Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265591
Identifier: 124265591
GI number: 124265591
Start: 434449
End: 435816
Strand: Direct
Name: 124265591
Synonym: Mpe_A0398
Alternate gene names: NA
Gene position: 434449-435816 (Clockwise)
Preceding gene: 124265590
Following gene: 124265592
Centisome position: 10.74
GC content: 64.69
Gene sequence:
>1368_bases ATGCATATCAGAAAGTACGACCACGACTACAGCCGACGCTTCTTCATGGAGCAGGCCGCCAAGGGCATTGCGACGGCGGG GGTGCTGGGTCCGCTGTGGCCGATGATCGCGAACTCCGCGGACATCACCAAGGCCTACCCGGACGAGCTGATGTCGATCG ACGCCTGGTCCAAGGGCAAGATCAAGACCGGTGACTTCATCACCGCCGAGAACGTCGACATCGTCAAGGACCTGCTCGAC CCCGTGGCTTACCAGGAAGTCAAGACCATGGGGCGGCGCATCCGCATCGTGCCGACCACCAAGGATGTGACCCGGATGTT CCCGCACGAATACCTGGAGGCGACCCTGCGCAACCAGGGCAAGGCGAAGTTCGACGCCGGCGGCAACATCGTGTCGCCCG ATGGCAAGCCCTGGATCGGCGGCAACCCCTTCCCCGATGCGAAGACCGGTGTGGAGGTGGCGGCCAACCTCACGCTGTGC TGGGGTCGCCACGACAACTCCATCTACGCCATCCGCGACTGGGAGATCGCGCCCGACGGTTCGCAGAGCTACCAGTACGA CTTCGCCTGGGTGGAGGAGAACTCGGTCGCGCGCGCCCAGGCCAAGAGCTTCCCCGGGGGCGAGGACAAGCTGCGCTACC AGGCCGTGTTCTTCACCTCGCCGGTCGACGTGAAGGGCACCAGCTACCTGAGCACCTGGTACTACGACCAGCGCAAGTTC CCCGATCTCTCCGGCTACCTGCCCGCCTTCAAGCGCGTGCGCAAGTTCCCGACCAACCAGCGCTTCGAGCCGCTGGTGGC CGGGGTGAACTTCTATCTGTCCGACGCCTGGGCGTCCGGCGACCCGATGCTGACCTGGGGCAACTACAAGATCGTCGGCC GCGGCCCGATGCTCGGTGCGCAGTCGCAGACCTGGTACGGCGATCACCCGAACTGGGAACGCCCGGTGCATGGCGGTCCC AAGGGCATCACCTTCTTCGACACCAACATGGAGCTGTGCCCCGACGTGGTGGTGTTCGAGGCCGAACCCGTGGGCTACCC GCGTGCGCCGGTCAGCAAGAAGCGGGTGTGGGTCGACACGCGGAACATGATGTTCGTGGCCTACGTGACCTACGACCGCC GCGGCGATCTCTTCAAGTCCTTCGAGCCGCAGTTCAGCCTGTACGAGAAGGGCGACAAGAAGCTGATGGACGGCAGCCAC ACCGCGTGGTCGTGGACCGCGGTGACCTGCCACAACATCCAGGACGGCCGCATGACGCGCTTCCTGCAGACCAAGAGCAT CGCCGGAGGCGTTTCGCAGGGCTACAACGTCGAGGGCACCTTCGACAAGTACCTGACCGAGCAGGCGCTGCAACGTCTGG GGACCTGA
Upstream 100 bases:
>100_bases AGAAGCCTCAGACGGCGGTGCCTGCCTGAGCCCTGTGAGAGTGCGCCGCCCCCCGCTGGGTGGGGACTGCGAATTGTCGA CAACGAAGTAGGAGACGACC
Downstream 100 bases:
>100_bases GCATGTCCGAAGGTCGGCAACACGCGCGGCCCGCCGCTCGCGCCGGGCTGTTCGCGCGGTTCGCGGCGATGGCGGTGCTG CTGTCGGGGGCTGCGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT
Sequences:
>Translated_455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT >Mature_455_residues MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGKIKTGDFITAENVDIVKDLLD PVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQGKAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLC WGRHDNSIYAIRDWEIAPDGSQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGAQSQTWYGDHPNWERPVHGGP KGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDTRNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSH TAWSWTAVTCHNIQDGRMTRFLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51530; Mature: 51530
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHEEECCCCCCC IKTGDFITAENVDIVKDLLDPVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQG CCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHCCC KAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLCWGRHDNSIYAIRDWEIAPDG CEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCC SQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF CCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGA CCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC QSQTWYGDHPNWERPVHGGPKGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDT CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC RNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSHTAWSWTAVTCHNIQDGRMTR CCEEEEEEEEECCCCCHHHHCCCCCHHHHCCCCHHCCCCCCEEEEEEEEEECCCCCHHHH FLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MHIRKYDHDYSRRFFMEQAAKGIATAGVLGPLWPMIANSADITKAYPDELMSIDAWSKGK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHEEECCCCCCC IKTGDFITAENVDIVKDLLDPVAYQEVKTMGRRIRIVPTTKDVTRMFPHEYLEATLRNQG CCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHCCHHHHHHHHHCCC KAKFDAGGNIVSPDGKPWIGGNPFPDAKTGVEVAANLTLCWGRHDNSIYAIRDWEIAPDG CEEECCCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEEEEEECCCC SQSYQYDFAWVEENSVARAQAKSFPGGEDKLRYQAVFFTSPVDVKGTSYLSTWYYDQRKF CCCEEEEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCC PDLSGYLPAFKRVRKFPTNQRFEPLVAGVNFYLSDAWASGDPMLTWGNYKIVGRGPMLGA CCCCCHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCEEEECCEEEEECCCCCCC QSQTWYGDHPNWERPVHGGPKGITFFDTNMELCPDVVVFEAEPVGYPRAPVSKKRVWVDT CCCCEECCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEC RNMMFVAYVTYDRRGDLFKSFEPQFSLYEKGDKKLMDGSHTAWSWTAVTCHNIQDGRMTR CCEEEEEEEEECCCCCHHHHCCCCCHHHHCCCCHHCCCCCCEEEEEEEEEECCCCCHHHH FLQTKSIAGGVSQGYNVEGTFDKYLTEQALQRLGT HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA