTGAAGAAAAACAG
GGGAACGTATCATATATGTTTCAAAATGTCGGATGGACCGATTACGTACAGGCAAACGCCGTGTGGAATACGATCGATCT
GCCAAACGGCATTGAATGGAGAGTTGTTCTTAGTGACAATTCCAACTTCGATCCGAATCAAAACAGAAGGCCTACCGTCG
ATGATCTGAAAGCATTTGTTGAAAAAGCATACATTTACACCCAGACTCACACCAAAGAAGAGGCACTCCGTGTGTTCAAT
GACCCGAATGGGGAGTTCATTGACGGTGAACTCTACATCTTTGCCTACGATATGAACGGAACGACACTTGCTCTGCCGTA
TCAGCAGAGCCTTGTCGGAACAAACCGATGGTACGGAGAAGATATCGTCGGAGTGAGACCTCTCCAGCGTTTTATCGACA
AAGCGAAATTCGGAGGAGGGTTCGTGTATTATCAGTATCCAAACCCGAGCGACAAGTTTCTGCCTGAGTTGAAGTTGTCA
TATGTCATGTCCGTCGATGAAGACTGGCTGATTGGAGCTGGAATCTATCCGGGAACCATGTCCCTCAACTACAGCTGGGA
AGACCGAAATCAGCTGATCTCCCAAGTCAGGGGACTCCAGTATCTTTCCACCACCCTCCAAAAAGAGGAGTTGCTGCAGA
TGATCAATGATCCAAACAGTACGATCCAGGTCGATGGGCTGTATCCTTTTGCTCTGGATCCAGAGGGAACCGTCCTTGGC
AATGCACACAACCCGTCGATGACGGGAAAGAACCGGCTTGGGTACACAAATTCCTATGACATGTCCCCGGTACGGGAGAT
CATCTCTCTGGCAGAATCAGGAGGGGGGTTGATGTACAGCCTTGTTTGGGACGCAGATCTGAAAAAAGAGGTGTATGTAC
TCATTTATGTGGAACCCGCCGATGAAGAGACCTACTACGGCAGTATGATGCGTTTGGAGTGA

Upstream 100 bases:

>100_bases
ATGCTCCTAAAAAAATGGACAAAAACTACATGAGAATAAACAAGATATAATATACCGGAAGGCGTAAAAAAGTAAATATA
TAGTTCTGGATCATGACACA

Downstream 100 bases:

>100_bases
ACAATGGCGCTAAAATATAAGAAACAGAGTCAAAAAGAGAAACGCCTGGTGATGGCAAGCGTTTTAGCTATTGTTTCAAT
CATAATCGTAGCGGCCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cache Type 2 Domain-Containing Protein; Signal Transduction Histidine Kinase-Like; Multi-Sensor Hybrid Histidine Kinase

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN
QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY
DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ
GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN
DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS
YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG
NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE

Sequences:

>Translated_553_residues
MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN
QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY
DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ
GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN
DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS
YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG
NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE
>Mature_553_residues
MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN
QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY
DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ
GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN
DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS
YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG
NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE

Specific function: Unknown

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62148; Mature: 62148

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LTNSTAGNLTGTTPDSQTLNQALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGK
EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCHHHHHHHH
QAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIYDENGTYIASLRVSLNPVYLF
HCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEEEEECEEEEE
SGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ
CCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFV
CCEEEEEECCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH
EKAYIYTQTHTKEEALRVFNDPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGE
HHHEEEEECCCHHHHHHHHCCCCCCEECCEEEEEEEECCCCEEEECCHHHHCCCCCCCCC
DIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLSYVMSVDEDWLIGAGIYPGTM
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHEEEEEEECCCCEEEECCCCCCEE
SLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEE
NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECC
DEETYYGSMMRLE
CCCCCCCCEEEEC
>Mature Secondary Structure
MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE
LTNSTAGNLTGTTPDSQTLNQALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGK
EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCHHHHHHHH
QAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIYDENGTYIASLRVSLNPVYLF
HCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEEEEECEEEEE
SGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ
CCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFV
CCEEEEEECCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH
EKAYIYTQTHTKEEALRVFNDPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGE
HHHEEEEECCCHHHHHHHHCCCCCCEECCEEEEEEEECCCCEEEECCHHHHCCCCCCCCC
DIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLSYVMSVDEDWLIGAGIYPGTM
CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHEEEEEEECCCCEEEECCCCCCEE
SLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEE
NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPA
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECC
DEETYYGSMMRLE
CCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA