Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022088
Identifier: 124022088
GI number: 124022088
Start: 381156
End: 382490
Strand: Reverse
Name: 124022088
Synonym: P9303_03781
Alternate gene names: NA
Gene position: 382490-381156 (Counterclockwise)
Preceding gene: 124022089
Following gene: 124022082
Centisome position: 14.26
GC content: 41.5
Gene sequence:
>1335_bases GTGAGAGAATTTGATTTAAAAAAGATCTTCATGATGATAGTCAAGACTGGAGGAATGATCCTGCTCGCAGCAGCCTTCGC TTACATCCCTAACTCAAGAACAATGGCCAAAGGGAATACACCTCCCTTAATATTTGCTCCAGGGTATGGGATGAGTGCTC TTCGCATACAGGTCAATGAAAGAGATGGAAGTTCTGAAAAGTTTAATTTTCTTTTACCTGCATTGGTACAAGAAAAAACC CTGCCACCACCAGCAAAAAATGCTATTGATTATGCAGTTCTTAGCGGCCTAAAGAAGAAAGATAAAGTAAAGGTACGAGA CTGGCTGAAACTCAATATCGAAAGTGATGGACAAGTAAGCAACAAAAAAATGGTCAGTGTTAAACCAATTTCGGTTGGGA TTGACATTGAATCCGAGTGTCCTCGCTACTCGACAATGGCAAGAAAATTACAGACCTATGGCTGGATATCAAATCGAAAT CTATTTTGTCTTCCTTATGACTATAGATACCCACCAGGAGCTAATAGTTTCCGGCCAAATCTAATCAAGTTGGTTGAGAG AGTCTATAAACACAGCAATGGTAAAAAAGTCGTTCTTGTTTGTCATAGTCAAGGTTGCTTGATGGCATACCATGCATTAC GCACCATTGAAAAGGATTGGATAGAAAATCATATACAGCTCTTCTTTGCATTTGCAGGTCAGTTCTCGGGCTGCAGTGAT TGCCTCCGTTGGGCATTTCAGAAACAATGGAGCTGGGATGGGGCAAGCGCATCGTCATCACCCTCGGATATGAGCTGGGC TGGCGAACTTGGCTTAGATCTACAACCAAGTGTATACGCAAACAATGTACTCTATAGAAACGGGACTAAAGAATATCTTG CAGAGAATACACGTCAATTACTCAAAGATGCAGGGGCGTTATCTATGTTACGTCCAACAGACTACTATTCTTTAAGCAGT CAAAATTGGTTTCGCAAAGGGGAGATAGATAATCTTCCTCTACTTATCAGGAGTCGTTTTATTTATGGTAATGGGATACC AACAACGATAGGGTTTGATTACCAATCCATTTCCCCTCATGATGGCCAATGCGTAAAACCAAGTTGTGCAGGATTTTTAA ACAGTAAAAATCCTAATCATATACAAGCAGATGGTGACGGTGGTGATAGTACATGGATGAATGAAGCCCCTATGAGATGG ACGAGACATCCAGCATGCGAGATGCGTGCATTCCCTAAGGTTGGCCACATGGAGATCTTTGAAAATGACGAAGCAATTGC TTATCTAGCCAAATCTACAATGGAGTTGGCTGCTATTGACCCATGCTCAGATTAA
Upstream 100 bases:
>100_bases TTGATAGATGATTGGATGACATCTTCTCTTGCATGAATCCATCTATAGGTATATCTACGACCTGCCAAAGCAGGAGTGAT GGCGACAATTAGAATTCGAG
Downstream 100 bases:
>100_bases AATGATTTGCGCAATACTATGAATCGGATTAAGCAAAGATTGGATCTACTCTTCATCAGGATTAAAAAAATTAAATAGAC CGCCTAGGCTAAATTATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 444; Mature: 444
Protein sequence:
>444_residues MREFDLKKIFMMIVKTGGMILLAAAFAYIPNSRTMAKGNTPPLIFAPGYGMSALRIQVNERDGSSEKFNFLLPALVQEKT LPPPAKNAIDYAVLSGLKKKDKVKVRDWLKLNIESDGQVSNKKMVSVKPISVGIDIESECPRYSTMARKLQTYGWISNRN LFCLPYDYRYPPGANSFRPNLIKLVERVYKHSNGKKVVLVCHSQGCLMAYHALRTIEKDWIENHIQLFFAFAGQFSGCSD CLRWAFQKQWSWDGASASSSPSDMSWAGELGLDLQPSVYANNVLYRNGTKEYLAENTRQLLKDAGALSMLRPTDYYSLSS QNWFRKGEIDNLPLLIRSRFIYGNGIPTTIGFDYQSISPHDGQCVKPSCAGFLNSKNPNHIQADGDGGDSTWMNEAPMRW TRHPACEMRAFPKVGHMEIFENDEAIAYLAKSTMELAAIDPCSD
Sequences:
>Translated_444_residues MREFDLKKIFMMIVKTGGMILLAAAFAYIPNSRTMAKGNTPPLIFAPGYGMSALRIQVNERDGSSEKFNFLLPALVQEKT LPPPAKNAIDYAVLSGLKKKDKVKVRDWLKLNIESDGQVSNKKMVSVKPISVGIDIESECPRYSTMARKLQTYGWISNRN LFCLPYDYRYPPGANSFRPNLIKLVERVYKHSNGKKVVLVCHSQGCLMAYHALRTIEKDWIENHIQLFFAFAGQFSGCSD CLRWAFQKQWSWDGASASSSPSDMSWAGELGLDLQPSVYANNVLYRNGTKEYLAENTRQLLKDAGALSMLRPTDYYSLSS QNWFRKGEIDNLPLLIRSRFIYGNGIPTTIGFDYQSISPHDGQCVKPSCAGFLNSKNPNHIQADGDGGDSTWMNEAPMRW TRHPACEMRAFPKVGHMEIFENDEAIAYLAKSTMELAAIDPCSD >Mature_444_residues MREFDLKKIFMMIVKTGGMILLAAAFAYIPNSRTMAKGNTPPLIFAPGYGMSALRIQVNERDGSSEKFNFLLPALVQEKT LPPPAKNAIDYAVLSGLKKKDKVKVRDWLKLNIESDGQVSNKKMVSVKPISVGIDIESECPRYSTMARKLQTYGWISNRN LFCLPYDYRYPPGANSFRPNLIKLVERVYKHSNGKKVVLVCHSQGCLMAYHALRTIEKDWIENHIQLFFAFAGQFSGCSD CLRWAFQKQWSWDGASASSSPSDMSWAGELGLDLQPSVYANNVLYRNGTKEYLAENTRQLLKDAGALSMLRPTDYYSLSS QNWFRKGEIDNLPLLIRSRFIYGNGIPTTIGFDYQSISPHDGQCVKPSCAGFLNSKNPNHIQADGDGGDSTWMNEAPMRW TRHPACEMRAFPKVGHMEIFENDEAIAYLAKSTMELAAIDPCSD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49944; Mature: 49944
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREFDLKKIFMMIVKTGGMILLAAAFAYIPNSRTMAKGNTPPLIFAPGYGMSALRIQVNE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEEEEEEC RDGSSEKFNFLLPALVQEKTLPPPAKNAIDYAVLSGLKKKDKVKVRDWLKLNIESDGQVS CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCC NKKMVSVKPISVGIDIESECPRYSTMARKLQTYGWISNRNLFCLPYDYRYPPGANSFRPN CCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCEECCCEEEEEECCCCCCCCCCCCCCH LIKLVERVYKHSNGKKVVLVCHSQGCLMAYHALRTIEKDWIENHIQLFFAFAGQFSGCSD HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH CLRWAFQKQWSWDGASASSSPSDMSWAGELGLDLQPSVYANNVLYRNGTKEYLAENTRQL HHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHCCCEEEECCCHHHHHHHHHHH LKDAGALSMLRPTDYYSLSSQNWFRKGEIDNLPLLIRSRFIYGNGIPTTIGFDYQSISPH HHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCC DGQCVKPSCAGFLNSKNPNHIQADGDGGDSTWMNEAPMRWTRHPACEMRAFPKVGHMEIF CCCEECHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE ENDEAIAYLAKSTMELAAIDPCSD CCCCHHHHHHHHHHHEEECCCCCC >Mature Secondary Structure MREFDLKKIFMMIVKTGGMILLAAAFAYIPNSRTMAKGNTPPLIFAPGYGMSALRIQVNE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEECCCCCCCEEEECCCCCEEEEEEEEC RDGSSEKFNFLLPALVQEKTLPPPAKNAIDYAVLSGLKKKDKVKVRDWLKLNIESDGQVS CCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCC NKKMVSVKPISVGIDIESECPRYSTMARKLQTYGWISNRNLFCLPYDYRYPPGANSFRPN CCEEEEEEEEEEEEECCCCCCHHHHHHHHHHHHCEECCCEEEEEECCCCCCCCCCCCCCH LIKLVERVYKHSNGKKVVLVCHSQGCLMAYHALRTIEKDWIENHIQLFFAFAGQFSGCSD HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH CLRWAFQKQWSWDGASASSSPSDMSWAGELGLDLQPSVYANNVLYRNGTKEYLAENTRQL HHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHCCCEEEECCCHHHHHHHHHHH LKDAGALSMLRPTDYYSLSSQNWFRKGEIDNLPLLIRSRFIYGNGIPTTIGFDYQSISPH HHHCCCEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCC DGQCVKPSCAGFLNSKNPNHIQADGDGGDSTWMNEAPMRWTRHPACEMRAFPKVGHMEIF CCCEECHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEE ENDEAIAYLAKSTMELAAIDPCSD CCCCHHHHHHHHHHHEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA