Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265541
Identifier: 124265541
GI number: 124265541
Start: 383027
End: 383863
Strand: Direct
Name: 124265541
Synonym: Mpe_A0348
Alternate gene names: NA
Gene position: 383027-383863 (Clockwise)
Preceding gene: 124265540
Following gene: 124265545
Centisome position: 9.47
GC content: 73.36
Gene sequence:
>837_bases ATGTCGCCCCAGTTGTCCACCCGCTGCGCACTGGCCTTGCTGGGGGCGATGCTGTTCGCGAGCCTGATGGGCCTGCTCGC CTGGGGGCCGGTCGGCTATCCGGCGCAGACCGACCGCAACACCGACTCGCGCACCGTCCTCGGTCTGGTGCAGGGCTGGA ACCTGCTGTCGCTGCTGCCCCTGTTCGCGGCCAGCGTGGCGGGCACCGTCGGCCTGCGCCGCCACCGCGCTGGCGGCCCG CGTCGCCTGGCGTGGCGCCTGTTCTTCGGCGCGGCCATGCTGACCACCGTGGTCGGCGCACTGGACCATCTTGCGCCGGG CGATGTCGGCTTCCTGCTGAGGCAGGTCGCCACCGCCAGTGTTTGCGTCCTGCTGTCCCTGATCTACCTTGCAGAACGGC TGGGGCCTCGCTGGGTCACTCCCGGGCTGCTGGCGGCGGCCGTCGCGAGCGGGCCGCTCGGCGGTCTGGCCTGCGCAGCC AGCGCGGCCTGGCTCGGCGGTCCTGACTTGCGCTGGCTGCTGTGGCTCGAGTTGCTGCCGGTGCTGCTGATGCCGCTCGG CGTGTGGGGGCTGCGCAGCGACGGCCTGCGCCCACGCGACTGGATCGTGGCGCTGCTGTGGTTCGCAGCGGCGAGGTTCG TCGACGCCGCAGATGGCTGGGTGTGGCAGGCCAGCGGCGGGGTGTTCAGCGGCCACGCCGTGCACCACCTGCTGCTCGCG GGCTGTATCGGCTGGCTCGCCTGGCGGGTGTTGCGTCAGCGCCCCGACGCGCCGCCGGCCACGCACGAGGAGCTGGCGGC AAGCCAGCGCGCCGCCTCGCTCACCACCTCCGGGTGA
Upstream 100 bases:
>100_bases GCCTGGCCTCCCCCAACGGGGGCCCCCGCGAGAGCGATGTGTGACAGGGTGAGCGCACCGAGACTCGTCGGCAGTGAACG CCACTGCCCCGCTGCCCTCG
Downstream 100 bases:
>100_bases AACACCATCGCCACGTGGGCCGTGGCGGGCAGGTGGCGGTTGTCGGCGCCTGGCAGGGTGGCGGCGCAGGCCGGGAACAC GATGTTGTCGGCGTGGCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGP RRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAA SAAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG
Sequences:
>Translated_278_residues MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGP RRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAA SAAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG >Mature_277_residues SPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLPLFAASVAGTVGLRRHRAGGPR RLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATASVCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAAS AAWLGGPDLRWLLWLELLPVLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLAG CIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29497; Mature: 29366
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLP CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH LFAASVAGTVGLRRHRAGGPRRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATAS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAASAAWLGGPDLRWLLWLELLP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure SPQLSTRCALALLGAMLFASLMGLLAWGPVGYPAQTDRNTDSRTVLGLVQGWNLLSLLP CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHH LFAASVAGTVGLRRHRAGGPRRLAWRLFFGAAMLTTVVGALDHLAPGDVGFLLRQVATAS HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH VCVLLSLIYLAERLGPRWVTPGLLAAAVASGPLGGLACAASAAWLGGPDLRWLLWLELLP HHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHH VLLMPLGVWGLRSDGLRPRDWIVALLWFAAARFVDAADGWVWQASGGVFSGHAVHHLLLA HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHH GCIGWLAWRVLRQRPDAPPATHEELAASQRAASLTTSG HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA