Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
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The map label for this gene is 124265454
Identifier: 124265454
GI number: 124265454
Start: 282696
End: 284762
Strand: Direct
Name: 124265454
Synonym: Mpe_A0261
Alternate gene names: NA
Gene position: 282696-284762 (Clockwise)
Preceding gene: 124265453
Following gene: 124265458
Centisome position: 6.99
GC content: 69.23
Gene sequence:
>2067_bases ATGTCAAGCTCGGTGCGGTCGCGCCTCTACACTCCATCCATCGCTTTTTCGAAATCCCCGATGCACTCAATGCAAGCCGC TGTCCGTGTTCTCGCGGCACTCGTCGTGCTGTTTTTCATTCAGCCGATGGTCGTGGGCACCGCGGTGGCCGCCGGTGGCG TGGCAGACGACCTGCCGTCGGCTCGGGTGATCGTCAAGTACCGTGATGATGCCGTTCGCGGCGCCGGCAGCGACCGGGTG AGCATCGCCCATGCCGGGCAGGGCGCGACGGTGCAGCGTCTCGCCGCACGGATGGACGCGGTCGCCCAACGTCGCGGTCT TGCCTTGCGCGCGCACCGTGCCATCAGCGAACGCTCCCAGGTCGTGCTGGCCAGGGGCATCGATTCGGAGACATTGGCGC GGCGACTCCGTGCCGATCCGGACGTTGAGTTCGCGGTGGTCGATCGTCGGGTGAGGCCGCTGGCCGTGCCGAACGATCCG TTGCACACGCTTGGCGGCGCCGACGGCCCTGCCGTGGGGCAGTGGTATCTGCGCACTCCCGCCGCCCCGGCGCTCTCGGC GATCGACGCCACCCGTGCCTGGGACATCACGCAAGGCAGCGCCAGCGTGGTCGTGGCGGTGCTGGACACGGGGGTGCGCT TCGATCATCCCGACCTCGCCGGCAAGTTGCTGGCCGGCTACGATTTCGTCAGTACCCTGCCGGAGTCGAACGATGGCAAC GGGCGTGACAGCAACGCCAGCGATCCGGGTGACTGGATCACCCAGCAGGAAGACAACTCGGTGGGTGGGGACTTCTATCA CTGCACCTCGCCGGACTCACTGGGCAATTACAACGGAGCCCCGAGTTCCTGGCACGGCACGCAGGTTGCCGGCATCGTCG GCGCGCTGACGAACAACGGCGTGGGCATGGCCGGGACCGGCTGGAACACCCGCGTCCTGCCGGTCCGGGTGCTCGGCAAG TGCGGCGGCTACGTGTCGGATGTGGTGATCGGCATGCGCTGGGCGGCCGGCCTGACCGTGCCCAACATCGCGGCCAATCC GAATCCGGCCCGGATACTCAACCTCAGCCTCGGCACCGAGGGGGGCTGCGGCGAGTACCAGGACGCTGTCGACGACGTGG TGGCCGCCGGCGCGCTGGTGGTGGCTGCTGCTGGCAATACGAACGGCCATGCGGTCGGTGCGCCGGGCAATTGCAGTGGC GTGATGGCTGTCGGTGGCCTGCGTCACTCCGGCACCAAGGTCGGTTTCTCCGACCTCGGGTCGGCGGTCTCGATCAGTGC GCCTGCCGGCAACTGCGTCAACGATTTCGGGCCCTGCCTCTACCCGCTGCTCACCACGACCAATTCCGGCTCGCAGGGGC CGGCCTCCTCGGCCTACACCGACGGCACGAACGACATCACCGTCGGCACCAGCTTCTCGGCGCCGCTGGTGTCGGGCGTG GCCGCGCTGATGCTCGCGGTGCAGCCCACGCTCACGCCGGACGAGATCCGGGGCCTGATCCAGGGCGGCTCGCGCCGTTT CCCGAGCACCAGCGCGCCCGTCTGCACGGCGCCGCGTTTCGATGTCAATGGCGACCCCATCGACCAGATCGAGTGCGACT GCACCACCACCACCTGCGGCGCCGGCATGCTCGATGCTCGCGTGGCCGTGCGTTCCGCGGCCGCGGGCCTGATCGCCGAC ATCGTCGTCAACACGGCGACGCCGAGGGCGGGGCAAGACGTTTCTCTGACGGCCGACGTGTTCCGGTTGATCAGCGGCCG CAACCTCAGCAGCCTCAGCTGGAGCTTGGTCGACGGCGGCGGCATCGTCAGCGGCAGTGTCTCCGGGTGCTCGGCCAACT GTGTCGTCTCGCCGACCGGAGCGGGAAGCTTCACCGTCGCGGTCACGGTGACCGATGACAACAACCCCCCGACGCAATCC ACCGTGTCGCGGCGCGTGACGGTGGTGTCGGCGTCGCCGAACGGAGGGGGGGGCGGTGGCGGTGCCCTCGGCGGCCCGGC CTACCTGCTGGCACTGGCGCTGGCCGTGGGGGCTGCCTGGCGGCTGAGCGCAGGGCGCGACGCTTGA
Upstream 100 bases:
>100_bases AGGCCCCCTGTCAGACAAAGGCCCTTTGGGGCCTTTTTCGTGGGCTGGCTTCGCACCATCGGGTAAAGCTCTGTCAACGC AGGCCGATACCGGGCGTGAG
Downstream 100 bases:
>100_bases CGGCGCGGGCTCTCCGCTCGCAGTTCAGAGCGTGTCGGCCGGACAGGGCAGGAATGCCTTGCCGCGCAACTTGTCGGCCG GCAGCGCGGCCAGCGCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MSSSVRSRLYTPSIAFSKSPMHSMQAAVRVLAALVVLFFIQPMVVGTAVAAGGVADDLPSARVIVKYRDDAVRGAGSDRV SIAHAGQGATVQRLAARMDAVAQRRGLALRAHRAISERSQVVLARGIDSETLARRLRADPDVEFAVVDRRVRPLAVPNDP LHTLGGADGPAVGQWYLRTPAAPALSAIDATRAWDITQGSASVVVAVLDTGVRFDHPDLAGKLLAGYDFVSTLPESNDGN GRDSNASDPGDWITQQEDNSVGGDFYHCTSPDSLGNYNGAPSSWHGTQVAGIVGALTNNGVGMAGTGWNTRVLPVRVLGK CGGYVSDVVIGMRWAAGLTVPNIAANPNPARILNLSLGTEGGCGEYQDAVDDVVAAGALVVAAAGNTNGHAVGAPGNCSG VMAVGGLRHSGTKVGFSDLGSAVSISAPAGNCVNDFGPCLYPLLTTTNSGSQGPASSAYTDGTNDITVGTSFSAPLVSGV AALMLAVQPTLTPDEIRGLIQGGSRRFPSTSAPVCTAPRFDVNGDPIDQIECDCTTTTCGAGMLDARVAVRSAAAGLIAD IVVNTATPRAGQDVSLTADVFRLISGRNLSSLSWSLVDGGGIVSGSVSGCSANCVVSPTGAGSFTVAVTVTDDNNPPTQS TVSRRVTVVSASPNGGGGGGGALGGPAYLLALALAVGAAWRLSAGRDA
Sequences:
>Translated_688_residues MSSSVRSRLYTPSIAFSKSPMHSMQAAVRVLAALVVLFFIQPMVVGTAVAAGGVADDLPSARVIVKYRDDAVRGAGSDRV SIAHAGQGATVQRLAARMDAVAQRRGLALRAHRAISERSQVVLARGIDSETLARRLRADPDVEFAVVDRRVRPLAVPNDP LHTLGGADGPAVGQWYLRTPAAPALSAIDATRAWDITQGSASVVVAVLDTGVRFDHPDLAGKLLAGYDFVSTLPESNDGN GRDSNASDPGDWITQQEDNSVGGDFYHCTSPDSLGNYNGAPSSWHGTQVAGIVGALTNNGVGMAGTGWNTRVLPVRVLGK CGGYVSDVVIGMRWAAGLTVPNIAANPNPARILNLSLGTEGGCGEYQDAVDDVVAAGALVVAAAGNTNGHAVGAPGNCSG VMAVGGLRHSGTKVGFSDLGSAVSISAPAGNCVNDFGPCLYPLLTTTNSGSQGPASSAYTDGTNDITVGTSFSAPLVSGV AALMLAVQPTLTPDEIRGLIQGGSRRFPSTSAPVCTAPRFDVNGDPIDQIECDCTTTTCGAGMLDARVAVRSAAAGLIAD IVVNTATPRAGQDVSLTADVFRLISGRNLSSLSWSLVDGGGIVSGSVSGCSANCVVSPTGAGSFTVAVTVTDDNNPPTQS TVSRRVTVVSASPNGGGGGGGALGGPAYLLALALAVGAAWRLSAGRDA >Mature_687_residues SSSVRSRLYTPSIAFSKSPMHSMQAAVRVLAALVVLFFIQPMVVGTAVAAGGVADDLPSARVIVKYRDDAVRGAGSDRVS IAHAGQGATVQRLAARMDAVAQRRGLALRAHRAISERSQVVLARGIDSETLARRLRADPDVEFAVVDRRVRPLAVPNDPL HTLGGADGPAVGQWYLRTPAAPALSAIDATRAWDITQGSASVVVAVLDTGVRFDHPDLAGKLLAGYDFVSTLPESNDGNG RDSNASDPGDWITQQEDNSVGGDFYHCTSPDSLGNYNGAPSSWHGTQVAGIVGALTNNGVGMAGTGWNTRVLPVRVLGKC GGYVSDVVIGMRWAAGLTVPNIAANPNPARILNLSLGTEGGCGEYQDAVDDVVAAGALVVAAAGNTNGHAVGAPGNCSGV MAVGGLRHSGTKVGFSDLGSAVSISAPAGNCVNDFGPCLYPLLTTTNSGSQGPASSAYTDGTNDITVGTSFSAPLVSGVA ALMLAVQPTLTPDEIRGLIQGGSRRFPSTSAPVCTAPRFDVNGDPIDQIECDCTTTTCGAGMLDARVAVRSAAAGLIADI VVNTATPRAGQDVSLTADVFRLISGRNLSSLSWSLVDGGGIVSGSVSGCSANCVVSPTGAGSFTVAVTVTDDNNPPTQST VSRRVTVVSASPNGGGGGGGALGGPAYLLALALAVGAAWRLSAGRDA
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6319893, Length=299, Percent_Identity=27.0903010033445, Blast_Score=69, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007280 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8; PF04151 PPC [H]
EC number: NA
Molecular weight: Translated: 69695; Mature: 69564
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00136 SUBTILASE_ASP ; PS00137 SUBTILASE_HIS ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSVRSRLYTPSIAFSKSPMHSMQAAVRVLAALVVLFFIQPMVVGTAVAAGGVADDLPS CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ARVIVKYRDDAVRGAGSDRVSIAHAGQGATVQRLAARMDAVAQRRGLALRAHRAISERSQ CEEEEEECCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VVLARGIDSETLARRLRADPDVEFAVVDRRVRPLAVPNDPLHTLGGADGPAVGQWYLRTP EEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHCCCCCCCCCCEEEEECC AAPALSAIDATRAWDITQGSASVVVAVLDTGVRFDHPDLAGKLLAGYDFVSTLPESNDGN CCHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHCCCCCCCC GRDSNASDPGDWITQQEDNSVGGDFYHCTSPDSLGNYNGAPSSWHGTQVAGIVGALTNNG CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC VGMAGTGWNTRVLPVRVLGKCGGYVSDVVIGMRWAAGLTVPNIAANPNPARILNLSLGTE CEEECCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GGCGEYQDAVDDVVAAGALVVAAAGNTNGHAVGAPGNCSGVMAVGGLRHSGTKVGFSDLG CCCCHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCEEEECCCCCCCCCCCHHHCC SAVSISAPAGNCVNDFGPCLYPLLTTTNSGSQGPASSAYTDGTNDITVGTSFSAPLVSGV CEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH AALMLAVQPTLTPDEIRGLIQGGSRRFPSTSAPVCTAPRFDVNGDPIDQIECDCTTTTCG HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCC AGMLDARVAVRSAAAGLIADIVVNTATPRAGQDVSLTADVFRLISGRNLSSLSWSLVDGG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC GIVSGSVSGCSANCVVSPTGAGSFTVAVTVTDDNNPPTQSTVSRRVTVVSASPNGGGGGG CEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHCCEEEEEEECCCCCCCCC GALGGPAYLLALALAVGAAWRLSAGRDA CCCCHHHHHHHHHHHHCCCEECCCCCCC >Mature Secondary Structure SSSVRSRLYTPSIAFSKSPMHSMQAAVRVLAALVVLFFIQPMVVGTAVAAGGVADDLPS CCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC ARVIVKYRDDAVRGAGSDRVSIAHAGQGATVQRLAARMDAVAQRRGLALRAHRAISERSQ CEEEEEECCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VVLARGIDSETLARRLRADPDVEFAVVDRRVRPLAVPNDPLHTLGGADGPAVGQWYLRTP EEEEECCCHHHHHHHHCCCCCCEEEEECCCCCCEECCCCCHHHCCCCCCCCCCEEEEECC AAPALSAIDATRAWDITQGSASVVVAVLDTGVRFDHPDLAGKLLAGYDFVSTLPESNDGN CCHHHHHHHHHCCEEECCCCCEEEEEEEECCCCCCCCHHHHHHHHCCHHHHHCCCCCCCC GRDSNASDPGDWITQQEDNSVGGDFYHCTSPDSLGNYNGAPSSWHGTQVAGIVGALTNNG CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC VGMAGTGWNTRVLPVRVLGKCGGYVSDVVIGMRWAAGLTVPNIAANPNPARILNLSLGTE CEEECCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCC GGCGEYQDAVDDVVAAGALVVAAAGNTNGHAVGAPGNCSGVMAVGGLRHSGTKVGFSDLG CCCCHHHHHHHHHHHCCEEEEEECCCCCCEEECCCCCCCCEEEECCCCCCCCCCCHHHCC SAVSISAPAGNCVNDFGPCLYPLLTTTNSGSQGPASSAYTDGTNDITVGTSFSAPLVSGV CEEEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHH AALMLAVQPTLTPDEIRGLIQGGSRRFPSTSAPVCTAPRFDVNGDPIDQIECDCTTTTCG HHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCC AGMLDARVAVRSAAAGLIADIVVNTATPRAGQDVSLTADVFRLISGRNLSSLSWSLVDGG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCC GIVSGSVSGCSANCVVSPTGAGSFTVAVTVTDDNNPPTQSTVSRRVTVVSASPNGGGGGG CEEECCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCCHHHHCCEEEEEEECCCCCCCCC GALGGPAYLLALALAVGAAWRLSAGRDA CCCCHHHHHHHHHHHHCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2187155; 12024217 [H]