Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022257
Identifier: 124022257
GI number: 124022257
Start: 529840
End: 530838
Strand: Direct
Name: 124022257
Synonym: P9303_05471
Alternate gene names: NA
Gene position: 529840-530838 (Clockwise)
Preceding gene: 124022254
Following gene: 124022258
Centisome position: 19.75
GC content: 59.16
Gene sequence:
>999_bases ATGGGGATTCACTCCCTGCCGCTGACTGTGCTGCTGCTGGCTGCCGTCAGTCAGGCTGCGCCTCTTAATTCTGCGACTGA CCCCCTTGCTCCCGCTAGGGAGCCCATGGCTGAACTGGTCTATCGGCAAGTGTTGCTCGATGGGGCGATACCAGAGCTCA ACACAGCTTGTGCTGACGCAGCCCTGTTTGGCTTGAACTTGCGTCTGCAGGAACTTCGTAATCGCCTGATCGACATTGCT CCTGCACCTCAACCCTTTGAGGTTGTGATCGCCAATGCTGAAGCGCTGATGGTCTGCAAGGCTCCAGCTAGCACGCAGAC GGTGCTCAGTCGTATCAGCCCAGCGCCAGGCAGTCAGCGCCGCGCTTGGTTGCTGCTCTCCTGGCAGGCGGCCAACGCAT CTTTGGATCATGCCCAGGCGGCCCTTGCTCTGCGACGCCTGGCAAATGGCGATCTCACGGTCTTGAATTTTGAGCAGCTC ACCGTTGGCTATGGAGCTGATGGCCTGCCGCTGACCCGGGCTGCCCTTGATCTCTTGGTGGAACATGAGCTTGCCCTGGA TCGGTCGGATGAGGCGGTCATGGTGCTGTTGGCTGGCCGTGAGCGTGGTGCATTGGGGGCCCGCCGTCTTGCTCTGGCCG CTGAGTTGCTTCAGGGTCTAGGCAACGATCAGCACTCAACACTGTTGGAATCAGCCCTTGACCAGGCGGCTGCAGATCAA GCTTGGGGGCTGGCAGAAGACTTGCTGAGATTGCAATTGAAGCTCGATTTAGCAGCGGGTGGTGACGGCTTAAGGCCCCG ACAACGTCTAGAGCGTCTCGCTAATCGCCTCGATGACCGCTACACCCTGTGGGAGTTGGTTCGGGGTGATCTGGATCAGC AGGAGGCTGCAACTCTTCTAGAGCAGGAGCTGCGCTCGCCCCGTCAGCCTGGCGGCCATGCTGCTGTTGAAGCGCATCAA AGTGCGCCTCCTGTTTCAGTTCCATCAGAATTCAAATGA
Upstream 100 bases:
>100_bases AGGAACAAGCAGGGACGGGGAAGACCCCTAGGTTTGAGTAGGCCGGATCTCGTCAGAGGAATCCGTTGCCTCTTCCATCT TTGTTGAACGACTCAACTCC
Downstream 100 bases:
>100_bases CGCCAGATCACGGCCCTCTGCTCTATGAGGGCAAGGCCAAAAGAGTATTCGCTGCGGATCAGCCCGATTGTGTGTTGGTG GAGTTCAAGAATGACGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MGIHSLPLTVLLLAAVSQAAPLNSATDPLAPAREPMAELVYRQVLLDGAIPELNTACADAALFGLNLRLQELRNRLIDIA PAPQPFEVVIANAEALMVCKAPASTQTVLSRISPAPGSQRRAWLLLSWQAANASLDHAQAALALRRLANGDLTVLNFEQL TVGYGADGLPLTRAALDLLVEHELALDRSDEAVMVLLAGRERGALGARRLALAAELLQGLGNDQHSTLLESALDQAAADQ AWGLAEDLLRLQLKLDLAAGGDGLRPRQRLERLANRLDDRYTLWELVRGDLDQQEAATLLEQELRSPRQPGGHAAVEAHQ SAPPVSVPSEFK
Sequences:
>Translated_332_residues MGIHSLPLTVLLLAAVSQAAPLNSATDPLAPAREPMAELVYRQVLLDGAIPELNTACADAALFGLNLRLQELRNRLIDIA PAPQPFEVVIANAEALMVCKAPASTQTVLSRISPAPGSQRRAWLLLSWQAANASLDHAQAALALRRLANGDLTVLNFEQL TVGYGADGLPLTRAALDLLVEHELALDRSDEAVMVLLAGRERGALGARRLALAAELLQGLGNDQHSTLLESALDQAAADQ AWGLAEDLLRLQLKLDLAAGGDGLRPRQRLERLANRLDDRYTLWELVRGDLDQQEAATLLEQELRSPRQPGGHAAVEAHQ SAPPVSVPSEFK >Mature_331_residues GIHSLPLTVLLLAAVSQAAPLNSATDPLAPAREPMAELVYRQVLLDGAIPELNTACADAALFGLNLRLQELRNRLIDIAP APQPFEVVIANAEALMVCKAPASTQTVLSRISPAPGSQRRAWLLLSWQAANASLDHAQAALALRRLANGDLTVLNFEQLT VGYGADGLPLTRAALDLLVEHELALDRSDEAVMVLLAGRERGALGARRLALAAELLQGLGNDQHSTLLESALDQAAADQA WGLAEDLLRLQLKLDLAAGGDGLRPRQRLERLANRLDDRYTLWELVRGDLDQQEAATLLEQELRSPRQPGGHAAVEAHQS APPVSVPSEFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35636; Mature: 35505
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIHSLPLTVLLLAAVSQAAPLNSATDPLAPAREPMAELVYRQVLLDGAIPELNTACADA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALFGLNLRLQELRNRLIDIAPAPQPFEVVIANAEALMVCKAPASTQTVLSRISPAPGSQR HHHHCCHHHHHHHHHHEECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCC RAWLLLSWQAANASLDHAQAALALRRLANGDLTVLNFEQLTVGYGADGLPLTRAALDLLV CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHEEECCCCCCCHHHHHHHHHHH EHELALDRSDEAVMVLLAGRERGALGARRLALAAELLQGLGNDQHSTLLESALDQAAADQ HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AWGLAEDLLRLQLKLDLAAGGDGLRPRQRLERLANRLDDRYTLWELVRGDLDQQEAATLL HCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH EQELRSPRQPGGHAAVEAHQSAPPVSVPSEFK HHHHHCCCCCCCCHHHECCCCCCCCCCCCCCC >Mature Secondary Structure GIHSLPLTVLLLAAVSQAAPLNSATDPLAPAREPMAELVYRQVLLDGAIPELNTACADA CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHH ALFGLNLRLQELRNRLIDIAPAPQPFEVVIANAEALMVCKAPASTQTVLSRISPAPGSQR HHHHCCHHHHHHHHHHEECCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCCCCCCC RAWLLLSWQAANASLDHAQAALALRRLANGDLTVLNFEQLTVGYGADGLPLTRAALDLLV CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEHHHEEECCCCCCCHHHHHHHHHHH EHELALDRSDEAVMVLLAGRERGALGARRLALAAELLQGLGNDQHSTLLESALDQAAADQ HHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH AWGLAEDLLRLQLKLDLAAGGDGLRPRQRLERLANRLDDRYTLWELVRGDLDQQEAATLL HCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHH EQELRSPRQPGGHAAVEAHQSAPPVSVPSEFK HHHHHCCCCCCCCHHHECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA