Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is phhA [H]
Identifier: 124265540
GI number: 124265540
Start: 382027
End: 382914
Strand: Direct
Name: phhA [H]
Synonym: Mpe_A0347
Alternate gene names: 124265540
Gene position: 382027-382914 (Clockwise)
Preceding gene: 124265539
Following gene: 124265541
Centisome position: 9.45
GC content: 69.26
Gene sequence:
>888_bases ATGAAGAACGACTTCCATGACGGCGTGAACAAGGGCGTGGCACCGGTCACCTACGGGCAGGGCGACCGGCCGCCGCGCGG CGACTACTCGCGCGCGCGGGCCGACTACAGCTGCGAGCAGGACATGGCCCGCTACACCGAGGCCGACCACGAGACCTACC GCCGTCTCTATGCCCGCCAGCTGCGGCAGCTGCCTGGCCTGGCCTGCCAGGCATTCATCGACGCTGTCGAGCAGCTCGGT GCCCCCGACCGCATCCCGCGCTTCAGTGACATCTCCGCGCGGCTGTCGAAGGCCACCGGCTGGCAGATCGTCGGCGTGCC CGGCCTGATCCCCGAGGAGGCCTTCTTCGCGCTGCTCGCCCAACGGAAGTTCCCGGTCACCGACTGGATCCGCACCCCCG AGGAGTTCGACTACGTCGTCGAGCCCGATGTCTTCCACGACCTGTTCGGCCACGTGCCCCTGCTGTTCAACCCGGTGTTC GCCGACTACATGCAGGCCTATGGCGCCGGCGGGCTCAAGGCCAGCCGGCTCGACGCCTGCGAGCTGCTGGCGCGCCTGTA CTGGTACACGGTGGAGTTCGGGCTGATCGACACGCCGCAGGGCCTGCGCGCCTACGGGGCCGGCATCCTGTCGAGCGCCG GCGAGCTGCGCCACGCGGTCCTGTCCCCCGAGCCGCAGCGCATTGCCTTCGATCTGCAGCGGCTGATGCGCACGCTCTAC AAGATCGACAGCTACCAGGCCGGCTACTTCGTGATCGACAGCTTCCGCCAGCTGTTCGACGCCACCGCGCCGGACTTCAC GCCGGTCTATGCGGCAGTGCGCCAGCAGCCGCTGGTGGAGGCCGGCATCGTGCTGGACGGCGAGCGCTGCTTCACGCCAG CCGGCTGA
Upstream 100 bases:
>100_bases GCTCGACCAGATGCGCCGCGGCGTGCTGGCCGGCGAGGCCGCGACGCAGGGCGCCTGACGCGCCACGCTGCTCCTCGCCC GGCAGAGAATCCGCACCGCC
Downstream 100 bases:
>100_bases AGCCGTCACGCCGCCTGGCCTCCCCCAACGGGGGCCCCCGCGAGAGCGATGTGTGACAGGGTGAGCGCACCGAGACTCGT CGGCAGTGAACGCCACTGCC
Product: phenylalanine 4-monooxygenase
Products: NA
Alternate protein names: PAH; Phe-4-monooxygenase [H]
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MKNDFHDGVNKGVAPVTYGQGDRPPRGDYSRARADYSCEQDMARYTEADHETYRRLYARQLRQLPGLACQAFIDAVEQLG APDRIPRFSDISARLSKATGWQIVGVPGLIPEEAFFALLAQRKFPVTDWIRTPEEFDYVVEPDVFHDLFGHVPLLFNPVF ADYMQAYGAGGLKASRLDACELLARLYWYTVEFGLIDTPQGLRAYGAGILSSAGELRHAVLSPEPQRIAFDLQRLMRTLY KIDSYQAGYFVIDSFRQLFDATAPDFTPVYAAVRQQPLVEAGIVLDGERCFTPAG
Sequences:
>Translated_295_residues MKNDFHDGVNKGVAPVTYGQGDRPPRGDYSRARADYSCEQDMARYTEADHETYRRLYARQLRQLPGLACQAFIDAVEQLG APDRIPRFSDISARLSKATGWQIVGVPGLIPEEAFFALLAQRKFPVTDWIRTPEEFDYVVEPDVFHDLFGHVPLLFNPVF ADYMQAYGAGGLKASRLDACELLARLYWYTVEFGLIDTPQGLRAYGAGILSSAGELRHAVLSPEPQRIAFDLQRLMRTLY KIDSYQAGYFVIDSFRQLFDATAPDFTPVYAAVRQQPLVEAGIVLDGERCFTPAG >Mature_295_residues MKNDFHDGVNKGVAPVTYGQGDRPPRGDYSRARADYSCEQDMARYTEADHETYRRLYARQLRQLPGLACQAFIDAVEQLG APDRIPRFSDISARLSKATGWQIVGVPGLIPEEAFFALLAQRKFPVTDWIRTPEEFDYVVEPDVFHDLFGHVPLLFNPVF ADYMQAYGAGGLKASRLDACELLARLYWYTVEFGLIDTPQGLRAYGAGILSSAGELRHAVLSPEPQRIAFDLQRLMRTLY KIDSYQAGYFVIDSFRQLFDATAPDFTPVYAAVRQQPLVEAGIVLDGERCFTPAG
Specific function: Unknown
COG id: COG3186
COG function: function code E; Phenylalanine-4-hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the biopterin-dependent aromatic amino acid hydroxylase family [H]
Homologues:
Organism=Homo sapiens, GI88900503, Length=266, Percent_Identity=36.8421052631579, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI88900505, Length=266, Percent_Identity=36.8421052631579, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI88900501, Length=266, Percent_Identity=36.8421052631579, Blast_Score=131, Evalue=9e-31, Organism=Homo sapiens, GI31795563, Length=221, Percent_Identity=38.0090497737557, Blast_Score=128, Evalue=5e-30, Organism=Homo sapiens, GI4759248, Length=218, Percent_Identity=35.7798165137615, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI4557819, Length=211, Percent_Identity=37.4407582938389, Blast_Score=122, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17531391, Length=239, Percent_Identity=39.3305439330544, Blast_Score=140, Evalue=6e-34, Organism=Caenorhabditis elegans, GI71980736, Length=217, Percent_Identity=35.9447004608295, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI115533973, Length=272, Percent_Identity=33.8235294117647, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI115532103, Length=274, Percent_Identity=33.5766423357664, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71980731, Length=149, Percent_Identity=32.2147651006711, Blast_Score=81, Evalue=6e-16, Organism=Drosophila melanogaster, GI24660393, Length=251, Percent_Identity=35.0597609561753, Blast_Score=127, Evalue=8e-30, Organism=Drosophila melanogaster, GI62472054, Length=251, Percent_Identity=35.0597609561753, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI17136776, Length=221, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI17136774, Length=221, Percent_Identity=35.2941176470588, Blast_Score=122, Evalue=4e-28, Organism=Drosophila melanogaster, GI24654994, Length=176, Percent_Identity=40.3409090909091, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001273 - InterPro: IPR018301 - InterPro: IPR019774 - InterPro: IPR005960 [H]
Pfam domain/function: PF00351 Biopterin_H [H]
EC number: =1.14.16.1 [H]
Molecular weight: Translated: 33135; Mature: 33135
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00367 BIOPTERIN_HYDROXYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNDFHDGVNKGVAPVTYGQGDRPPRGDYSRARADYSCEQDMARYTEADHETYRRLYARQ CCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LRQLPGLACQAFIDAVEQLGAPDRIPRFSDISARLSKATGWQIVGVPGLIPEEAFFALLA HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH QRKFPVTDWIRTPEEFDYVVEPDVFHDLFGHVPLLFNPVFADYMQAYGAGGLKASRLDAC HCCCCHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH ELLARLYWYTVEFGLIDTPQGLRAYGAGILSSAGELRHAVLSPEPQRIAFDLQRLMRTLY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KIDSYQAGYFVIDSFRQLFDATAPDFTPVYAAVRQQPLVEAGIVLDGERCFTPAG HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCEECCCHHCCCCC >Mature Secondary Structure MKNDFHDGVNKGVAPVTYGQGDRPPRGDYSRARADYSCEQDMARYTEADHETYRRLYARQ CCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LRQLPGLACQAFIDAVEQLGAPDRIPRFSDISARLSKATGWQIVGVPGLIPEEAFFALLA HHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHH QRKFPVTDWIRTPEEFDYVVEPDVFHDLFGHVPLLFNPVFADYMQAYGAGGLKASRLDAC HCCCCHHHHHCCHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH ELLARLYWYTVEFGLIDTPQGLRAYGAGILSSAGELRHAVLSPEPQRIAFDLQRLMRTLY HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH KIDSYQAGYFVIDSFRQLFDATAPDFTPVYAAVRQQPLVEAGIVLDGERCFTPAG HHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHCCEECCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]