Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

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The map label for this gene is 124265591

Identifier: 124265591

GI number: 124265591

Start: 434449

End: 435816

Strand: Direct

Name: 124265591

Synonym: Mpe_A0398

Alternate gene names: NA

Gene position: 434449-435816 (Clockwise)

Preceding gene: 124265590

Following gene: 124265592

Centisome position: 10.74

GC content: 64.69

Gene sequence:

>1368_bases
ATGCATATCAGAAAGTACGACCACGACTACAGCCGACGCTTCTTCATGGAGCAGGCCGCCAAGGGCATTGCGACGGCGGG
GGTGCTGGGTCCGCTGTGGCCGATGATCGCGAACTCCGCGGACATCACCAAGGCCTACCCGGACGAGCTGATGTCGATCG
ACGCCTGGTCCAAGGGCAAGATCAAGACCGGTGACTTCATCACCGCCGAGAACGTCGACATCGTCAAGGACCTGCTCGAC
CCCGTGGCTTACCAGGAAGTCAAGACCATGGGGCGGCGCATCCGCATCGTGCCGACCACCAAGGATGTGACCCGGATGTT
CCCGCACGAATACCTGGAGGCGACCCTGCGCAACCAGGGCAAGGCGAAGTTCGACGCCGGCGGCAACATCGTGTCGCCCG
ATGGCAAGCCCTGGATCGGCGGCAACCCCTTCCCCGATGCGAAGACCGGTGTGGAGGTGGCGGCCAACCTCACGCTGTGC
TGGGGTCGCCACGACAACTCCATCTACGCCATCCGCGACTGGGAGATCGCGCCCGACGGTTCGCAGAGCTACCAGTACGA
CTTCGCCTGGGTGGAGGAGAACTCGGTCGCGCGCGCCCAGGCCAAGAGCTTCCCCGGGGGCGAGGACAAGCTGCGCTACC
AGGCCGTGTTCTTCACCTCGCCGGTCGACGTGAAGGGCACCAGCTACCTGAGCACCTGGTACTACGACCAGCGCAAGTTC
CCCGATCTCTCCGGCTACCTGCCCGCCTTCAAGCGCGTGCGCAAGTTCCCGACCAACCAGCGCTTCGAGCCGCTGGTGGC
CGGGGTGAACTTCTATCTGTCCGACGCCTGGGCGTCCGGCGACCCGATGCTGACCTGGGGCAACTACAAGATCGTCGGCC
GCGGCCCGATGCTCGGTGCGCAGTCGCAGACCTGGTACGGCGATCACCCGAACTGGGAACGCCCGGTGCATGGCGGTCCC
AAGGGCATCACCTTCTTCGACACCAACATGGAGCTGTGCCCCGACGTGGTGGTGTTCGAGGCCGAACCCGTGGGCTACCC
GCGTGCGCCGGTCAGCAAGAAGCGGGTGTGGGTCGACACGCGGAACATGATGTTCGTGGCCTACGTGACCTACGACCGCC
GCGGCGATCTCTTCAAGTCCTTCGAGCCGCAGTTCAGCCTGTACGAGAAGGGCGACAAGAAGCTGATGGACGGCAGCCAC
ACCGCGTGGTCGTGGACCGCGGTGACCTGCCACAACATCCAGGACGGCCGCATGACGCGCTTCCTGCAGACCAAGAGCAT
CGCCGGAGGCGTTTCGCAGGGCTACAACGTCGAGGGCACCTTCGACAAGTACCTGACCGAGCAGGCGCTGCAACGTCTGG
GGACCTGA

Upstream 100 bases:

>100_bases
AGAAGCCTCAGACGGCGGTGCCTGCCTGAGCCCTGTGAGAGTGCGCCGCCCCCCGCTGGGTGGGGACTGCGAATTGTCGA
CAACGAAGTAGGAGACGACC

Downstream 100 bases:

>100_bases
GCATGTCCGAAGGTCGGCAACACGCGCGGCCCGCCGCTCGCGCCGGGCTGTTCGCGCGGTTCGCGGCGATGGCGGTGCTG
CTGTCGGGGGCTGCGGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD
PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC
WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF
PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP
KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH
TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT

Sequences:

>Translated_455_residues
MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD
PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC
WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF
PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP
KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH
TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT
>Mature_455_residues
MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD
PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC
WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF
PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP
KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH
TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51530; Mature: 51530

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHEEECCCCCCC
IKTGDFITAENVDIVKDLLDPVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQG
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHCCC
KAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLCWGRHDNSIYAIRDWEIAPDG
CEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCC
SQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF
CCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC
PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGA
CCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC
QSQTWYGDHPNWERPVHGGPKGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDT
CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC
RNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSHTAWSWTAVTCHNIQDGRMTR
CCEEEEEEEEECCCCCHHHHCCCCCHHHHCCCCHHCCCCCCEEEEEEEEEECCCCCHHHH
FLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHEEECCCCCCC
IKTGDFITAENVDIVKDLLDPVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQG
CCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHCCC
KAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLCWGRHDNSIYAIRDWEIAPDG
CEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCC
SQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF
CCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC
PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGA
CCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC
QSQTWYGDHPNWERPVHGGPKGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDT
CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC
RNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSHTAWSWTAVTCHNIQDGRMTR
CCEEEEEEEEECCCCCHHHHCCCCCHHHHCCCCHHCCCCCCEEEEEEEEEECCCCCHHHH
FLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA