Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is cbbA [H]
Identifier: 124265484
GI number: 124265484
Start: 315870
End: 316934
Strand: Direct
Name: cbbA [H]
Synonym: Mpe_A0291
Alternate gene names: 124265484
Gene position: 315870-316934 (Clockwise)
Preceding gene: 124265483
Following gene: 124265485
Centisome position: 7.81
GC content: 63.57
Gene sequence:
>1065_bases ATGCCCCTCGTTTCCATGCGCCAGCTGCTCGATCATGCCGCCGAGCAGGGCTATGGCATCCCGGCCTTCAACGTCAACAA CCTCGAACAGGTGCAGGCCGTGATGAGTGCCGCCCACGAAGTCGGTGCGCCGGTGATCCTGCAGGCCAGCGCCGGTGCGC GCAAGTACGCCGGCGAGAACTTCATCAAGCACCTGATCCAGGCGGCGATCGAGACCTGGCCGCACATCCCGCTGGTCATG CACCAGGACCACGGCCAGAGCCCCGACGTGTGCCAGGGCGCCATCGACCTGGGCTTCAGCTCGGTGATGATGGACGGCTC GCTGCAGGCCGACGGCAAGACGATCGCCAGCTACGACTACAACGTCGAGGTGACCCGCAAGGTCGTCGACATGGCGCACA AGCTCGGCGTGACGGTCGAAGGCGAACTCGGTTGCCTCGGCTCGCTCGAGACGATGAAGGGTGACAAGGAAGACGGTCAC GGCACCGACGCCACGATGACCGTGGAGCAGTTGCTCACCGACCCTGAAGAGGCGGCCGACTTCGTCAAGCGCACCCAGCT CGACGCGCTGGCCATTGCCATTGGCACCAGCCACGGCGCCTACAAGTTCACGCGCAAGCCCACCGGCGACATCCTGGCGA TCAAGCGCATCAAGGAGATCAATGCGCGGATCCCCAACACCCACCTGGTGATGCACGGCAGCTCCAGCGTGCCGCAGGAT CTGCTGGCCGAGATCCGAAAGTACGGCGGCGACATGAAGGAAACCTACGGCGTGCCAGTGTCGGAGATCCAGGAAGCCAT CAAGTTCGGCGTACGCAAGATCAACATCGACACCGACATCCGTCTTGCGATGACTGCGGCGATCCGCAAGTTCTTCGTCG AGAACCCCGGCAAGTTCGATCCGCGCGAGTACCTGAAGCCGGCAACGGCCGCGGCCAAGTCCATCTGCAAGCAGCGCTAC GTCGAGTTCGGCTGTGAGGGTCAGGCACCCAAGATCAAGGGCGAGACGCTCTCCGTGGTGGCTGCCAAGTACGCCAAGGG AGAACTCGCCCAGGTCGTTCAGTAA
Upstream 100 bases:
>100_bases ACGGACGGTCTCCGGCGCCGATCGGACGCCTAAAATCAGGGTTTCGCGGGCTCGCCGTCCGGCCTGCCGCTCCTTTCGCT GTCGACTTTCGGAGATCCCC
Downstream 100 bases:
>100_bases GTCTTCACAGTCTCCTCGTCACCGCGCCCCGCCTCAAATGTCCGCCACCACTCCGCTGCTCGAAAGCCGTCTGCAATCGC TGCCTCTGCTGGCGCGCGGC
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPLVSMRQLLDHAAEQGYGIPAFNVNNLEQVQAVMSAAHEVGAPVILQASAGARKYAGENFIKHLIQAAIETWPHIPLVM HQDHGQSPDVCQGAIDLGFSSVMMDGSLQADGKTIASYDYNVEVTRKVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGH GTDATMTVEQLLTDPEEAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIKRIKEINARIPNTHLVMHGSSSVPQD LLAEIRKYGGDMKETYGVPVSEIQEAIKFGVRKINIDTDIRLAMTAAIRKFFVENPGKFDPREYLKPATAAAKSICKQRY VEFGCEGQAPKIKGETLSVVAAKYAKGELAQVVQ
Sequences:
>Translated_354_residues MPLVSMRQLLDHAAEQGYGIPAFNVNNLEQVQAVMSAAHEVGAPVILQASAGARKYAGENFIKHLIQAAIETWPHIPLVM HQDHGQSPDVCQGAIDLGFSSVMMDGSLQADGKTIASYDYNVEVTRKVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGH GTDATMTVEQLLTDPEEAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIKRIKEINARIPNTHLVMHGSSSVPQD LLAEIRKYGGDMKETYGVPVSEIQEAIKFGVRKINIDTDIRLAMTAAIRKFFVENPGKFDPREYLKPATAAAKSICKQRY VEFGCEGQAPKIKGETLSVVAAKYAKGELAQVVQ >Mature_353_residues PLVSMRQLLDHAAEQGYGIPAFNVNNLEQVQAVMSAAHEVGAPVILQASAGARKYAGENFIKHLIQAAIETWPHIPLVMH QDHGQSPDVCQGAIDLGFSSVMMDGSLQADGKTIASYDYNVEVTRKVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGHG TDATMTVEQLLTDPEEAADFVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIKRIKEINARIPNTHLVMHGSSSVPQDL LAEIRKYGGDMKETYGVPVSEIQEAIKFGVRKINIDTDIRLAMTAAIRKFFVENPGKFDPREYLKPATAAAKSICKQRYV EFGCEGQAPKIKGETLSVVAAKYAKGELAQVVQ
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=32.5227963525836, Blast_Score=173, Evalue=1e-44, Organism=Escherichia coli, GI1789526, Length=319, Percent_Identity=32.9153605015674, Blast_Score=170, Evalue=2e-43, Organism=Escherichia coli, GI1788072, Length=330, Percent_Identity=30.3030303030303, Blast_Score=127, Evalue=1e-30, Organism=Escherichia coli, GI1789293, Length=351, Percent_Identity=25.0712250712251, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 38418; Mature: 38287
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS00602 ALDOLASE_CLASS_II_1 ; PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSMRQLLDHAAEQGYGIPAFNVNNLEQVQAVMSAAHEVGAPVILQASAGARKYAGEN CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FIKHLIQAAIETWPHIPLVMHQDHGQSPDVCQGAIDLGFSSVMMDGSLQADGKTIASYDY HHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEEECC NVEVTRKVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGHGTDATMTVEQLLTDPEEAAD CHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH FVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIKRIKEINARIPNTHLVMHGSSSVPQD HHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHH LLAEIRKYGGDMKETYGVPVSEIQEAIKFGVRKINIDTDIRLAMTAAIRKFFVENPGKFD HHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCC PREYLKPATAAAKSICKQRYVEFGCEGQAPKIKGETLSVVAAKYAKGELAQVVQ HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLVSMRQLLDHAAEQGYGIPAFNVNNLEQVQAVMSAAHEVGAPVILQASAGARKYAGEN CHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FIKHLIQAAIETWPHIPLVMHQDHGQSPDVCQGAIDLGFSSVMMDGSLQADGKTIASYDY HHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCHHHHHCCCCCCCCCCEEEEECC NVEVTRKVVDMAHKLGVTVEGELGCLGSLETMKGDKEDGHGTDATMTVEQLLTDPEEAAD CHHHHHHHHHHHHHHCCEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHH FVKRTQLDALAIAIGTSHGAYKFTRKPTGDILAIKRIKEINARIPNTHLVMHGSSSVPQD HHHHHHHHHEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCHH LLAEIRKYGGDMKETYGVPVSEIQEAIKFGVRKINIDTDIRLAMTAAIRKFFVENPGKFD HHHHHHHHCCCHHHHCCCCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCCC PREYLKPATAAAKSICKQRYVEFGCEGQAPKIKGETLSVVAAKYAKGELAQVVQ HHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550527 [H]