The gene/protein map for NC_008825 is currently unavailable.
Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265590

Identifier: 124265590

GI number: 124265590

Start: 431960

End: 434377

Strand: Direct

Name: 124265590

Synonym: Mpe_A0397

Alternate gene names: NA

Gene position: 431960-434377 (Clockwise)

Preceding gene: 124265588

Following gene: 124265591

Centisome position: 10.68

GC content: 65.51

Gene sequence:

>2418_bases
ATGGAAAAGATTGACCTGCGACGCAAGCTGGCGCGATTTGCACTGGGGAACCGGTGGGCGATCCTGGTGGTGATGGGGCT
GATCACGGCGTTCTTTGCGGTGGGCCTGGTGCGCGTGGACGTGAAGACCATCTTCTCGGACCTGTTCCCGAAGAACCACC
CCTTCGTGCAGGTCTACAAGGACCACCCCAACTTCGGCAATCCGCTGACCGTCACGCTGATGATCAAGCGTGTCGATGGC
AAGGACGTGTTCCAGGCCGACACGCTCGAGAAGATCTGGCGCATCTCGCGCGACATCGACCTCACGCCCGGGGTCGACCA
CGACCAGATCCTCTCCATCGCCACCTCCAAGGCGCGCTACACCGTCATCACCCCCGACGGCATCTTCTCGCAGCCCATCA
TGGACGACGAGCTGCCCAAGACGGCAGAGCAGCTCGCCGAGATCCGCCGCCGCGTCGACGAATCCCCCGGAGCCAACACC
TTCCTCGTGTCCTCCGACGGCACCGCCACCATCGTCAACGCCACCTTCATCGAACAATCCGTCGACTACGGCAAGGTCTT
CGACGCCGTCCAGGCCATCGTCAAGAACGAGACCGACGCTGCGCACGAGATCCACGCGGCCGGCTTCCCCGTCATGACCG
GGTGGATCTACGCCTTCGGCGACAACACCCTCGAGATCTTCGCGATCACCCTGATCCTGATGTTCGGCGTGCTCGCCTTC
CACATGCGCAACGTCGCCGGCATCCTCGTGCCCGTGCTCGTCAGCGCCGTCTCGGCCATCTGGGGCTTCGGCCTCGTCGG
CTGGCTCGGCCTGCCCGTCGAGCCCCTGCTCATGGTCGTGCCGCTGCTGCTCATCGCCCGCTGCTTCAGCCACTGCGTGC
AAGCCACCGAGCGCTACTTCGAACTCCTGCACGACGGCCACCCCAAGGACAAGGCCGCCGAACTCTCCCTCGTCTCCCTC
GTCTACCCCGGCACCCTGGGCATCTTCACCGACGTGTGCGGCCTGCTCCTCGTCGCCCTCGCGCCCATCCCGGCCATGGA
GCGCTTCGCCCTCTTCACCGGCCTGTGGGCGCTCAACCTCGTCCCCTGCAGCGTCTTCCTCACCCCCATCCTGCTCAGCC
TCATGCCGAGGCCGAACAACATCGAGCACCTGCTCGGCAACGACCAGCACAGCGGCCCCGTCCAGCGCGGCATCCAGGGC
ACGCTCGGCGGCTTCGCTGCCCTCTCCACCGGACGCAACGCCCGCTACACCGGCATCGTCTTCATCGTCCTCGGCATCGT
CGCCGTCTTCCTCATGCTGCGCGTGCAGGTCGGCAACCCCGTCGAAGGCACCAACCTGCTGCGCTACGACTCCAAGTTCA
ACCTCGCCGTGCGCGAGATCAACCAGCACTTCCCCGGCTCCATGACCATGGAAGTCGTGTTCGAAGGCAAGGGCAACGCC
CGCATCGTGCGCCAGAGCGACACCCTCACCACGATGCGCGACCTCCAGCACTGCCTGGAGAGCAGCCCCAACCCGCCCAC
GGCCACCCTGTCCTTCGCCGACCTCGCGCCCGAAGCCAACCGCGTCTTCAGCGGCGGCAACCCCAAGTGGTCGCCGCTCG
ACAACGACGATGCCTCCGCCTCGGCCGCCGTCACCGGCCTCATGGCCGGCACCAACGCCAAGGCCTTCCTGCACGTCACC
GACTTCGAACAGAAGAACGGCACCGTCTCGCTCTGGTACTCCAACAACAAGCAAGAGACGGTGGACACCGCGCTGGCCCA
GGCCCGTGCCTGCGTCGAGAAAGTCGGCCCCGAGCACCCCACCTTCACCATCCGGCTGGCCTCCGGGGCGATCGCGCTGC
AGCAATCCATCAACGACACCGTGGTGCGCTACGAAAGCCGCATCCTGCTGGCCTTGAACCTCGTCATCCTGATCGGCTGC
TCGCTCGCCTACCGCTCCATCGTCGCGGGCCTGCTGCTGCTCATCCCGGTGAACCTGGCCAACGCCATGCTCACCGCCTC
CATGTCGCTCGCCGGCGTCGGCCTGGACGTCAACTCGCTGCCCATCCTGGCCATCGGCATCGGGGTCGGCATCGACTACG
GCATCTACCTCATGACGCGCATCTGCGAGGAATACCAGGTGGCCAACAAGGACCTGGGCGTGGCGATCCGGGTGGCGCTC
AAGACCTGCGGCAAGGCCATCTTCTTCACCGCCTCGCTGATGACGATCGGGCTGGCGCCGTGGTACTTCCTGTCGGAGCT
CAAGTTCCTCTCCGACACCGGGCTGCTGCTGGTGATCCTGATGCTCATCAACATGGTGCTGGCGCTGGTGCTGCTGCCGC
TGCTGGTGTACCTGATCAAGCCCAAGTTCCTCGACAGCGACATGTCGGCCCTGTCCGAATCCCTGGAGAAGAAGCCTCAG
ACGGCGGTGCCTGCCTGA

Upstream 100 bases:

>100_bases
TGCCGCTGCGCGATGCAGCGGTCGCTGCGCGCGCTGGCCGCCCCGGGAGCGACGGCATGCGGTTACTCAACGAATGGATG
AACGGATGCCCAGGTGCCTG

Downstream 100 bases:

>100_bases
GCCCTGTGAGAGTGCGCCGCCCCCCGCTGGGTGGGGACTGCGAATTGTCGACAACGAAGTAGGAGACGACCATGCATATC
AGAAAGTACGACCACGACTA

Product: RND efflux transporter

Products: NA

Alternate protein names: RND Superfamily Exporter; Patched Family Protein; Exporter Of RND Superfamily Protein; Efflux Transporter Hydrophobe/Amphiphile Efflux-3 Family; Exporter Of RND Superfamily Protein-Like Protein; Transporter Protein; Polyketide Cyclase/Dehydrase; Histidine Kinase; Exporter Of RND Superfamily; RND Family Multidrug Efflux Transporter; RND Superfamily Transporter; Exporters Of RND Superfamily; MMPL Domain Protein; RND Family Transporter; RND Family Efflux Transporter

Number of amino acids: Translated: 805; Mature: 805

Protein sequence:

>805_residues
MEKIDLRRKLARFALGNRWAILVVMGLITAFFAVGLVRVDVKTIFSDLFPKNHPFVQVYKDHPNFGNPLTVTLMIKRVDG
KDVFQADTLEKIWRISRDIDLTPGVDHDQILSIATSKARYTVITPDGIFSQPIMDDELPKTAEQLAEIRRRVDESPGANT
FLVSSDGTATIVNATFIEQSVDYGKVFDAVQAIVKNETDAAHEIHAAGFPVMTGWIYAFGDNTLEIFAITLILMFGVLAF
HMRNVAGILVPVLVSAVSAIWGFGLVGWLGLPVEPLLMVVPLLLIARCFSHCVQATERYFELLHDGHPKDKAAELSLVSL
VYPGTLGIFTDVCGLLLVALAPIPAMERFALFTGLWALNLVPCSVFLTPILLSLMPRPNNIEHLLGNDQHSGPVQRGIQG
TLGGFAALSTGRNARYTGIVFIVLGIVAVFLMLRVQVGNPVEGTNLLRYDSKFNLAVREINQHFPGSMTMEVVFEGKGNA
RIVRQSDTLTTMRDLQHCLESSPNPPTATLSFADLAPEANRVFSGGNPKWSPLDNDDASASAAVTGLMAGTNAKAFLHVT
DFEQKNGTVSLWYSNNKQETVDTALAQARACVEKVGPEHPTFTIRLASGAIALQQSINDTVVRYESRILLALNLVILIGC
SLAYRSIVAGLLLLIPVNLANAMLTASMSLAGVGLDVNSLPILAIGIGVGIDYGIYLMTRICEEYQVANKDLGVAIRVAL
KTCGKAIFFTASLMTIGLAPWYFLSELKFLSDTGLLLVILMLINMVLALVLLPLLVYLIKPKFLDSDMSALSESLEKKPQ
TAVPA

Sequences:

>Translated_805_residues
MEKIDLRRKLARFALGNRWAILVVMGLITAFFAVGLVRVDVKTIFSDLFPKNHPFVQVYKDHPNFGNPLTVTLMIKRVDG
KDVFQADTLEKIWRISRDIDLTPGVDHDQILSIATSKARYTVITPDGIFSQPIMDDELPKTAEQLAEIRRRVDESPGANT
FLVSSDGTATIVNATFIEQSVDYGKVFDAVQAIVKNETDAAHEIHAAGFPVMTGWIYAFGDNTLEIFAITLILMFGVLAF
HMRNVAGILVPVLVSAVSAIWGFGLVGWLGLPVEPLLMVVPLLLIARCFSHCVQATERYFELLHDGHPKDKAAELSLVSL
VYPGTLGIFTDVCGLLLVALAPIPAMERFALFTGLWALNLVPCSVFLTPILLSLMPRPNNIEHLLGNDQHSGPVQRGIQG
TLGGFAALSTGRNARYTGIVFIVLGIVAVFLMLRVQVGNPVEGTNLLRYDSKFNLAVREINQHFPGSMTMEVVFEGKGNA
RIVRQSDTLTTMRDLQHCLESSPNPPTATLSFADLAPEANRVFSGGNPKWSPLDNDDASASAAVTGLMAGTNAKAFLHVT
DFEQKNGTVSLWYSNNKQETVDTALAQARACVEKVGPEHPTFTIRLASGAIALQQSINDTVVRYESRILLALNLVILIGC
SLAYRSIVAGLLLLIPVNLANAMLTASMSLAGVGLDVNSLPILAIGIGVGIDYGIYLMTRICEEYQVANKDLGVAIRVAL
KTCGKAIFFTASLMTIGLAPWYFLSELKFLSDTGLLLVILMLINMVLALVLLPLLVYLIKPKFLDSDMSALSESLEKKPQ
TAVPA
>Mature_805_residues
MEKIDLRRKLARFALGNRWAILVVMGLITAFFAVGLVRVDVKTIFSDLFPKNHPFVQVYKDHPNFGNPLTVTLMIKRVDG
KDVFQADTLEKIWRISRDIDLTPGVDHDQILSIATSKARYTVITPDGIFSQPIMDDELPKTAEQLAEIRRRVDESPGANT
FLVSSDGTATIVNATFIEQSVDYGKVFDAVQAIVKNETDAAHEIHAAGFPVMTGWIYAFGDNTLEIFAITLILMFGVLAF
HMRNVAGILVPVLVSAVSAIWGFGLVGWLGLPVEPLLMVVPLLLIARCFSHCVQATERYFELLHDGHPKDKAAELSLVSL
VYPGTLGIFTDVCGLLLVALAPIPAMERFALFTGLWALNLVPCSVFLTPILLSLMPRPNNIEHLLGNDQHSGPVQRGIQG
TLGGFAALSTGRNARYTGIVFIVLGIVAVFLMLRVQVGNPVEGTNLLRYDSKFNLAVREINQHFPGSMTMEVVFEGKGNA
RIVRQSDTLTTMRDLQHCLESSPNPPTATLSFADLAPEANRVFSGGNPKWSPLDNDDASASAAVTGLMAGTNAKAFLHVT
DFEQKNGTVSLWYSNNKQETVDTALAQARACVEKVGPEHPTFTIRLASGAIALQQSINDTVVRYESRILLALNLVILIGC
SLAYRSIVAGLLLLIPVNLANAMLTASMSLAGVGLDVNSLPILAIGIGVGIDYGIYLMTRICEEYQVANKDLGVAIRVAL
KTCGKAIFFTASLMTIGLAPWYFLSELKFLSDTGLLLVILMLINMVLALVLLPLLVYLIKPKFLDSDMSALSESLEKKPQ
TAVPA

Specific function: Unknown

COG id: COG1033

COG function: function code R; Predicted exporters of the RND superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 87619; Mature: 87619

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS50156 SSD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIDLRRKLARFALGNRWAILVVMGLITAFFAVGLVRVDVKTIFSDLFPKNHPFVQVYK
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DHPNFGNPLTVTLMIKRVDGKDVFQADTLEKIWRISRDIDLTPGVDHDQILSIATSKARY
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCEE
TVITPDGIFSQPIMDDELPKTAEQLAEIRRRVDESPGANTFLVSSDGTATIVNATFIEQS
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHC
VDYGKVFDAVQAIVKNETDAAHEIHAAGFPVMTGWIYAFGDNTLEIFAITLILMFGVLAF
CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
HMRNVAGILVPVLVSAVSAIWGFGLVGWLGLPVEPLLMVVPLLLIARCFSHCVQATERYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLHDGHPKDKAAELSLVSLVYPGTLGIFTDVCGLLLVALAPIPAMERFALFTGLWALNL
HHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VPCSVFLTPILLSLMPRPNNIEHLLGNDQHSGPVQRGIQGTLGGFAALSTGRNARYTGIV
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHH
FIVLGIVAVFLMLRVQVGNPVEGTNLLRYDSKFNLAVREINQHFPGSMTMEVVFEGKGNA
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCE
RIVRQSDTLTTMRDLQHCLESSPNPPTATLSFADLAPEANRVFSGGNPKWSPLDNDDASA
EEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCHHHEECCCCCCCCCCCCCCCCH
SAAVTGLMAGTNAKAFLHVTDFEQKNGTVSLWYSNNKQETVDTALAQARACVEKVGPEHP
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
TFTIRLASGAIALQQSINDTVVRYESRILLALNLVILIGCSLAYRSIVAGLLLLIPVNLA
EEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAMLTASMSLAGVGLDVNSLPILAIGIGVGIDYGIYLMTRICEEYQVANKDLGVAIRVAL
HHHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KTCGKAIFFTASLMTIGLAPWYFLSELKFLSDTGLLLVILMLINMVLALVLLPLLVYLIK
HHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKFLDSDMSALSESLEKKPQTAVPA
CCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEKIDLRRKLARFALGNRWAILVVMGLITAFFAVGLVRVDVKTIFSDLFPKNHPFVQVYK
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
DHPNFGNPLTVTLMIKRVDGKDVFQADTLEKIWRISRDIDLTPGVDHDQILSIATSKARY
CCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCEE
TVITPDGIFSQPIMDDELPKTAEQLAEIRRRVDESPGANTFLVSSDGTATIVNATFIEQS
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEHHHHHHC
VDYGKVFDAVQAIVKNETDAAHEIHAAGFPVMTGWIYAFGDNTLEIFAITLILMFGVLAF
CCHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCEEEEECCCHHHHHHHHHHHHHHHHHH
HMRNVAGILVPVLVSAVSAIWGFGLVGWLGLPVEPLLMVVPLLLIARCFSHCVQATERYF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELLHDGHPKDKAAELSLVSLVYPGTLGIFTDVCGLLLVALAPIPAMERFALFTGLWALNL
HHHHCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VPCSVFLTPILLSLMPRPNNIEHLLGNDQHSGPVQRGIQGTLGGFAALSTGRNARYTGIV
HHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCHHHHH
FIVLGIVAVFLMLRVQVGNPVEGTNLLRYDSKFNLAVREINQHFPGSMTMEVVFEGKGNA
HHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCEEEEEEEECCCCE
RIVRQSDTLTTMRDLQHCLESSPNPPTATLSFADLAPEANRVFSGGNPKWSPLDNDDASA
EEEECCCHHHHHHHHHHHHHCCCCCCCEEEEHHHCCCCHHHEECCCCCCCCCCCCCCCCH
SAAVTGLMAGTNAKAFLHVTDFEQKNGTVSLWYSNNKQETVDTALAQARACVEKVGPEHP
HHHHHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCC
TFTIRLASGAIALQQSINDTVVRYESRILLALNLVILIGCSLAYRSIVAGLLLLIPVNLA
EEEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAMLTASMSLAGVGLDVNSLPILAIGIGVGIDYGIYLMTRICEEYQVANKDLGVAIRVAL
HHHHHHHHHHEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KTCGKAIFFTASLMTIGLAPWYFLSELKFLSDTGLLLVILMLINMVLALVLLPLLVYLIK
HHHCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKFLDSDMSALSESLEKKPQTAVPA
CCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA