| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485452
Identifier: 124485452
GI number: 124485452
Start: 604231
End: 604392
Strand: Reverse
Name: 124485452
Synonym: Mlab_0627
Alternate gene names: NA
Gene position: 604392-604231 (Counterclockwise)
Preceding gene: 124485453
Following gene: 124485451
Centisome position: 33.49
GC content: 53.09
Gene sequence:
>162_bases ATGGCAACTATAAAATGTACATCATGCAATGCCCCGCTCGCAGAGCGCGGTGCCACCGAGTTTAAATGCCCGGACTGTGG AGAGATAATTTACCGCTGCGCACGCTGCAGAAAACAGAGTGTCAAATACACCTGCCCGAAGTGCGGATTCCAGGGGCTCT GA
Upstream 100 bases:
>100_bases CTGAGATCATCAACGGACGGGCTTTCGGCAGTGTGAGGAGATACTTTGAAGCCACACGTTTATAATAAACGGACGCTAAT TAACTAAGGAGTTTGATCGT
Downstream 100 bases:
>100_bases ATAGTCATGGGTGAAGTCGTTGTTATTCTGAAAATCATGCCGGAATCCCCGGACGTTGACCTTGAGAAACTGCAGGCAGA CATCAGAGCAAAAGTATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 53; Mature: 52
Protein sequence:
>53_residues MATIKCTSCNAPLAERGATEFKCPDCGEIIYRCARCRKQSVKYTCPKCGFQGL
Sequences:
>Translated_53_residues MATIKCTSCNAPLAERGATEFKCPDCGEIIYRCARCRKQSVKYTCPKCGFQGL >Mature_52_residues ATIKCTSCNAPLAERGATEFKCPDCGEIIYRCARCRKQSVKYTCPKCGFQGL
Specific function: Unknown
COG id: COG2888
COG function: function code J; Predicted Zn-ribbon RNA-binding protein with a function in translation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5852; Mature: 5721
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
15.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 17.0 %Cys+Met (Translated Protein) 15.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 15.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIKCTSCNAPLAERGATEFKCPDCGEIIYRCARCRKQSVKYTCPKCGFQGL CCEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ATIKCTSCNAPLAERGATEFKCPDCGEIIYRCARCRKQSVKYTCPKCGFQGL CEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA