Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
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Accession | NC_008819 |
Length | 1,864,731 |
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The map label for this gene is 124025574
Identifier: 124025574
GI number: 124025574
Start: 801144
End: 802583
Strand: Direct
Name: 124025574
Synonym: NATL1_08671
Alternate gene names: NA
Gene position: 801144-802583 (Clockwise)
Preceding gene: 124025564
Following gene: 124025579
Centisome position: 42.96
GC content: 26.81
Gene sequence:
>1440_bases ATGAGTTATCAAATTAATTTAAGAATCCATGGTCATAGTTGTTTGGAACTGAGAACTACAACAGACATAATATTATTTGA TCCTTGGCTGAAAGGCTCAGCATACTGGAGATCGTGGTGGAATTTCCCAGAACAAAAAAATATAGAAGAATTAATTAGTG AAATATCAAATGTAGAAAATATTTATGTATATATTACTCATCTTCATTGGGATCACTTTCATGGACCTAGCTTGAGAATA CTTTACAGAGAAATTCCCAAGATCAAATTTCTGATACCAAAAGTGCCCGAAACAAGATTAAAAAATGATTTATTAAAAAT TTTGGGTAACAAGATTAATATCATTGAAATTAATCATGGACAACTATATATCGTTTCCCCTAATATAAAAATTCAACCAT TTTTAGCCGGACCAATACTTACAGATTCAGCTGTATTAATAAATTGTGATAATAATTATATTTTGAATTTAAATGACAGT AAGCAGCAAAAATTAATGATTAATCAAATTAAATCTAATTTTAGGGAAGGTAAATTAAAAGTAATGCTTAGAAGCCATGC TTCAGCAAACTCACGAGTATGCCAAAGGAATCGTGACGGAGGAGTTAAATTAAAAGCTGATAAAAAGATAGAAGAATATT CTAAAGAATTTTTATTAACGGCAAGGATTTTTAAGCCTGAGGTTGCTATTCCATTTGCATCAAATATGTGTTATTTACAT AAGGATACATATAAATATAATTTCTATTCTAATACTTCGGATAAGTTATTAAAATTCTACAGAGAGAACATTGAATACAG TGACATAAATCTTAAACTAATTCTTCCTGGTGAGAAATTAAACGTTAATGATTTAAAAATTTCAGAGAATAAAACTTCAA GAAATCAATTGTTTTCAGATAGGTATCAAGTTTTAAAATCCTATAGAGAAAAATATAAAAAGAAGATAGAAAGATCAGAG TTTATTCAAGGAAAGGGATCTTTTTCTGAGATAATTTTCAAGAAATATTTCTATAATGTATTTAAATATACTCCATTTAT AATAAGTAAACTTGTTCATGGTAAGGTGGCATTTATTGAAAAGAAAGATCATATTTATAATAAATTTTTTATTGTTGATA TGCGGCGAAAGAAGATATTTTTAAATGCAATTAGTTATGATGATTGTGAAACTTTAATAATAGTTCGCCCTGGAGTATTA AATAGTTGTCTAATGCAAAATAACCTTAATTCTTTAGGAATATCTAAATTATTAGAAGTTAGATCATCTTCAATCCGTCA ATATAATTTGTTTTTCGCGATATGTGTTGCATCTGAAATAGGTTCTTATCCATTTATCTCGATCAAACAGAGTATAAGAA GTTTTAAAATATGGATTAGAAGATTTAGAGAGATAATTGATTATATTCTTATTATTTTAAGGTTTAATAAGTTAATATAA
Upstream 100 bases:
>100_bases TGATAATTAAAAAATAAGTGTTGTTGAAATATCAGTAATACAAAATCAATTTTTACTTCCCGAAATTATATAATGACACT ATTATTCTAGTAAAGTAGAG
Downstream 100 bases:
>100_bases ACAAATCTATTCTAAATTTATTCTTTTCTTTTAGCAGGTGGAATTAGTTTTTATTTTATTATATATATATTTTTTCTTCC ACCTCTACTTAGTTCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: Zn-Dependent Hydrolase Of Beta-Lactamase Fold
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRI LYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDS KQQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSE FIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVL NSCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI
Sequences:
>Translated_479_residues MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRI LYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDS KQQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSE FIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVL NSCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI >Mature_478_residues SYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVENIYVYITHLHWDHFHGPSLRIL YREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHGQLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSK QQKLMINQIKSNFREGKLKVMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLHK DTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSDRYQVLKSYREKYKKKIERSEF IQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIEKKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLN SCLMQNNLNSLGISKLLEVRSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56646; Mature: 56515
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVEN CCEEEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCE IYVYITHLHWDHFHGPSLRILYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHG EEEEEEEEEECCCCCCCEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECC QLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSKQQKLMINQIKSNFREGKLK EEEEECCCEEEEEEEECCEECCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCEEE VMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH EEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCEECEECCCEEEEE KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSD CCCEEEEEECCCHHHHHHHHHHCCCEECEEEEEEECCCCCCCCCEEECCCCCHHHHHHHH RYQVLKSYREKYKKKIERSEFIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE KKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLNSCLMQNNLNSLGISKLLEV CCCCCEEEEEEEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHH RSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI HHHCCCEEHHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYQINLRIHGHSCLELRTTTDIILFDPWLKGSAYWRSWWNFPEQKNIEELISEISNVEN CEEEEEEECCCCEEEEEECCEEEEECCCCCCCHHHHHHCCCCCCCCHHHHHHHHCCCCE IYVYITHLHWDHFHGPSLRILYREIPKIKFLIPKVPETRLKNDLLKILGNKINIIEINHG EEEEEEEEEECCCCCCCEEEHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECC QLYIVSPNIKIQPFLAGPILTDSAVLINCDNNYILNLNDSKQQKLMINQIKSNFREGKLK EEEEECCCEEEEEEEECCEECCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHHCCCEEE VMLRSHASANSRVCQRNRDGGVKLKADKKIEEYSKEFLLTARIFKPEVAIPFASNMCYLH EEEECCCCCCHHHHHCCCCCCEEEEECCHHHHHHHHHEEEEEECCCCEECEECCCEEEEE KDTYKYNFYSNTSDKLLKFYRENIEYSDINLKLILPGEKLNVNDLKISENKTSRNQLFSD CCCEEEEEECCCHHHHHHHHHHCCCEECEEEEEEECCCCCCCCCEEECCCCCHHHHHHHH RYQVLKSYREKYKKKIERSEFIQGKGSFSEIIFKKYFYNVFKYTPFIISKLVHGKVAFIE HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE KKDHIYNKFFIVDMRRKKIFLNAISYDDCETLIIVRPGVLNSCLMQNNLNSLGISKLLEV CCCCCEEEEEEEEEECCEEEEEEECCCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHH RSSSIRQYNLFFAICVASEIGSYPFISIKQSIRSFKIWIRRFREIIDYILIILRFNKLI HHHCCCEEHHHEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA