| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485527
Identifier: 124485527
GI number: 124485527
Start: 676741
End: 678402
Strand: Reverse
Name: 124485527
Synonym: Mlab_0704
Alternate gene names: NA
Gene position: 678402-676741 (Counterclockwise)
Preceding gene: 124485529
Following gene: 124485526
Centisome position: 37.59
GC content: 48.01
Gene sequence:
>1662_bases ATGAAGCGGCAAACAATACATTTTATCATAATATGTCTGATCCTGGCACTAATTCTCGCCACCGGGTGTATTACAACCCG ACAGCTGGAACCGGTCTCCACTGCAAAATTGGCCGATATGCAGAGTTCATTGGACGAGTTTATCCCGACAATCGAAGAAC AACTCAACGAAATATTCATCCTTACAAACAGCACTGCAGGTAATCTTACGGGAACCACACCAGACAGCCAAACGTTGAAC CAGGCCTTATTACAGCTTCGCCGCGACATCCCTGCCGCATATGACGTATATGTCGTCAGTGCAGACAACACCTTTCTTGC GGTGATCAGCAAACAGGATAAACAGAATCTTATCGGGAAACAAGCTGGAATCTCGACCAGCGATGCGGATTTCACCAATA CGACGAATGGCTGCATTATCACAAAACCCATCACATTTATCACCGGAGAAAGAGGTGTTCTCATCATTGCCCCGATCTAT GACGAAAACGGCACATACATAGCGTCGCTTCGCGTCTCGCTGAACCCAGTCTACCTTTTTTCCGGACCGGTGAACGAACT CAAAATGCAGGAAGGATACACCGTCTGGTCGATCCAGCCGGACGGCGTACAAATCTATGATGAAGATATCGAAGAACTCG ACAAAAACGTATTGACCGACCCGTTGTACAGTGAACCGACCATCAGCAGTGCGATGCACCTTATAGCTGAAGAAAAACAG GGGAACGTATCATATATGTTTCAAAATGTCGGATGGACCGATTACGTACAGGCAAACGCCGTGTGGAATACGATCGATCT GCCAAACGGCATTGAATGGAGAGTTGTTCTTAGTGACAATTCCAACTTCGATCCGAATCAAAACAGAAGGCCTACCGTCG ATGATCTGAAAGCATTTGTTGAAAAAGCATACATTTACACCCAGACTCACACCAAAGAAGAGGCACTCCGTGTGTTCAAT GACCCGAATGGGGAGTTCATTGACGGTGAACTCTACATCTTTGCCTACGATATGAACGGAACGACACTTGCTCTGCCGTA TCAGCAGAGCCTTGTCGGAACAAACCGATGGTACGGAGAAGATATCGTCGGAGTGAGACCTCTCCAGCGTTTTATCGACA AAGCGAAATTCGGAGGAGGGTTCGTGTATTATCAGTATCCAAACCCGAGCGACAAGTTTCTGCCTGAGTTGAAGTTGTCA TATGTCATGTCCGTCGATGAAGACTGGCTGATTGGAGCTGGAATCTATCCGGGAACCATGTCCCTCAACTACAGCTGGGA AGACCGAAATCAGCTGATCTCCCAAGTCAGGGGACTCCAGTATCTTTCCACCACCCTCCAAAAAGAGGAGTTGCTGCAGA TGATCAATGATCCAAACAGTACGATCCAGGTCGATGGGCTGTATCCTTTTGCTCTGGATCCAGAGGGAACCGTCCTTGGC AATGCACACAACCCGTCGATGACGGGAAAGAACCGGCTTGGGTACACAAATTCCTATGACATGTCCCCGGTACGGGAGAT CATCTCTCTGGCAGAATCAGGAGGGGGGTTGATGTACAGCCTTGTTTGGGACGCAGATCTGAAAAAAGAGGTGTATGTAC TCATTTATGTGGAACCCGCCGATGAAGAGACCTACTACGGCAGTATGATGCGTTTGGAGTGA
Upstream 100 bases:
>100_bases ATGCTCCTAAAAAAATGGACAAAAACTACATGAGAATAAACAAGATATAATATACCGGAAGGCGTAAAAAAGTAAATATA TAGTTCTGGATCATGACACA
Downstream 100 bases:
>100_bases ACAATGGCGCTAAAATATAAGAAACAGAGTCAAAAAGAGAAACGCCTGGTGATGGCAAGCGTTTTAGCTATTGTTTCAAT CATAATCGTAGCGGCCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cache Type 2 Domain-Containing Protein; Signal Transduction Histidine Kinase-Like; Multi-Sensor Hybrid Histidine Kinase
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE
Sequences:
>Translated_553_residues MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE >Mature_553_residues MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFILTNSTAGNLTGTTPDSQTLN QALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGKQAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIY DENGTYIASLRVSLNPVYLFSGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFVEKAYIYTQTHTKEEALRVFN DPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGEDIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLS YVMSVDEDWLIGAGIYPGTMSLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPADEETYYGSMMRLE
Specific function: Unknown
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62148; Mature: 62148
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE LTNSTAGNLTGTTPDSQTLNQALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGK EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCHHHHHHHH QAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIYDENGTYIASLRVSLNPVYLF HCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEEEEECEEEEE SGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ CCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFV CCEEEEEECCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH EKAYIYTQTHTKEEALRVFNDPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGE HHHEEEEECCCHHHHHHHHCCCCCCEECCEEEEEEEECCCCEEEECCHHHHCCCCCCCCC DIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLSYVMSVDEDWLIGAGIYPGTM CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHEEEEEEECCCCEEEECCCCCCEE SLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEE NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECC DEETYYGSMMRLE CCCCCCCCEEEEC >Mature Secondary Structure MKRQTIHFIIICLILALILATGCITTRQLEPVSTAKLADMQSSLDEFIPTIEEQLNEIFI CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEE LTNSTAGNLTGTTPDSQTLNQALLQLRRDIPAAYDVYVVSADNTFLAVISKQDKQNLIGK EECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCHHHHHHHH QAGISTSDADFTNTTNGCIITKPITFITGERGVLIIAPIYDENGTYIASLRVSLNPVYLF HCCCCCCCCCCCCCCCCEEEECCEEEEECCCCEEEEEEEECCCCCEEEEEEEEECEEEEE SGPVNELKMQEGYTVWSIQPDGVQIYDEDIEELDKNVLTDPLYSEPTISSAMHLIAEEKQ CCCHHHHHHCCCCEEEEECCCCCEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC GNVSYMFQNVGWTDYVQANAVWNTIDLPNGIEWRVVLSDNSNFDPNQNRRPTVDDLKAFV CCEEEEEECCCCCCEEECCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHH EKAYIYTQTHTKEEALRVFNDPNGEFIDGELYIFAYDMNGTTLALPYQQSLVGTNRWYGE HHHEEEEECCCHHHHHHHHCCCCCCEECCEEEEEEEECCCCEEEECCHHHHCCCCCCCCC DIVGVRPLQRFIDKAKFGGGFVYYQYPNPSDKFLPELKLSYVMSVDEDWLIGAGIYPGTM CCCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHCHHHEEEEEEECCCCEEEECCCCCCEE SLNYSWEDRNQLISQVRGLQYLSTTLQKEELLQMINDPNSTIQVDGLYPFALDPEGTVLG EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCCCCEEE NAHNPSMTGKNRLGYTNSYDMSPVREIISLAESGGGLMYSLVWDADLKKEVYVLIYVEPA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEEEEEECC DEETYYGSMMRLE CCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA