Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022082
Identifier: 124022082
GI number: 124022082
Start: 374041
End: 374685
Strand: Reverse
Name: 124022082
Synonym: P9303_03721
Alternate gene names: NA
Gene position: 374685-374041 (Counterclockwise)
Preceding gene: 124022088
Following gene: 124022077
Centisome position: 13.97
GC content: 43.57
Gene sequence:
>645_bases ATGGTCCATCCAATCTCAGCCCAAAAAATCCTAGCTTTCAGAAAGCGTCAACAGGACACTGGCTGGGGTTATGCATTGTC ATCTGCTTGGGTTCCTCTTGTCCAGATATATTACGCCATATCCAGAAGATCTATCACCCCAATAATTTATGGGATTGCAG GCACAGCACTGATATGCATAATCATTGGAGCATGTATGAATACTTTCGGAGTCTCAGGCCAAGGGCCTACCTCAGAACAA TGGATAGTAGTCTTCTATTTGACTACATATGTTGCTGGACCATTCCTGTACAAATCGGGAATCCGTCAAGCCAAACGAGA AGCAATGTCAATTCTCATGCAAAATGGAATTACTAAAGGAAAGTTGCGTAGACCATGGCATCCATCAATGCTTCCTCTAA ATCTAAAAGTAAAAGACGGGGTTCACGGCGTCGCCATCGCCAAAACCAAAATACCAAAGAATGAGAAAGCAGAAACGCTT TTACCAGAGCGGTCGGAAAAATATTTGGTGCGATGGTGGCTCTTTGCAACTGGAGCCAAGCGGCCTTTTCAAAAGCTGGA AGAGCTAAAGCGGCTATATGAACAAGGCTTGATCAGCAAAGAAGAATATAAGAGCTCGAAAGAAAGGGCACTAAGAATCA AATAG
Upstream 100 bases:
>100_bases GATTCAGCATCTACTGCCTGCTCTACTATTCTTGACTTGCTTCACTATGTAGAAAGACAATAAGGATATTGTGCTATTAA ATAGTTCTTGATCAGGCTAA
Downstream 100 bases:
>100_bases GTCTTATTAGAAAATTATATCCAAATAAATCGCCAAGAATTGATGATTTTCTTTAATAAGCCTAACTCGACTGTGAATAA TTTGAATTTTCTTATTATAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MVHPISAQKILAFRKRQQDTGWGYALSSAWVPLVQIYYAISRRSITPIIYGIAGTALICIIIGACMNTFGVSGQGPTSEQ WIVVFYLTTYVAGPFLYKSGIRQAKREAMSILMQNGITKGKLRRPWHPSMLPLNLKVKDGVHGVAIAKTKIPKNEKAETL LPERSEKYLVRWWLFATGAKRPFQKLEELKRLYEQGLISKEEYKSSKERALRIK
Sequences:
>Translated_214_residues MVHPISAQKILAFRKRQQDTGWGYALSSAWVPLVQIYYAISRRSITPIIYGIAGTALICIIIGACMNTFGVSGQGPTSEQ WIVVFYLTTYVAGPFLYKSGIRQAKREAMSILMQNGITKGKLRRPWHPSMLPLNLKVKDGVHGVAIAKTKIPKNEKAETL LPERSEKYLVRWWLFATGAKRPFQKLEELKRLYEQGLISKEEYKSSKERALRIK >Mature_214_residues MVHPISAQKILAFRKRQQDTGWGYALSSAWVPLVQIYYAISRRSITPIIYGIAGTALICIIIGACMNTFGVSGQGPTSEQ WIVVFYLTTYVAGPFLYKSGIRQAKREAMSILMQNGITKGKLRRPWHPSMLPLNLKVKDGVHGVAIAKTKIPKNEKAETL LPERSEKYLVRWWLFATGAKRPFQKLEELKRLYEQGLISKEEYKSSKERALRIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24329; Mature: 24329
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHPISAQKILAFRKRQQDTGWGYALSSAWVPLVQIYYAISRRSITPIIYGIAGTALICI CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIGACMNTFGVSGQGPTSEQWIVVFYLTTYVAGPFLYKSGIRQAKREAMSILMQNGITKG HHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLRRPWHPSMLPLNLKVKDGVHGVAIAKTKIPKNEKAETLLPERSEKYLVRWWLFATGAK CCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC RPFQKLEELKRLYEQGLISKEEYKSSKERALRIK CHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCC >Mature Secondary Structure MVHPISAQKILAFRKRQQDTGWGYALSSAWVPLVQIYYAISRRSITPIIYGIAGTALICI CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH IIGACMNTFGVSGQGPTSEQWIVVFYLTTYVAGPFLYKSGIRQAKREAMSILMQNGITKG HHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLRRPWHPSMLPLNLKVKDGVHGVAIAKTKIPKNEKAETLLPERSEKYLVRWWLFATGAK CCCCCCCCCEEEEEEEECCCCCEEEEEECCCCCCCCHHHCCCCCCHHHHHHHHHHHCCCC RPFQKLEELKRLYEQGLISKEEYKSSKERALRIK CHHHHHHHHHHHHHHCCCCHHHHHHHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA