Definition Methylibium petroleiphilum PM1 chromosome, complete genome.
Accession NC_008825
Length 4,044,195

Click here to switch to the map view.

The map label for this gene is 124265541

Identifier: 124265541

GI number: 124265541

Start: 383027

End: 383863

Strand: Direct

Name: 124265541

Synonym: Mpe_A0348

Alternate gene names: NA

Gene position: 383027-383863 (Clockwise)

Preceding gene: 124265540

Following gene: 124265545

Centisome position: 9.47

GC content: 73.36

Gene sequence:

>837_bases
ATGTCGCCCCAGTTGTCCACCCGCTGCGCACTGGCCTTGCTGGGGGCGATGCTGTTCGCGAGCCTGATGGGCCTGCTCGC
CTGGGGGCCGGTCGGCTATCCGGCGCAGACCGACCGCAACACCGACTCGCGCACCGTCCTCGGTCTGGTGCAGGGCTGGA
ACCTGCTGTCGCTGCTGCCCCTGTTCGCGGCCAGCGTGGCGGGCACCGTCGGCCTGCGCCGCCACCGCGCTGGCGGCCCG
CGTCGCCTGGCGTGGCGCCTGTTCTTCGGCGCGGCCATGCTGACCACCGTGGTCGGCGCACTGGACCATCTTGCGCCGGG
CGATGTCGGCTTCCTGCTGAGGCAGGTCGCCACCGCCAGTGTTTGCGTCCTGCTGTCCCTGATCTACCTTGCAGAACGGC
TGGGGCCTCGCTGGGTCACTCCCGGGCTGCTGGCGGCGGCCGTCGCGAGCGGGCCGCTCGGCGGTCTGGCCTGCGCAGCC
AGCGCGGCCTGGCTCGGCGGTCCTGACTTGCGCTGGCTGCTGTGGCTCGAGTTGCTGCCGGTGCTGCTGATGCCGCTCGG
CGTGTGGGGGCTGCGCAGCGACGGCCTGCGCCCACGCGACTGGATCGTGGCGCTGCTGTGGTTCGCAGCGGCGAGGTTCG
TCGACGCCGCAGATGGCTGGGTGTGGCAGGCCAGCGGCGGGGTGTTCAGCGGCCACGCCGTGCACCACCTGCTGCTCGCG
GGCTGTATCGGCTGGCTCGCCTGGCGGGTGTTGCGTCAGCGCCCCGACGCGCCGCCGGCCACGCACGAGGAGCTGGCGGC
AAGCCAGCGCGCCGCCTCGCTCACCACCTCCGGGTGA

Upstream 100 bases:

>100_bases
GCCTGGCCTCCCCCAACGGGGGCCCCCGCGAGAGCGATGTGTGACAGGGTGAGCGCACCGAGACTCGTCGGCAGTGAACG
CCACTGCCCCGCTGCCCTCG

Downstream 100 bases:

>100_bases
AACACCATCGCCACGTGGGCCGTGGCGGGCAGGTGGCGGTTGTCGGCGCCTGGCAGGGTGGCGGCGCAGGCCGGGAACAC
GATGTTGTCGGCGTGGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGP
RRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAA
SAAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA
GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG

Sequences:

>Translated_278_residues
MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGP
RRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAA
SAAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA
GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG
>Mature_277_residues
SPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGPR
RLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAAS
AAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLAG
CIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29497; Mature: 29366

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
LFAASVAGTVGLRRHRAGGPRRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATAS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAASAAWLGGPDLRWLLWLELLP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH
LFAASVAGTVGLRRHRAGGPRRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATAS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
VCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAASAAWLGGPDLRWLLWLELLP
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH
VLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH
GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA