Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
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Accession | NC_008820 |
Length | 2,682,675 |
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The map label for this gene is 124022089
Identifier: 124022089
GI number: 124022089
Start: 382882
End: 383490
Strand: Reverse
Name: 124022089
Synonym: P9303_03791
Alternate gene names: NA
Gene position: 383490-382882 (Counterclockwise)
Preceding gene: 124022090
Following gene: 124022088
Centisome position: 14.3
GC content: 46.96
Gene sequence:
>609_bases ATGCGGAAGATTCAGTCGTCAGTCCTGCGATCTCTACTACTGGGGATACTGATCCCTATTGCCGCTTCTCTTTACCTGAT CCTGCCGTTGGCTGCTGATGCCACTTATCCAAGCATGCTGGAAAACGATCAGGGTGGAGCTGATCGATCGATGTTAGAGA CTAGGAAGAACCTAGATGCTCTCAGCAAAAAGTATCCATTTCTAGACACAGTTGAAGATGGCAAACCCTTAACAGCTGAA TTTGTAAAGTATGATCTTGCCGGCTATGATTTAAGCGAGGCTGATCTACGAGGATCTACATTCAGTGTAACGACTCTGAA GAATGCCAATCTCCACGGTACAAACTTAGAGGATGTATTGGCATACGCCACTCGCTTTGACAATGCCGACCTCTCAGAAA GTATCCTACGCAACGCGAATCTAAGGAAAAGTGAATTCGCTGGTGCTTTGATTGATGGGGCTGACTTCACTAACGCCTTG CTTGACAGGCAAGAACAGAAAGCGCTCTGTGCAAGAGCTACAGGCAAGAATTCAAAAACTGGCGTGGATACATATACCAG CCTTGATTGCTCTGGAATCTCAGAACGGGTTATTCCGGCCGGCAGATAG
Upstream 100 bases:
>100_bases AACCGTAGATATATTACGTTAAACTGGCAACTTGAATACAGCTATTATTTGCTTCCAATGAGATATTAATAGATGACAGA TAGTTCTACGATGCAAGCCA
Downstream 100 bases:
>100_bases ATGGATCATTCGCTAAATCATCAAGCAAACAAGTAGCCTTGCCAAAGAGGCTGAATTGATGAAACTTAAAATAAAAGTCA TAGGTCACATTGATCAAAGA
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; Secreted Pentapeptide Repeats Protein; RfrA Pentapeptide Repeat-Containing Protein
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MRKIQSSVLRSLLLGILIPIAASLYLILPLAADATYPSMLENDQGGADRSMLETRKNLDALSKKYPFLDTVEDGKPLTAE FVKYDLAGYDLSEADLRGSTFSVTTLKNANLHGTNLEDVLAYATRFDNADLSESILRNANLRKSEFAGALIDGADFTNAL LDRQEQKALCARATGKNSKTGVDTYTSLDCSGISERVIPAGR
Sequences:
>Translated_202_residues MRKIQSSVLRSLLLGILIPIAASLYLILPLAADATYPSMLENDQGGADRSMLETRKNLDALSKKYPFLDTVEDGKPLTAE FVKYDLAGYDLSEADLRGSTFSVTTLKNANLHGTNLEDVLAYATRFDNADLSESILRNANLRKSEFAGALIDGADFTNAL LDRQEQKALCARATGKNSKTGVDTYTSLDCSGISERVIPAGR >Mature_202_residues MRKIQSSVLRSLLLGILIPIAASLYLILPLAADATYPSMLENDQGGADRSMLETRKNLDALSKKYPFLDTVEDGKPLTAE FVKYDLAGYDLSEADLRGSTFSVTTLKNANLHGTNLEDVLAYATRFDNADLSESILRNANLRKSEFAGALIDGADFTNAL LDRQEQKALCARATGKNSKTGVDTYTSLDCSGISERVIPAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21928; Mature: 21928
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIQSSVLRSLLLGILIPIAASLYLILPLAADATYPSMLENDQGGADRSMLETRKNLDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHH LSKKYPFLDTVEDGKPLTAEFVKYDLAGYDLSEADLRGSTFSVTTLKNANLHGTNLEDVL HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHHH AYATRFDNADLSESILRNANLRKSEFAGALIDGADFTNALLDRQEQKALCARATGKNSKT HHHHHCCCCCHHHHHHHCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GVDTYTSLDCSGISERVIPAGR CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRKIQSSVLRSLLLGILIPIAASLYLILPLAADATYPSMLENDQGGADRSMLETRKNLDA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHH LSKKYPFLDTVEDGKPLTAEFVKYDLAGYDLSEADLRGSTFSVTTLKNANLHGTNLEDVL HHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCCCCCHHHHH AYATRFDNADLSESILRNANLRKSEFAGALIDGADFTNALLDRQEQKALCARATGKNSKT HHHHHCCCCCHHHHHHHCCCCCHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC GVDTYTSLDCSGISERVIPAGR CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA