Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
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Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265481
Identifier: 124265481
GI number: 124265481
Start: 312669
End: 313001
Strand: Direct
Name: 124265481
Synonym: Mpe_A0288
Alternate gene names: NA
Gene position: 312669-313001 (Clockwise)
Preceding gene: 124265480
Following gene: 124265482
Centisome position: 7.73
GC content: 68.47
Gene sequence:
>333_bases TTGAGCACGGGTGAGTTCCTGCTCACGATTGCCGGGCTCACGGTCATCACCGTGGTCACCCGCTCGTTCTTCTTCCTGTC CGACCGCGAGCTGGCGCTGCCCGACTGGGTAAAGCGCGGCCTGCGCTACGCGCCGCTCGCCGCGCTGGCCGCGGTCGTGG TGCCGGAGATCGCCATGAGCCAGGGACAACTGATCGCCGAGCCCTGGCATGACGCCAGGGTCTATGCGGCCGCGGCTGCG ACGGCCTACTTCTTCTGGCGCCGCGGCATTCTGGGCACCATCATCACCGGCATGGCCGTGCTGCTGCCCCTGCGCTTGGT GCTGGGCTGGTAG
Upstream 100 bases:
>100_bases TCGATGGCGGTGACGACGCCGGCCGTCGGCTTCGTGCCTGGCTGGATCGCACCGGCGCGCGCCGTCTCGACGCCCACGCG CGCGACAAGGAGTGCGTCGC
Downstream 100 bases:
>100_bases TCCACGGCGGCCGGAACGCGCGCCACTCGCCATTCCCTTCGTTTTCCCCACCATCCGAGGAGTCAGTCTTTGAAGGTTCT GCGGTTCTCCGATCTCATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MSTGEFLLTIAGLTVITVVTRSFFFLSDRELALPDWVKRGLRYAPLAALAAVVVPEIAMSQGQLIAEPWHDARVYAAAAA TAYFFWRRGILGTIITGMAVLLPLRLVLGW
Sequences:
>Translated_110_residues MSTGEFLLTIAGLTVITVVTRSFFFLSDRELALPDWVKRGLRYAPLAALAAVVVPEIAMSQGQLIAEPWHDARVYAAAAA TAYFFWRRGILGTIITGMAVLLPLRLVLGW >Mature_109_residues STGEFLLTIAGLTVITVVTRSFFFLSDRELALPDWVKRGLRYAPLAALAAVVVPEIAMSQGQLIAEPWHDARVYAAAAAT AYFFWRRGILGTIITGMAVLLPLRLVLGW
Specific function: Unknown
COG id: COG4392
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12063; Mature: 11932
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGEFLLTIAGLTVITVVTRSFFFLSDRELALPDWVKRGLRYAPLAALAAVVVPEIAMS CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHC QGQLIAEPWHDARVYAAAAATAYFFWRRGILGTIITGMAVLLPLRLVLGW CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STGEFLLTIAGLTVITVVTRSFFFLSDRELALPDWVKRGLRYAPLAALAAVVVPEIAMS CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHC QGQLIAEPWHDARVYAAAAATAYFFWRRGILGTIITGMAVLLPLRLVLGW CCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA