Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is nlpE [H]
Identifier: 124265603
GI number: 124265603
Start: 444146
End: 444724
Strand: Direct
Name: nlpE [H]
Synonym: Mpe_A0410
Alternate gene names: 124265603
Gene position: 444146-444724 (Clockwise)
Preceding gene: 124265601
Following gene: 124265604
Centisome position: 10.98
GC content: 75.13
Gene sequence:
>579_bases ATGGCGCTGGCGCATCGCGCGTCGGGACTGCGGCGGTGGCTCGCGCCGTGTCTGGCTTTCGTCCTGATGGGCGGAGCGCT CGCCAGCGCGTGGGCGCAACCGACCCTGCCGGTGCCCGCCACTTTCGCCGGCGTCCTGCCCTGTGCCGACTGCGCCGGCG TGGCGCAGACGCTCACGCTGCGTGCGGACGGCCTGTACCGCCTGCGCCGCACCTACCTGGGCAAGCCGGAAGGGCCGTTC TCCGAACTTGGACACTGGAAGCTGAACGCCGCCGGCACGCTGCTGATGCTGCGCGGCGAGACGGACACGCTGCTGTTCGC GGTGATGCCCTCGGGCGCCGAGGACGAGGGCGGGCTGCGCCTGCTCGACCGCCGCGGCCAGCCCATCGAGTCGGACGCCA ACCTGGCCCTGCGCCGCACGGCGGCGCTCGACCCGGTGGCGTTCACCGACTGCGACGGCGGCGTGCGAGAGCGCGTCGCC GACGATGGGCCGGGCAGCGCCGACGCCCCACCTGGCGTGGCCTGCGGGGCGCCGCAGGTGCCGGCGCACGATGCCCCGGA GCCTCAGCCCAGGCACTGA
Upstream 100 bases:
>100_bases GGTCGCGCCGTGACGGCCTGGAAATCGGCTACAAAGCGGTGGGAGCCAGTGGGGACTGGAGCGAGGGCGGTCGATGATTC GAACAGTTGGCGGCGGCGCC
Downstream 100 bases:
>100_bases CCACGCAACCGGAGGATCCCATGGACATCGACGCATTGCAGACCTTCCTCGGCACCACCGTGACTGCGGTGATCCTCAAG ATCCTGGCCGCGCTCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Copper homeostasis protein CutF [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MALAHRASGLRRWLAPCLAFVLMGGALASAWAQPTLPVPATFAGVLPCADCAGVAQTLTLRADGLYRLRRTYLGKPEGPF SELGHWKLNAAGTLLMLRGETDTLLFAVMPSGAEDEGGLRLLDRRGQPIESDANLALRRTAALDPVAFTDCDGGVRERVA DDGPGSADAPPGVACGAPQVPAHDAPEPQPRH
Sequences:
>Translated_192_residues MALAHRASGLRRWLAPCLAFVLMGGALASAWAQPTLPVPATFAGVLPCADCAGVAQTLTLRADGLYRLRRTYLGKPEGPF SELGHWKLNAAGTLLMLRGETDTLLFAVMPSGAEDEGGLRLLDRRGQPIESDANLALRRTAALDPVAFTDCDGGVRERVA DDGPGSADAPPGVACGAPQVPAHDAPEPQPRH >Mature_191_residues ALAHRASGLRRWLAPCLAFVLMGGALASAWAQPTLPVPATFAGVLPCADCAGVAQTLTLRADGLYRLRRTYLGKPEGPFS ELGHWKLNAAGTLLMLRGETDTLLFAVMPSGAEDEGGLRLLDRRGQPIESDANLALRRTAALDPVAFTDCDGGVRERVAD DGPGSADAPPGVACGAPQVPAHDAPEPQPRH
Specific function: Involved in copper homeostasis. Could be involved in both copper efflux and the delivery of copper to copper-dependent enzymes. When overproduced induces degP through the activation of the two-component system CpxA/CpxR [H]
COG id: COG3015
COG function: function code MP; Uncharacterized lipoprotein NlpE involved in copper resistance
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786390, Length=168, Percent_Identity=32.7380952380952, Blast_Score=70, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007298 [H]
Pfam domain/function: PF04170 NlpE [H]
EC number: NA
Molecular weight: Translated: 20111; Mature: 19980
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALAHRASGLRRWLAPCLAFVLMGGALASAWAQPTLPVPATFAGVLPCADCAGVAQTLTL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHH RADGLYRLRRTYLGKPEGPFSELGHWKLNAAGTLLMLRGETDTLLFAVMPSGAEDEGGLR CCCHHHHHHHHHCCCCCCCHHHCCCEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCEE LLDRRGQPIESDANLALRRTAALDPVAFTDCDGGVRERVADDGPGSADAPPGVACGAPQV EECCCCCCCCCCCCEEEHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC PAHDAPEPQPRH CCCCCCCCCCCC >Mature Secondary Structure ALAHRASGLRRWLAPCLAFVLMGGALASAWAQPTLPVPATFAGVLPCADCAGVAQTLTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHHHHH RADGLYRLRRTYLGKPEGPFSELGHWKLNAAGTLLMLRGETDTLLFAVMPSGAEDEGGLR CCCHHHHHHHHHCCCCCCCHHHCCCEEECCCCEEEEEECCCCEEEEEECCCCCCCCCCEE LLDRRGQPIESDANLALRRTAALDPVAFTDCDGGVRERVADDGPGSADAPPGVACGAPQV EECCCCCCCCCCCCEEEHHHHCCCCEEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC PAHDAPEPQPRH CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7635808; 7635807; 9278503 [H]