Definition | Methylibium petroleiphilum PM1 chromosome, complete genome. |
---|---|
Accession | NC_008825 |
Length | 4,044,195 |
Click here to switch to the map view.
The map label for this gene is creC [H]
Identifier: 124265329
GI number: 124265329
Start: 141269
End: 142753
Strand: Direct
Name: creC [H]
Synonym: Mpe_A0136
Alternate gene names: 124265329
Gene position: 141269-142753 (Clockwise)
Preceding gene: 124265328
Following gene: 124265330
Centisome position: 3.49
GC content: 71.58
Gene sequence:
>1485_bases GTGACGAAGCGCAACCGCATCTTCATCGGCATCCTGCTCGCCTATGCGCTGGGCGTGGCGCTGCTGCTGTGGCGGCTGGT GGGCGACATCGACCCGCGCTACCGCGAGTCGGCCGAGGAATCGCTGGTGGAAACGGCGCACCTGATGGCGAGCTGGATCG AGAGTCGCTCCAGCGAGGAGGGCATCGCCATCGACGCGCTGCGCCCGGTGTTCCGCGCCCTCTACGCGCGCGAGTTCCGG GCCGACATCTTCGGCTTCGAGAAGACCCGCGTGGAGCTGCGCGCCACCGTGGTGGACCGCTCGGGGCTCGTGCTGTTCGA CTCCCTGGCCCGGCACGAGGGCGAGGACCACTCGGCCTGGCGCGACGTGCGGCTGGCGCTGGCCGGCGAGTACGGCGCCC GCACCTCGGCCGACGTGGACGGCGACCCCCACACCTCCGTGATGTACGTGGCCGCGCCCATCGTCGTGGGCGGCGAGATC GTCGGCGCGGTGTCGGTGGGCAAGCCTGTGCAGAGCTTCGGCCAGTTCGTGGAGAAGGCGCGCCGCCGCACGCTGCTGGT GGGGGCCACCTCGGTGGCCGCGGTGCTGCTGCTGGTGGTGATCGTCTCCATGTGGCTGGTGCGGCCCTTCGGCCTGGTGG CCGACGTGTGGCGCAGCGTGCGGGCCCAGAAGCGCGGCAGCTTCAGCCTGCGCCGGCTGGGCCGCCGCACCTGGGCCGCG GTGGGCGCCGCCTACGACGACATGCGCGACGCGCTGGCCGGCCGCAACTACGTGGCCGACTACGTGCAGACACTCACCCA CGAACTGAAGAGCCCGCTGTCGGCCATCCGCGGCGCGGCCGAACTGCTGAACGACGAACCCGCCATGCCCGAGGCCGACC GCCAGCGCTTCCTCGGCAACATCCAGCGCGAGACGCTGCGCATCCAGGAGCTGGTGGACCGCATGATGGAGCTGGCCGCG CTGGAATCACGCCGCCAGATCGAGCACCCCGAGGCCGTGGCCCTGCGCCCGCTGCTGCACGAGCTGGCCGCCAGCGCGCA GCCGGTGGCCGCGGCGCGGCGCATCGAGGTGGTGGTGCTGCCGAGCGGCGACGGCGACGAGGGCGAGGGTGATGCGGCGG CGGTGGAAGGCGACGCGCTGCTGCTGCGGCGAGCCATCGGCAACCTGCTCGACAACGCCATCGACTTCTCGCCCACCGGC GGCCGCGTGACGCTGCAACTCGCGATCAACCGCCAACGCGGCGATAGCGTCGACATCATCGTTCGCGACCAGGGCCCCGG CATCCCCGACTACGCCGACGACAAGGTGTTCGAGCGCTTCTACTCGCTGGCGCGGCCGCACTCGCAGAAGAAGAGCACGG GCCTGGGACTGGCGTTCGTGAAGGAGATTGCGGAGCTGCACCGGGGGCGGGTGAACCTGCGCAATGCGGCAGACGGGAAG GGGGCGGTGGCGGTGTTGACGTTGCCGCAGATGACGGGGCGCTGA
Upstream 100 bases:
>100_bases CCCACGCTGGAGCCCATCCGCACGCACCGTGGCAGCGGCTACGCGCTGGCCGAAGACCTGCCAGCCGAACTGCCGCGCGC ATAGATCGGCCAGCCAGCCA
Downstream 100 bases:
>100_bases CCCGACTTTCATGCACCTTGTCGATTTCAGGCCGCCCGCTTCGTCGTCAGTGCGTCCATCACCACTCCAAGGCAGCTCCC CATGAAATACCTCGGTCTCG
Product: sensory histidine kinase CreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTKRNRIFIGILLAYALGVALLLWRLVGDIDPRYRESAEESLVETAHLMASWIESRSSEEGIAIDALRPVFRALYAREFR ADIFGFEKTRVELRATVVDRSGLVLFDSLARHEGEDHSAWRDVRLALAGEYGARTSADVDGDPHTSVMYVAAPIVVGGEI VGAVSVGKPVQSFGQFVEKARRRTLLVGATSVAAVLLLVVIVSMWLVRPFGLVADVWRSVRAQKRGSFSLRRLGRRTWAA VGAAYDDMRDALAGRNYVADYVQTLTHELKSPLSAIRGAAELLNDEPAMPEADRQRFLGNIQRETLRIQELVDRMMELAA LESRRQIEHPEAVALRPLLHELAASAQPVAAARRIEVVVLPSGDGDEGEGDAAAVEGDALLLRRAIGNLLDNAIDFSPTG GRVTLQLAINRQRGDSVDIIVRDQGPGIPDYADDKVFERFYSLARPHSQKKSTGLGLAFVKEIAELHRGRVNLRNAADGK GAVAVLTLPQMTGR
Sequences:
>Translated_494_residues MTKRNRIFIGILLAYALGVALLLWRLVGDIDPRYRESAEESLVETAHLMASWIESRSSEEGIAIDALRPVFRALYAREFR ADIFGFEKTRVELRATVVDRSGLVLFDSLARHEGEDHSAWRDVRLALAGEYGARTSADVDGDPHTSVMYVAAPIVVGGEI VGAVSVGKPVQSFGQFVEKARRRTLLVGATSVAAVLLLVVIVSMWLVRPFGLVADVWRSVRAQKRGSFSLRRLGRRTWAA VGAAYDDMRDALAGRNYVADYVQTLTHELKSPLSAIRGAAELLNDEPAMPEADRQRFLGNIQRETLRIQELVDRMMELAA LESRRQIEHPEAVALRPLLHELAASAQPVAAARRIEVVVLPSGDGDEGEGDAAAVEGDALLLRRAIGNLLDNAIDFSPTG GRVTLQLAINRQRGDSVDIIVRDQGPGIPDYADDKVFERFYSLARPHSQKKSTGLGLAFVKEIAELHRGRVNLRNAADGK GAVAVLTLPQMTGR >Mature_493_residues TKRNRIFIGILLAYALGVALLLWRLVGDIDPRYRESAEESLVETAHLMASWIESRSSEEGIAIDALRPVFRALYAREFRA DIFGFEKTRVELRATVVDRSGLVLFDSLARHEGEDHSAWRDVRLALAGEYGARTSADVDGDPHTSVMYVAAPIVVGGEIV GAVSVGKPVQSFGQFVEKARRRTLLVGATSVAAVLLLVVIVSMWLVRPFGLVADVWRSVRAQKRGSFSLRRLGRRTWAAV GAAYDDMRDALAGRNYVADYVQTLTHELKSPLSAIRGAAELLNDEPAMPEADRQRFLGNIQRETLRIQELVDRMMELAAL ESRRQIEHPEAVALRPLLHELAASAQPVAAARRIEVVVLPSGDGDEGEGDAAAVEGDALLLRRAIGNLLDNAIDFSPTGG RVTLQLAINRQRGDSVDIIVRDQGPGIPDYADDKVFERFYSLARPHSQKKSTGLGLAFVKEIAELHRGRVNLRNAADGKG AVAVLTLPQMTGR
Specific function: Member of the two-component regulatory system CreC/CreB involved in catabolic regulation. CreC may function as a membrane- associated protein kinase that phosphorylates CreB in response to environmental signals. CreC can also phosphorylate PhoB [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790861, Length=487, Percent_Identity=38.8090349075975, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI1786600, Length=239, Percent_Identity=28.0334728033473, Blast_Score=92, Evalue=5e-20, Organism=Escherichia coli, GI1786783, Length=241, Percent_Identity=28.6307053941909, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI145693157, Length=230, Percent_Identity=24.7826086956522, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788393, Length=335, Percent_Identity=26.865671641791, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1788549, Length=224, Percent_Identity=26.3392857142857, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI48994928, Length=249, Percent_Identity=26.9076305220884, Blast_Score=72, Evalue=6e-14, Organism=Escherichia coli, GI1789403, Length=217, Percent_Identity=30.4147465437788, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790551, Length=256, Percent_Identity=28.515625, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1788279, Length=259, Percent_Identity=25.0965250965251, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI87082128, Length=233, Percent_Identity=25.3218884120172, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1788713, Length=242, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54178; Mature: 54047
Theoretical pI: Translated: 7.38; Mature: 7.38
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKRNRIFIGILLAYALGVALLLWRLVGDIDPRYRESAEESLVETAHLMASWIESRSSEE CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GIAIDALRPVFRALYAREFRADIFGFEKTRVELRATVVDRSGLVLFDSLARHEGEDHSAW CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCCHHH RDVRLALAGEYGARTSADVDGDPHTSVMYVAAPIVVGGEIVGAVSVGKPVQSFGQFVEKA HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH RRRTLLVGATSVAAVLLLVVIVSMWLVRPFGLVADVWRSVRAQKRGSFSLRRLGRRTWAA HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VGAAYDDMRDALAGRNYVADYVQTLTHELKSPLSAIRGAAELLNDEPAMPEADRQRFLGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IQRETLRIQELVDRMMELAALESRRQIEHPEAVALRPLLHELAASAQPVAAARRIEVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEEEEE PSGDGDEGEGDAAAVEGDALLLRRAIGNLLDNAIDFSPTGGRVTLQLAINRQRGDSVDII ECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEE VRDQGPGIPDYADDKVFERFYSLARPHSQKKSTGLGLAFVKEIAELHRGRVNLRNAADGK EECCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GAVAVLTLPQMTGR CCEEEEECCCCCCC >Mature Secondary Structure TKRNRIFIGILLAYALGVALLLWRLVGDIDPRYRESAEESLVETAHLMASWIESRSSEE CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GIAIDALRPVFRALYAREFRADIFGFEKTRVELRATVVDRSGLVLFDSLARHEGEDHSAW CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCCHHH RDVRLALAGEYGARTSADVDGDPHTSVMYVAAPIVVGGEIVGAVSVGKPVQSFGQFVEKA HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEHHHHHCCCHHHHHHHCCHHHHHHHHHHHHH RRRTLLVGATSVAAVLLLVVIVSMWLVRPFGLVADVWRSVRAQKRGSFSLRRLGRRTWAA HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH VGAAYDDMRDALAGRNYVADYVQTLTHELKSPLSAIRGAAELLNDEPAMPEADRQRFLGN HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IQRETLRIQELVDRMMELAALESRRQIEHPEAVALRPLLHELAASAQPVAAARRIEVVVL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEEEEE PSGDGDEGEGDAAAVEGDALLLRRAIGNLLDNAIDFSPTGGRVTLQLAINRQRGDSVDII ECCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEE VRDQGPGIPDYADDKVFERFYSLARPHSQKKSTGLGLAFVKEIAELHRGRVNLRNAADGK EECCCCCCCCCCCHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC GAVAVLTLPQMTGR CCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3531171; 7610040; 9278503; 2835585; 2228961 [H]