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The map label for this gene is ef1b

Identifier: 124485451

GI number: 124485451

Start: 603964

End: 604224

Strand: Reverse

Name: ef1b

Synonym: Mlab_0626

Alternate gene names: 124485451

Gene position: 604224-603964 (Counterclockwise)

Preceding gene: 124485452

Following gene: 124485450

Centisome position: 33.48

GC content: 49.04

Gene sequence:

>261_bases
ATGGGTGAAGTCGTTGTTATTCTGAAAATCATGCCGGAATCCCCGGACGTTGACCTTGAGAAACTGCAGGCAGACATCAG
AGCAAAAGTATCCGGTATCGAGGATATGAAAGTCGAGCCGATCGGATTTGGTCTCTCTGCAATCAAGATCGCCATGATCA
CTGAAGATGACGAGGGAGCAGGCGATAAGATTGAAGGACTGTTTTCCCAGATCCCGGGCATCGACCGTACAGAGATCGAG
TCTCTGAACCGGTTACTCTAA

Upstream 100 bases:

>100_bases
CCCGGACTGTGGAGAGATAATTTACCGCTGCGCACGCTGCAGAAAACAGAGTGTCAAATACACCTGCCCGAAGTGCGGAT
TCCAGGGGCTCTGAATAGTC

Downstream 100 bases:

>100_bases
ATATCTTTTTTCTTTTCAGCCGGCGTGCTGTTTATCCTGTATCCAATCCAAGACAGCGCATGCTGGATATCCCGCTGTAG
AAAATTATTAACGACACCCA

Product: translation elongation factor 1B (aEF-1B)

Products: NA

Alternate protein names: EF-1-beta; aEF-1beta

Number of amino acids: Translated: 86; Mature: 85

Protein sequence:

>86_residues
MGEVVVILKIMPESPDVDLEKLQADIRAKVSGIEDMKVEPIGFGLSAIKIAMITEDDEGAGDKIEGLFSQIPGIDRTEIE
SLNRLL

Sequences:

>Translated_86_residues
MGEVVVILKIMPESPDVDLEKLQADIRAKVSGIEDMKVEPIGFGLSAIKIAMITEDDEGAGDKIEGLFSQIPGIDRTEIE
SLNRLL
>Mature_85_residues
GEVVVILKIMPESPDVDLEKLQADIRAKVSGIEDMKVEPIGFGLSAIKIAMITEDDEGAGDKIEGLFSQIPGIDRTEIES
LNRLL

Specific function: Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA

COG id: COG2092

COG function: function code J; Translation elongation factor EF-1beta

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-1-beta/EF-1-delta family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): EF1B_METLZ (A2SR44)

Other databases:

- EMBL:   CP000559
- RefSeq:   YP_001030067.1
- ProteinModelPortal:   A2SR44
- SMR:   A2SR44
- STRING:   A2SR44
- GeneID:   4795002
- GenomeReviews:   CP000559_GR
- KEGG:   mla:Mlab_0626
- eggNOG:   arNOG12647
- HOGENOM:   HBG541037
- OMA:   EIGFGIK
- BioCyc:   MLAB410358:MLAB_0626-MONOMER
- HAMAP:   MF_00043
- InterPro:   IPR014717
- InterPro:   IPR004542
- InterPro:   IPR014038
- Gene3D:   G3DSA:3.30.70.60
- SMART:   SM00888
- TIGRFAMs:   TIGR00489

Pfam domain/function: PF00736 EF1_GNE; SSF54984 Transl_elong_EF1B_B/D_G_exch

EC number: NA

Molecular weight: Translated: 9353; Mature: 9222

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEVVVILKIMPESPDVDLEKLQADIRAKVSGIEDMKVEPIGFGLSAIKIAMITEDDEGA
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCCC
GDKIEGLFSQIPGIDRTEIESLNRLL
CHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GEVVVILKIMPESPDVDLEKLQADIRAKVSGIEDMKVEPIGFGLSAIKIAMITEDDEGA
CCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCCCCC
GDKIEGLFSQIPGIDRTEIESLNRLL
CHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA