Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265486
Identifier: 124265486
GI number: 124265486
Start: 317903
End: 319018
Strand: Direct
Name: 124265486
Synonym: Mpe_A0293
Alternate gene names: NA
Gene position: 317903-319018 (Clockwise)
Preceding gene: 124265485
Following gene: 124265488
Centisome position: 7.86
GC content: 71.06
Gene sequence:
>1116_bases ATGAACTCGCGCTTGCTAGCCCAACTAGACGCTGCGATCGCGCAGACGGCGAATCCGGTCGAAGCCGATGTGCTGCGTGC CGAGCGGGTCGGATTGCTGGCGCGCGAAGGCCGCGTCGACGAGGCGCGCAGTGCCTTGACGACGTTGCAACGGCGGCACC AGTCGCGGCCCGATGCGGCCACCGCGGCCGCCCTCTGTCTGGCCGATGCGATGGTCGATTACTTCAGCGACCTGAGCGGT CAGGCGCGCGTCAAGCTGCAGCAGGCGCGGGCACTGAGCCTGTCGGCCAACCGCATGCCGCTGCAGGCCGTGAGTCTGGC CTGGATGGCGCATCTCGATTACGTGCACTCCGACATCGACGGCATCGCCCGCAACGCTTCGCAGGCGCTGCGACTCGCCG CGCCCGACCATCACTCGGCCCGCTCGCGGGCCTGCCTGGTGGTCGCGATGGCCTATCACTACGGTGGCCGCATCGACAGG GCGCAGGGCTGGTACGCGAAGGCGCGCCAGCACGCCAGCGCGGAAGGCGACGCGGCGACCATCAGCGCGCTGATGCACAA CATGGCCGCCCTGCGCAGCGACCAGGCTCGCATGGCCGCCGTGTTCGCCGACGACGCGAAGCAGAGCGACGTGGCGCTGC AAGCGCTGACGGCGGCCGAATCCTCCAGTCACTTCGACGATCGCATGGGCGGCACCGCGCTGGCCGTGTTGCGGCCGATC CTGCGCGCCCAGACGCTGGTGACGCAGTCGCGCTATGCCGAGGCACTGGTGCTGTTCGAGGCGCATTTCGGCGATGCGCT GGCCACCGGCCTGGGCCGCCTGGAGTGCAGCCTGCGCGCGGATGTCGCCTGGTGCCGTGCCAAGCTGGCGCAGCCCGCGC ACGCGCGCGAGCAGGCCAAGGCGGCGGTGGCCGCGCTTCGGCCGGAGTGCGATCTGGACGACGTGGCATTGACGCACGGG CGGCTGGCGCAGGTCCACGAACTGCTGGGCGAGCCCGAGGCCGCTGAGCGGCACGGCCGCCTGGCCCAGGAGCACTGGCA GCGCCATGTCGCCGAGAAGGCGCTCATCGTCGCCGTGCTGGACGCCACCTTCGGTACGTCCGCAAGCCCCGGCTGA
Upstream 100 bases:
>100_bases GCGTTGCCGGCCGACGTGGTGGCGCGGACGGCAGCAAAGTACCGCGAAGCCCTCGAACGCCTAACGGCCTGAACGGCACT TGGCTCCGAGCCGGCCCTGC
Downstream 100 bases:
>100_bases GGGCAGCGGCCGCCCGGCGGCGGGGTCAGGTAAAAATCAGAACAGCACCATGCTGAGCTTGCGGCGGTAGCCGTCGATCA CCGGGTCGCTGGCCACGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MNSRLLAQLDAAIAQTANPVEADVLRAERVGLLAREGRVDEARSALTTLQRRHQSRPDAATAAALCLADAMVDYFSDLSG QARVKLQQARALSLSANRMPLQAVSLAWMAHLDYVHSDIDGIARNASQALRLAAPDHHSARSRACLVVAMAYHYGGRIDR AQGWYAKARQHASAEGDAATISALMHNMAALRSDQARMAAVFADDAKQSDVALQALTAAESSSHFDDRMGGTALAVLRPI LRAQTLVTQSRYAEALVLFEAHFGDALATGLGRLECSLRADVAWCRAKLAQPAHAREQAKAAVAALRPECDLDDVALTHG RLAQVHELLGEPEAAERHGRLAQEHWQRHVAEKALIVAVLDATFGTSASPG
Sequences:
>Translated_371_residues MNSRLLAQLDAAIAQTANPVEADVLRAERVGLLAREGRVDEARSALTTLQRRHQSRPDAATAAALCLADAMVDYFSDLSG QARVKLQQARALSLSANRMPLQAVSLAWMAHLDYVHSDIDGIARNASQALRLAAPDHHSARSRACLVVAMAYHYGGRIDR AQGWYAKARQHASAEGDAATISALMHNMAALRSDQARMAAVFADDAKQSDVALQALTAAESSSHFDDRMGGTALAVLRPI LRAQTLVTQSRYAEALVLFEAHFGDALATGLGRLECSLRADVAWCRAKLAQPAHAREQAKAAVAALRPECDLDDVALTHG RLAQVHELLGEPEAAERHGRLAQEHWQRHVAEKALIVAVLDATFGTSASPG >Mature_371_residues MNSRLLAQLDAAIAQTANPVEADVLRAERVGLLAREGRVDEARSALTTLQRRHQSRPDAATAAALCLADAMVDYFSDLSG QARVKLQQARALSLSANRMPLQAVSLAWMAHLDYVHSDIDGIARNASQALRLAAPDHHSARSRACLVVAMAYHYGGRIDR AQGWYAKARQHASAEGDAATISALMHNMAALRSDQARMAAVFADDAKQSDVALQALTAAESSSHFDDRMGGTALAVLRPI LRAQTLVTQSRYAEALVLFEAHFGDALATGLGRLECSLRADVAWCRAKLAQPAHAREQAKAAVAALRPECDLDDVALTHG RLAQVHELLGEPEAAERHGRLAQEHWQRHVAEKALIVAVLDATFGTSASPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39856; Mature: 39856
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSRLLAQLDAAIAQTANPVEADVLRAERVGLLAREGRVDEARSALTTLQRRHQSRPDAA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH TAAALCLADAMVDYFSDLSGQARVKLQQARALSLSANRMPLQAVSLAWMAHLDYVHSDID HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GIARNASQALRLAAPDHHSARSRACLVVAMAYHYGGRIDRAQGWYAKARQHASAEGDAAT HHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHH ISALMHNMAALRSDQARMAAVFADDAKQSDVALQALTAAESSSHFDDRMGGTALAVLRPI HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHH LRAQTLVTQSRYAEALVLFEAHFGDALATGLGRLECSLRADVAWCRAKLAQPAHAREQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVAALRPECDLDDVALTHGRLAQVHELLGEPEAAERHGRLAQEHWQRHVAEKALIVAVL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH DATFGTSASPG HHHCCCCCCCC >Mature Secondary Structure MNSRLLAQLDAAIAQTANPVEADVLRAERVGLLAREGRVDEARSALTTLQRRHQSRPDAA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH TAAALCLADAMVDYFSDLSGQARVKLQQARALSLSANRMPLQAVSLAWMAHLDYVHSDID HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH GIARNASQALRLAAPDHHSARSRACLVVAMAYHYGGRIDRAQGWYAKARQHASAEGDAAT HHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCHHHH ISALMHNMAALRSDQARMAAVFADDAKQSDVALQALTAAESSSHFDDRMGGTALAVLRPI HHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHHH LRAQTLVTQSRYAEALVLFEAHFGDALATGLGRLECSLRADVAWCRAKLAQPAHAREQAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AAVAALRPECDLDDVALTHGRLAQVHELLGEPEAAERHGRLAQEHWQRHVAEKALIVAVL HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH DATFGTSASPG HHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA