Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is pgk [H]
Identifier: 124265482
GI number: 124265482
Start: 313071
End: 314264
Strand: Direct
Name: pgk [H]
Synonym: Mpe_A0289
Alternate gene names: 124265482
Gene position: 313071-314264 (Clockwise)
Preceding gene: 124265481
Following gene: 124265483
Centisome position: 7.74
GC content: 68.68
Gene sequence:
>1194_bases TTGAAGGTTCTGCGGTTCTCCGATCTCATCCAGCAAGGTCGCGTCGCCGGCCAACGTGTCTTCATCCGGGCCGATCTGAA CGTGCCGCAGGACGACGCCGGGCGCATCACCGAGGACACCCGCATCCGCGCCTCGATCCCCTGCATCGAGATGGCGCTGG CGGCCGGTGCGGCCGTGATGGTGACCTCGCACCTGGGCCGTCCGACCGAGGGCGAGTTCAAGGCCGAGGACTCCCTGGCG CCGGTCGCGCGCCGTCTGGCCGAGTTGCTGGGCCGCAAGGTGCCGCTGCTGCAGGACTGGACCGGCGGTGTCGAAGTCGC GCCGGGTGAACTGGTGCTGCTCGAGAACTGCCGCGTCAACAAGGGCGAGAAGAAGAACGACGAAACGCTGGCCCGGAAGA TGGCCGCGCTCTGCGACATCTTCGTGCACGACGCCTTCGGCACCGCGCACCGCGCCGAGGCCTCGACCTATGGCATTGCG CAGTTCGCCAAGGTGGCCTGTGCCGGCCCGCTGCTGGCGGCCGAGATCGACGCCATCACCAAGGCCCTGAAGAGCCCGAA GCGCCCGCTGGTGGCCATCGTGGCGGGCTCCAAGGTCAGCACCAAGCTGTCGATCCTGAAGTCGCTGGCGGCCAACGTCG ACCAGCTGATCGTCGGCGGCGGCATCGCCAACACGTTCATGCTGGCGGTCGGTCTGTCCATCGGCAAGTCGCTGGCCGAG CCCGATCTGGTGGATGAGGCGCGCGCCATCATCGACATGATGAAGGCGCGTGGCGCCGCGGTGCCGATCCCGATCGACGT GGTCGTGGCCGACGAGTTCTCTGCCATCGCACGCGCCAACAAGGTGACCGCCACCGAGGTGCGGCCCGATGACCTGATCC TCGACATCGGCCCGCGCACCGCGGCCGAGCTGGCCGGCATCATCGCGCGCGCCGGCACGGTGGTCTGGAACGGGCCGATG GGCGTGTTCGAATACGACCAGTTCGCCGGCGGAACGCGCACGCTGGCTGCGGCCATCGCCCATTCGCCGGCTTTCAGCAT CGCCGGCGGCGGCGACACACTGGCGGCGATCGCAAAGTACGGCATCGAGAAGGACATCGGCTACATCTCCACCGGTGGCG GCGCCTTCCTCGAGGTGCTGGAGGGCAAGACCCTGCCGGCCTTCGAGATCCTCGAGCAGCGGGCCGCCGGCTGA
Upstream 100 bases:
>100_bases GCTGCCCCTGCGCTTGGTGCTGGGCTGGTAGTCCACGGCGGCCGGAACGCGCGCCACTCGCCATTCCCTTCGTTTTCCCC ACCATCCGAGGAGTCAGTCT
Downstream 100 bases:
>100_bases GCGGCATGACGACACGGGGCGCTGCGGCGCCCCTCGCTTCATCGGAATCTTCTTCACATGACCATGCACCGCGCCACCAA GATCGTCGCCACCCTCGGCC
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKVLRFSDLIQQGRVAGQRVFIRADLNVPQDDAGRITEDTRIRASIPCIEMALAAGAAVMVTSHLGRPTEGEFKAEDSLA PVARRLAELLGRKVPLLQDWTGGVEVAPGELVLLENCRVNKGEKKNDETLARKMAALCDIFVHDAFGTAHRAEASTYGIA QFAKVACAGPLLAAEIDAITKALKSPKRPLVAIVAGSKVSTKLSILKSLAANVDQLIVGGGIANTFMLAVGLSIGKSLAE PDLVDEARAIIDMMKARGAAVPIPIDVVVADEFSAIARANKVTATEVRPDDLILDIGPRTAAELAGIIARAGTVVWNGPM GVFEYDQFAGGTRTLAAAIAHSPAFSIAGGGDTLAAIAKYGIEKDIGYISTGGGAFLEVLEGKTLPAFEILEQRAAG
Sequences:
>Translated_397_residues MKVLRFSDLIQQGRVAGQRVFIRADLNVPQDDAGRITEDTRIRASIPCIEMALAAGAAVMVTSHLGRPTEGEFKAEDSLA PVARRLAELLGRKVPLLQDWTGGVEVAPGELVLLENCRVNKGEKKNDETLARKMAALCDIFVHDAFGTAHRAEASTYGIA QFAKVACAGPLLAAEIDAITKALKSPKRPLVAIVAGSKVSTKLSILKSLAANVDQLIVGGGIANTFMLAVGLSIGKSLAE PDLVDEARAIIDMMKARGAAVPIPIDVVVADEFSAIARANKVTATEVRPDDLILDIGPRTAAELAGIIARAGTVVWNGPM GVFEYDQFAGGTRTLAAAIAHSPAFSIAGGGDTLAAIAKYGIEKDIGYISTGGGAFLEVLEGKTLPAFEILEQRAAG >Mature_397_residues MKVLRFSDLIQQGRVAGQRVFIRADLNVPQDDAGRITEDTRIRASIPCIEMALAAGAAVMVTSHLGRPTEGEFKAEDSLA PVARRLAELLGRKVPLLQDWTGGVEVAPGELVLLENCRVNKGEKKNDETLARKMAALCDIFVHDAFGTAHRAEASTYGIA QFAKVACAGPLLAAEIDAITKALKSPKRPLVAIVAGSKVSTKLSILKSLAANVDQLIVGGGIANTFMLAVGLSIGKSLAE PDLVDEARAIIDMMKARGAAVPIPIDVVVADEFSAIARANKVTATEVRPDDLILDIGPRTAAELAGIIARAGTVVWNGPM GVFEYDQFAGGTRTLAAAIAHSPAFSIAGGGDTLAAIAKYGIEKDIGYISTGGGAFLEVLEGKTLPAFEILEQRAAG
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=406, Percent_Identity=38.6699507389163, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI4505763, Length=406, Percent_Identity=36.2068965517241, Blast_Score=248, Evalue=1e-65, Organism=Escherichia coli, GI1789294, Length=395, Percent_Identity=61.5189873417721, Blast_Score=464, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17508823, Length=409, Percent_Identity=41.320293398533, Blast_Score=287, Evalue=6e-78, Organism=Saccharomyces cerevisiae, GI6319857, Length=411, Percent_Identity=39.1727493917275, Blast_Score=257, Evalue=2e-69, Organism=Drosophila melanogaster, GI17136394, Length=411, Percent_Identity=38.9294403892944, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24581203, Length=400, Percent_Identity=38, Blast_Score=234, Evalue=6e-62,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41558; Mature: 41558
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLRFSDLIQQGRVAGQRVFIRADLNVPQDDAGRITEDTRIRASIPCIEMALAAGAAVM CCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHEE VTSHLGRPTEGEFKAEDSLAPVARRLAELLGRKVPLLQDWTGGVEVAPGELVLLENCRVN HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEECCCCC KGEKKNDETLARKMAALCDIFVHDAFGTAHRAEASTYGIAQFAKVACAGPLLAAEIDAIT CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH KALKSPKRPLVAIVAGSKVSTKLSILKSLAANVDQLIVGGGIANTFMLAVGLSIGKSLAE HHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCC PDLVDEARAIIDMMKARGAAVPIPIDVVVADEFSAIARANKVTATEVRPDDLILDIGPRT CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCCEEECCCCCCEEEECCCCH AAELAGIIARAGTVVWNGPMGVFEYDQFAGGTRTLAAAIAHSPAFSIAGGGDTLAAIAKY HHHHHHHHHHCCEEEECCCCCCEEHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHH GIEKDIGYISTGGGAFLEVLEGKTLPAFEILEQRAAG CCHHCCCEEECCCHHHHHHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure MKVLRFSDLIQQGRVAGQRVFIRADLNVPQDDAGRITEDTRIRASIPCIEMALAAGAAVM CCCCHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEECCCHHHHHHHCCHHEE VTSHLGRPTEGEFKAEDSLAPVARRLAELLGRKVPLLQDWTGGVEVAPGELVLLENCRVN HHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCEEECCCCEEEEECCCCC KGEKKNDETLARKMAALCDIFVHDAFGTAHRAEASTYGIAQFAKVACAGPLLAAEIDAIT CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHH KALKSPKRPLVAIVAGSKVSTKLSILKSLAANVDQLIVGGGIANTFMLAVGLSIGKSLAE HHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCC PDLVDEARAIIDMMKARGAAVPIPIDVVVADEFSAIARANKVTATEVRPDDLILDIGPRT CCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHCCCCEEECCCCCCEEEECCCCH AAELAGIIARAGTVVWNGPMGVFEYDQFAGGTRTLAAAIAHSPAFSIAGGGDTLAAIAKY HHHHHHHHHHCCEEEECCCCCCEEHHHHCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHH GIEKDIGYISTGGGAFLEVLEGKTLPAFEILEQRAAG CCHHCCCEEECCCHHHHHHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA