Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is purC
Identifier: 124265485
GI number: 124265485
Start: 316972
End: 317874
Strand: Direct
Name: purC
Synonym: Mpe_A0292
Alternate gene names: 124265485
Gene position: 316972-317874 (Clockwise)
Preceding gene: 124265484
Following gene: 124265486
Centisome position: 7.84
GC content: 67.88
Gene sequence:
>903_bases ATGTCCGCCACCACTCCGCTGCTCGAAAGCCGTCTGCAATCGCTGCCTCTGCTGGCGCGCGGCAAGGTGCGCGACAACTA TGCGGTCGGCAGCGACCGCCTGCTGATGGTCGCGAGCGACCGGCTCAGCGCCTTCGACGTGGTGATGGGCGAGCCCATTC CGGGCAAGGGCGAGTTGCTCACGCGCATGGCGCTGTTCTGGTTCGCGCGGCTCGGCCACATCGTGCCCAACCATCTGACC GGGGACGCTCCGGAAAGTGTGGTCAGCGCGGCGGAGCGGTCCCAGGTCACGGGCCGCTCGATGCTCGTCAAGCGCCTGAA GCCGCTGCCGGTGGAAGCCGTGGTGCGCGGCTACCTGGCGGGCTCGGGCTGGAAGGAATACCAGCACAACGGCCAGGTCT GCGGCGTGAAGCTGCCACCCGGCCTGAAGAACGCCAGCAAGCTGCCGTCGCCCATCTTCACCCCGGCCACCAAGGCCGAG ATGGGTGAGCACGACGAGAACATCCCGTTCGAGCGCATGGTCGAGATCATCGGTGCCCCGCTGGCCGAGCAGGTGCGGCG CGTGGCGATCGCGCTCTACGAGACGGCGGCGGCCTTCGCCCTCGGCAAGGGCATCATCATCGCCGACACGAAGTTCGAGT TCGGCCTCGACGAAGCCGGCACCCTGACGCTGATGGACGAGGTACTGACGCCCGATTCCTCGCGCTTCTGGCCGGTGGAA GGCTATGCCGAGGGCATCAACCCGCCGAGCTACGACAAACAGTTCGTGCGTGACTGGCTTGAACAGGCCGTGGTCGACGG CCGACCGTGGAACAAGCAGGCGCCGGCCCCGGCGTTGCCGGCCGACGTGGTGGCGCGGACGGCAGCAAAGTACCGCGAAG CCCTCGAACGCCTAACGGCCTGA
Upstream 100 bases:
>100_bases GAGACGCTCTCCGTGGTGGCTGCCAAGTACGCCAAGGGAGAACTCGCCCAGGTCGTTCAGTAAGTCTTCACAGTCTCCTC GTCACCGCGCCCCGCCTCAA
Downstream 100 bases:
>100_bases ACGGCACTTGGCTCCGAGCCGGCCCTGCATGAACTCGCGCTTGCTAGCCCAACTAGACGCTGCGATCGCGCAGACGGCGA ATCCGGTCGAAGCCGATGTG
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MSATTPLLESRLQSLPLLARGKVRDNYAVGSDRLLMVASDRLSAFDVVMGEPIPGKGELLTRMALFWFARLGHIVPNHLT GDAPESVVSAAERSQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQHNGQVCGVKLPPGLKNASKLPSPIFTPATKAE MGEHDENIPFERMVEIIGAPLAEQVRRVAIALYETAAAFALGKGIIIADTKFEFGLDEAGTLTLMDEVLTPDSSRFWPVE GYAEGINPPSYDKQFVRDWLEQAVVDGRPWNKQAPAPALPADVVARTAAKYREALERLTA
Sequences:
>Translated_300_residues MSATTPLLESRLQSLPLLARGKVRDNYAVGSDRLLMVASDRLSAFDVVMGEPIPGKGELLTRMALFWFARLGHIVPNHLT GDAPESVVSAAERSQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQHNGQVCGVKLPPGLKNASKLPSPIFTPATKAE MGEHDENIPFERMVEIIGAPLAEQVRRVAIALYETAAAFALGKGIIIADTKFEFGLDEAGTLTLMDEVLTPDSSRFWPVE GYAEGINPPSYDKQFVRDWLEQAVVDGRPWNKQAPAPALPADVVARTAAKYREALERLTA >Mature_299_residues SATTPLLESRLQSLPLLARGKVRDNYAVGSDRLLMVASDRLSAFDVVMGEPIPGKGELLTRMALFWFARLGHIVPNHLTG DAPESVVSAAERSQVTGRSMLVKRLKPLPVEAVVRGYLAGSGWKEYQHNGQVCGVKLPPGLKNASKLPSPIFTPATKAEM GEHDENIPFERMVEIIGAPLAEQVRRVAIALYETAAAFALGKGIIIADTKFEFGLDEAGTLTLMDEVLTPDSSRFWPVEG YAEGINPPSYDKQFVRDWLEQAVVDGRPWNKQAPAPALPADVVARTAAKYREALERLTA
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Saccharomyces cerevisiae, GI6319326, Length=296, Percent_Identity=48.9864864864865, Blast_Score=277, Evalue=1e-75,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_METPP (A2SCG5)
Other databases:
- EMBL: CP000555 - RefSeq: YP_001019489.1 - ProteinModelPortal: A2SCG5 - SMR: A2SCG5 - STRING: A2SCG5 - GeneID: 4786901 - GenomeReviews: CP000555_GR - KEGG: mpt:Mpe_A0292 - NMPDR: fig|279263.3.peg.162 - eggNOG: COG0152 - HOGENOM: HBG555040 - OMA: LTLMDEV - PhylomeDB: A2SCG5 - ProtClustDB: PRK13961 - BioCyc: MPET420662:MPE_A0292-MONOMER - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - InterPro: IPR018236 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 32716; Mature: 32585
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSATTPLLESRLQSLPLLARGKVRDNYAVGSDRLLMVASDRLSAFDVVMGEPIPGKGELL CCCCCHHHHHHHHHCCCHHCCCCCCCEECCCCCEEEEECCCHHHHHHHHCCCCCCHHHHH TRMALFWFARLGHIVPNHLTGDAPESVVSAAERSQVTGRSMLVKRLKPLPVEAVVRGYLA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GSGWKEYQHNGQVCGVKLPPGLKNASKLPSPIFTPATKAEMGEHDENIPFERMVEIIGAP CCCHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC LAEQVRRVAIALYETAAAFALGKGIIIADTKFEFGLDEAGTLTLMDEVLTPDSSRFWPVE HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC GYAEGINPPSYDKQFVRDWLEQAVVDGRPWNKQAPAPALPADVVARTAAKYREALERLTA CHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SATTPLLESRLQSLPLLARGKVRDNYAVGSDRLLMVASDRLSAFDVVMGEPIPGKGELL CCCCHHHHHHHHHCCCHHCCCCCCCEECCCCCEEEEECCCHHHHHHHHCCCCCCHHHHH TRMALFWFARLGHIVPNHLTGDAPESVVSAAERSQVTGRSMLVKRLKPLPVEAVVRGYLA HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC GSGWKEYQHNGQVCGVKLPPGLKNASKLPSPIFTPATKAEMGEHDENIPFERMVEIIGAP CCCHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC LAEQVRRVAIALYETAAAFALGKGIIIADTKFEFGLDEAGTLTLMDEVLTPDSSRFWPVE HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC GYAEGINPPSYDKQFVRDWLEQAVVDGRPWNKQAPAPALPADVVARTAAKYREALERLTA CHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA