| Definition | Prochlorococcus marinus str. NATL1A, complete genome. |
|---|---|
| Accession | NC_008819 |
| Length | 1,864,731 |
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The map label for this gene is 124025517
Identifier: 124025517
GI number: 124025517
Start: 747403
End: 747978
Strand: Direct
Name: 124025517
Synonym: NATL1_08101
Alternate gene names: NA
Gene position: 747403-747978 (Clockwise)
Preceding gene: 124025516
Following gene: 124025518
Centisome position: 40.08
GC content: 37.5
Gene sequence:
>576_bases TTGATTCCTGATTCACCCCCAACTGAAATTGCAATAACTCCTCTTATACAGGGTTCTGAATTTTCAGATTGGAAATCTCT GAATGACACAATTATGGGCGGTTCAAGTCGTGCAAGTTGTCGTTCTTCAGATAAAGGTTTATTTCTTGAGGGTAACCTAG TTGAAGAAGGTGGAGGCTTTGTTAGTTGTCGATCTCCGATTTTTGATAAGCCATTTAATCTATCCAAATATTCTGGATTA ATTATTGATGTTGAAGGAGAAGGGAGAACATTGAAATTTGCGATCGCTTGTGAAAAGAAACCTTTATCATTATCAAATCT TTTAAAAGGTGATATCCGCTGGGTTGCCTCAATACCTACAAATAAGAAAGGAGTTAGTAGTATCAAAGTACCTTTCAAAA ATTTGGAACCTGCTCGACGAGCAAAGCCTGTTCGACTACCTCTTAGATTTGATCCTACTTGTGTCAACAGGTTTCAATTG CTTTATTCGAAATTCGGACAACCCGGCAAAATAAATTCAGGTTTTTCCCCTGGCCCTATTAAAGTATTCATTAAGTCAAT AAGTGCATACCTCTGA
Upstream 100 bases:
>100_bases AATTAGTTGCACCAAATTCTGAAATTATTGTTTTGGCTGATAAAGATGCTTACCCATCTTTTTAGTTAGATTATTGTATT AGTAGAGAAGTACTTTTTAA
Downstream 100 bases:
>100_bases CTCAAAAGACAGCTTGATAGCTGAAGTAGCCAAGGCTGCAGATCTTTGTATGAAGCCCTATGTGCATTCTGTCTTTTTAG AAAATCAATTATTTGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MIPDSPPTEIAITPLIQGSEFSDWKSLNDTIMGGSSRASCRSSDKGLFLEGNLVEEGGGFVSCRSPIFDKPFNLSKYSGL IIDVEGEGRTLKFAIACEKKPLSLSNLLKGDIRWVASIPTNKKGVSSIKVPFKNLEPARRAKPVRLPLRFDPTCVNRFQL LYSKFGQPGKINSGFSPGPIKVFIKSISAYL
Sequences:
>Translated_191_residues MIPDSPPTEIAITPLIQGSEFSDWKSLNDTIMGGSSRASCRSSDKGLFLEGNLVEEGGGFVSCRSPIFDKPFNLSKYSGL IIDVEGEGRTLKFAIACEKKPLSLSNLLKGDIRWVASIPTNKKGVSSIKVPFKNLEPARRAKPVRLPLRFDPTCVNRFQL LYSKFGQPGKINSGFSPGPIKVFIKSISAYL >Mature_191_residues MIPDSPPTEIAITPLIQGSEFSDWKSLNDTIMGGSSRASCRSSDKGLFLEGNLVEEGGGFVSCRSPIFDKPFNLSKYSGL IIDVEGEGRTLKFAIACEKKPLSLSNLLKGDIRWVASIPTNKKGVSSIKVPFKNLEPARRAKPVRLPLRFDPTCVNRFQL LYSKFGQPGKINSGFSPGPIKVFIKSISAYL
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20883; Mature: 20883
Theoretical pI: Translated: 10.20; Mature: 10.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPDSPPTEIAITPLIQGSEFSDWKSLNDTIMGGSSRASCRSSDKGLFLEGNLVEEGGGF CCCCCCCCCEEEEEEECCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEECCEEECCCCE VSCRSPIFDKPFNLSKYSGLIIDVEGEGRTLKFAIACEKKPLSLSNLLKGDIRWVASIPT EEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCEEEEEECCC NKKGVSSIKVPFKNLEPARRAKPVRLPLRFDPTCVNRFQLLYSKFGQPGKINSGFSPGPI CCCCCCEEECCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHH KVFIKSISAYL HHHHHHHHHCC >Mature Secondary Structure MIPDSPPTEIAITPLIQGSEFSDWKSLNDTIMGGSSRASCRSSDKGLFLEGNLVEEGGGF CCCCCCCCCEEEEEEECCCCCCCHHHCCCEEECCCCCCCCCCCCCCEEEECCEEECCCCE VSCRSPIFDKPFNLSKYSGLIIDVEGEGRTLKFAIACEKKPLSLSNLLKGDIRWVASIPT EEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEECCCCCCHHHHHCCCEEEEEECCC NKKGVSSIKVPFKNLEPARRAKPVRLPLRFDPTCVNRFQLLYSKFGQPGKINSGFSPGPI CCCCCCEEECCCCCCCHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCCCCCCCCCCCHH KVFIKSISAYL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA