| Definition | Methanocorpusculum labreanum Z chromosome, complete genome. |
|---|---|
| Accession | NC_008942 |
| Length | 1,804,962 |
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The map label for this gene is 124485453
Identifier: 124485453
GI number: 124485453
Start: 604428
End: 604940
Strand: Reverse
Name: 124485453
Synonym: Mlab_0628
Alternate gene names: NA
Gene position: 604940-604428 (Counterclockwise)
Preceding gene: 124485455
Following gene: 124485452
Centisome position: 33.52
GC content: 53.8
Gene sequence:
>513_bases ATGACGGAGGTGACGGTGCTAAAAATCGGCGGGAGTCTGATGGATGCCGCAGAAAACATACTTGCCGAGATCCCGGCATC GCCGACATTAATCGTTCCCGGCGGCGGGGTCTTTGCAGATTTTGTCCGTGCCGAAAGGCTCGATGACGAGACCGCCCACT GGAAAGCGATCGAAGCGATGGAAAAATACGGCAGGTTTCTTTCCACATACGGCTATCCGGTCACGCACGAACTGAAAATC CCGGATGAACCGACCATCCTTCTTCCAAAATATATCCTGCAGAAAGAAGACCCGCTTCCCCACACATGGGACGTCACCTC CGACTCGATCGCGGCATGGGCGGCAGGCGTTCTCAAATGCCGGCTCTTGATCATAAAATCAACGGAATCCGGGGACGATC TCGTCGATCCCGAATTTGCATCCGTTCTTGCACAAAGCGGGGTCACGACTGAGATCATCAACGGACGGGCTTTCGGCAGT GTGAGGAGATACTTTGAAGCCACACGTTTATAA
Upstream 100 bases:
>100_bases CGAAAGCCGAGACAGGAGATACGCAGAGAGAAAGAAGCAAAAAGGTAACGAGCAGCCTTTTCATACTGGTTTTTCTTTAT TTACGTCATACTATTAGTGT
Downstream 100 bases:
>100_bases TAAACGGACGCTAATTAACTAAGGAGTTTGATCGTATGGCAACTATAAAATGTACATCATGCAATGCCCCGCTCGCAGAG CGCGGTGCCACCGAGTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: Amino Acid Kinase; 1-Pyrroline-5-Carboxylate Synthetase; Kinase Related Aspartokinase
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MTEVTVLKIGGSLMDAAENILAEIPASPTLIVPGGGVFADFVRAERLDDETAHWKAIEAMEKYGRFLSTYGYPVTHELKI PDEPTILLPKYILQKEDPLPHTWDVTSDSIAAWAAGVLKCRLLIIKSTESGDDLVDPEFASVLAQSGVTTEIINGRAFGS VRRYFEATRL
Sequences:
>Translated_170_residues MTEVTVLKIGGSLMDAAENILAEIPASPTLIVPGGGVFADFVRAERLDDETAHWKAIEAMEKYGRFLSTYGYPVTHELKI PDEPTILLPKYILQKEDPLPHTWDVTSDSIAAWAAGVLKCRLLIIKSTESGDDLVDPEFASVLAQSGVTTEIINGRAFGS VRRYFEATRL >Mature_169_residues TEVTVLKIGGSLMDAAENILAEIPASPTLIVPGGGVFADFVRAERLDDETAHWKAIEAMEKYGRFLSTYGYPVTHELKIP DEPTILLPKYILQKEDPLPHTWDVTSDSIAAWAAGVLKCRLLIIKSTESGDDLVDPEFASVLAQSGVTTEIINGRAFGSV RRYFEATRL
Specific function: Unknown
COG id: COG2054
COG function: function code R; Uncharacterized archaeal kinase related to aspartokinases, uridylate kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18650; Mature: 18519
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEVTVLKIGGSLMDAAENILAEIPASPTLIVPGGGVFADFVRAERLDDETAHWKAIEAM CCEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH EKYGRFLSTYGYPVTHELKIPDEPTILLPKYILQKEDPLPHTWDVTSDSIAAWAAGVLKC HHHHHHHHHCCCCCEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHE RLLIIKSTESGDDLVDPEFASVLAQSGVTTEIINGRAFGSVRRYFEATRL EEEEEECCCCCCCCCCHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure TEVTVLKIGGSLMDAAENILAEIPASPTLIVPGGGVFADFVRAERLDDETAHWKAIEAM CEEEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHH EKYGRFLSTYGYPVTHELKIPDEPTILLPKYILQKEDPLPHTWDVTSDSIAAWAAGVLKC HHHHHHHHHCCCCCEEEEECCCCCCEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHE RLLIIKSTESGDDLVDPEFASVLAQSGVTTEIINGRAFGSVRRYFEATRL EEEEEECCCCCCCCCCHHHHHHHHHCCCEEEHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA